Detail information of g295110


Location
GeneChrStartEndStrand
g295110Scaffold_63558:HRSCAF_4466443298037030+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK77689.11.6e-21uncharacterized protein A4U43_C02F9500
SwissprotQ2QTY2.11.1e-14Zinc finger CCCH domain-containing protein 65
trEMBLA0A5P1FL631.1e-21Zinc finger CCCH domain-containing protein 43

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G48440.141.354e-34 142Zinc finger C-x8-C-x5-C-x3-H type family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag264308.t1; g264309.t1; g295110.t1; g295111.t1; g295113.t1
Allium fistulosumAfisC2G01789; AfisC5G03733
Allium sativumAsa5G01524.1; Asa6G03907.1
Arabidopsis thalianaAT1G48195.1
Oryza sativaLOC_Os12g18120.1; LOC_Os12g18120.2; LOC_Os12g18120.4

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00642.21zf-CCCHFamily8611034.61.1e-08
PF00642.21zf-CCCHFamily19722032.64.7e-08

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.