result

Gene information

Detail information of g294080


Location
GeneChrStartEndStrand
g294080Scaffold_63432:HRSCAF_446518274785281349-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020255769.12.4e-15tRNA (cytosine(34)-C(5))-methyltransferase isoform X1
SwissprotQ9LZP8.13.4e-06bZIP transcription factor 53
trEMBLD6MJZ02.9e-18Transcription factor (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G75390.160.531e-1994.4AtbZIP44;bZIP44basic leucine-zipper 44

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag132971.t1; g184062.t1; g23890.t1; g255690.t1; g268657.t1; g286523.t1; g294080.t1; g331020.t1; g332697.t1; g332698.t1; g393336.t1; g397714.t1; g61739.t1
Allium fistulosumAfisC1G03462; AfisC1G03735; AfisC1G05525; AfisC2G01259; AfisC2G02600; AfisC2G04032; AfisC2G08612; AfisC3G03796; AfisC3G05087; AfisC3G05607; AfisC4G02919; AfisC4G06288; AfisC4G06620; AfisC5G02973; AfisC5G03181; AfisC6G00892; AfisC7G03720; AfisC8G03512; AfisS1301G00002
Allium sativumAsa2G04074.1; Asa3G01906.1; Asa4G04404.1; Asa5G02531.1; Asa7G05124.1; Asa8G05408.1
Arabidopsis thalianaAT1G75390.1; AT1G75390.2; AT2G18160.1; AT3G62420.1; AT4G34590.1; AT5G15830.1
Oryza sativaLOC_Os02g03960.1; LOC_Os02g09830.1; LOC_Os06g09250.1; LOC_Os06g42140.1; LOC_Os12g37410.1; LOC_Os12g37415.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00170.18bZIP_1Family12116643.91.7e-11
PF05212.9DUF707Family35441642.73.7e-11

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001067Fregulatory region nucleic acid binding
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006417Pregulation of translation
GO:0006950Presponse to stress
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009743Presponse to carbohydrate
GO:0009744Presponse to sucrose
GO:0009791Ppost-embryonic development
GO:0009845Pseed germination
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010608Pposttranscriptional regulation of gene expression
GO:0010628Ppositive regulation of gene expression
GO:0010629Pnegative regulation of gene expression
GO:0044212Ftranscription regulatory region DNA binding
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0017148Pnegative regulation of translation
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0033554Pcellular response to stress
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032055Pnegative regulation of translation in response to stress
GO:0032268Pregulation of cellular protein metabolic process
GO:0032269Pnegative regulation of cellular protein metabolic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0034248Pregulation of cellular amide metabolic process
GO:0034249Pnegative regulation of cellular amide metabolic process
GO:0034285Presponse to disaccharide
GO:0042221Presponse to chemical
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043555Pregulation of translation in response to stress
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0046982Fprotein heterodimerization activity
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051248Pnegative regulation of protein metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0080149Psucrose induced translational repression
GO:0090351Pseedling development
GO:0097159Forganic cyclic compound binding
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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