result

Gene information

Detail information of g297487

Location

Gene	Chr	Start	End	Strand
g297487	CHR3	170633377	170636320	+

Sequences

CDS

>g297487.t1
ATGTTACTACCTTTGTGCCATGGCTTGCTATTGCTGGTTCTATGTTCATTTTTCTTCCCCTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGCTGATAACTTTTGGAGCATTGAAGGAATTCTTCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCATATTTTTCAATTCCATTAGAGCTACTTTACTTTGCTACATGCTCGACCTTATTCCCATTCAAATGGATTGTTATTCAGTTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTAAATGTCTTCACTTACGAGCCTCATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTCACCGCACTTGTATCATTCGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAATAAAAGCAAGGGAATTGGATCGTGAAGTTGGTATGATGAAGATGCAAGAAGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCACTGGACAGACATAAAATCTTGTACACTACTTTAGTCGAACTCTCAAAAACTCTAGGTTTAGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAAGAAAGAGATGAACCTAACTCATGAGCTGCGACAAAAAAGCTCTTCTGATCTGTATGTTCGTTCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGAATCACCAGGTGCTATAATATTGAGGCCAGATTCACTTCTTGCTTCTGCTAGCAGTGGTGGCTCTACTTTTGAATCAGGACCTGTGGGACACCTGAAGTTGTACAAACTCAATCATGAATTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCTCTCTCTCATGCTGCGGTGTTAGAAGAATCACAGTTAATGGCAGAAAAATTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAAAACGCTTTAATGGCTAGCGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATCATTGGTATATTATCTATGTTGCAGCAAGATGATATGAGCAAAGAACAAAAGCTTATTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAACCTTGATTAACGATGTAATGGAAATTTCTATGTCTAATAATGATAGATTAACTTTAGATATGAGAACGTTTAAGCTGCATTCCATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAGAAAATTGTGCCTGATGGTGTTTTGGGCGATGAAAAGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATTGCGTTAAAAATTAGTGGTTTTAATGAGGATGTAGATAAGATGGATCAGGGTTGGGTTCCATGGAAAGCAAACTTCTCAGATGGGTATATTTGTGTAAAATTTGAGATTTTGATGAAGAGAACGCAGAATGCTAACCCTACTGCATTAGTTCCAGTGTTTAGGCGCCCGAACTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGATGATGCAAGGTAATATATGGGCCATACCCAATACACAAGGTCAACCTGAAACCCTAATTCTGCTACTACAACTCCAGACCCAATTACTGGATCCAATATCCGAACCCAACGGCTCTCTCAACCGCCGCCAAATTTCTTCGTCCACCCCAATGTTCAAAAATCTCAGAGTCTTGCTTGCTGACGATGATGTTGTCAATAGAGCCGTGACAAGAAAGCTTCTTGAAAAGTTAGGCTGCCACGTCACCTCAGTCTCTTCGGGTATGCAGTGCTTAAGCTCCATTAGTACATTTGGAACTCCTCCGTTTCAACTCATTGTGTTGGATCTGCACATGGATAAGATGGACGGGTTTGAAGTTGCTGGCAAGATCCGCAAAACCAATAGCGGGTCTTGGCCTGCCATCATGGCGTTGACTGCAAGTGCAGAAGATGGTATATGGGAGAAGTGCTTGCAGTCGGGTATGAATGGGTTGATCCGCAAACCTGTTATGCTGAAGACTTTGAGAGATGAGCTTTATAGTGTTTTGCAGAATGCCTAA

