Detail information of g297351


Location
GeneChrStartEndStrand
g297351Scaffold_63890:HRSCAF_446976391950403327+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK79609.10.0e+00uncharacterized protein A4U43_C01F8110
SwissprotP92948.24.5e-283Protein MYB DOMAIN CELL DIVISION CYCLE 5
trEMBLA0A5P1FRK60.0e+00HTH myb-type domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G09770.171.040.01130ATCDC5;ATMYBCDC5;CDC5cell division cycle 5

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag297351.t1
Allium fistulosumAfisC2G05338; AfisC2G05340; AfisC4G04330
Allium sativumAsa6G02837.1
Arabidopsis thalianaAT1G09770.1
Oryza sativaLOC_Os04g28090.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain23124.81.6e-05
PF13921.3Myb_DNA-bind_6Domain409637.61.7e-09
PF11831.5Myb_CefFamily383623185.51e-54

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K12860CDC5L, CDC5, CEF1; pre-mRNA-splicing factor CDC5/CEF1EC:- Spliceosomeko03040

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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