Protein

Gene

>g297487.t1
ATGTTACTACCTTTGTGCCATGGCTTGCTATTGCTGGTTCTATGTTCATTTTTCTTCCCCTCATTTGCTCTCGAGATTGGCTTTCCACGCTGTAGTTGCTTTGCTGATAACTTTTGGAGCATTGAAGGAATTCTTCAATGGCAAAAAGTTAGTGATTTTTTCATAGCAACAGCATATTTTTCAATTCCATTAGAGCTACTTTACTTTGCTACATGCTCGACCTTATTCCCATTCAAATGGATTGTTATTCAGTTTGGGGCATTCATTGTACTTTGTGGACTTACTCATCTCCTAAATGTCTTCACTTACGAGCCTCATTCCTTTATGTTAATGCTAAGCCTCACCATATCAAAGTTTTTCACCGCACTTGTATCATTCGCCACAGCTATAACTCTCCTGACTTTAATTCCTCAGCTTTTGAGAATCAAAGTGAGGGAGAATTTTTTGAGAATAAAAGCAAGGGAATTGGATCGTGAAGTTGGTATGATGAAGATGCAAGAAGAAACACGTTGGCATGTTAGAATGCTTACTCAAGAAATAAGAAAGTCACTGGACAGACATAAAATCTTGTACACTACTTTAGTCGAACTCTCAAAAACTCTAGGTTTAGAAAATTGCGCTGTTTGGATGCCAAGTGAGGATAAGAAAGAGATGAACCTAACTCATGAGCTGCGACAAAAAAGCTCTTCTGATCTGTATGTTCGTTCTATTCCTATTGATGATATAGATGTTCGTGTTATTAAAGAATCACCAGGTGCTATAATATTGAGGCCAGATTCACTTCTTGCTTCTGCTAGCAGTGGTGGCTCTACTTTTGAATCAGGACCTGTAGCTGCTATTCGAATGCCAATGCTGAAAGTTTCAAATTTCAAAGGTGGGACACCTGAAGTTGTACAAACTCAATCATGAATTGGAGATAGTAGAAGTGGTGGCAGATCAAGTAGCAGTAGCTCTCTCTCATGCTGCGGTGTTAGAAGAATCACAGTTAATGGCAGAAAAATTGGCTGAGCAAAATCGAGCTTTGTTACTCGAGAAGCAAAACGCTTTAATGGCTAGCGAAGCAAGAAATGCTTTTCAGAAGGTGATGAGTCAAGGCATGAGAAGACCTATCCATTCTATCATTGGTATATTATCTATGTTGCAGCAAGATGATATGAGCAAAGAACAAAAGCTTATTATAGACACGATGTGTAAAACTGGGTGTGTGGTTTCAACCTTGATTAACGATGTAATGGAAATTTCTATGTCTAATAATGATAGATTAACTTTAGATATGAGAACGTTTAAGCTGCATTCCATGATTAAGGAGGCGGTTAGCGTTTCTAGGTCTCTTTGCGATTGTAGAGGTTTTAGGTTTGAGTTTCAGTGTGAGAAAATTGTGCCTGATGGTGTTTTGGGCGATGAAAAGAGGATATTTCAAGTGATATTACATATGGTAGGAAGTTTATTGAATGGGAGTAATGAAGGAACCATTGCGTTAAAAATTAGTGGTTTTAATGAGGATGTAGATAAGATGGATCAGGGTTGGGTTCCATGGAAAGCAAACTTCTCAGATGGGTATATTTGTGTAAAATTTGAGATTTTGATGAAGAGAACGCAGAATGCTAACCCTACTGCATTAGTTCCAGTGTTTAGGCGCCCGAACTCTGAAGGTTTTGATATGGGACTTAGCTTCAACATGTGCAAGAATATTGTGCAGGTAAAGCCTTCTACTCTTTACTTTGCTAATATATGTATTGAGTGGTATCTTTCTTGGACTAATTTTGTTGTCATTATAAATTGGTCTATAAGTAGTTTATCATAGACTTTGTAGTTTGTTCTTTAAGCAAGTGTGTTCTGGCGTTGCCATAGTTAAGCTTTAAAGTTATCAGCCCTGTTTTTGCTTCGCCATAAAATGAAATCCATTTCACATGAAACTTTATACATTAACTGATGATATTTGCTTCACATGCCTCTTGCTTGCTTTGCAGCTGTTTATATCTATCTGCTAACAACGATTGTATCACATGCCTTGGCTATTTATGACTACGAGAACAAAAACAAAACGGCTTAAAGCATCCACACACACATACTGATTTCGACGTATAGGCAAAAGAAAGTTATTAAAATGGTTTATTGTTGGGAAAATGGAGATAGTCAAAGAGTTCGTTTGTTTTTAACAGAATAAGCGCTTAATGCTGTTAATCGTTCATTGCAACAAGTTGTTCCTAAATTATCATAAATTAAACATTCCGCACTTTGTTTGTGCTTATTGAAATCCTTCATACTTGTTACCTTAGGAAAAAAAAAAAATACACTTAACAGACGAAAAATTCCAACTGAAAGCAAACACACTTAACAATAATCAGTATTTATGTTGATTATTATACAGTCGGCCTTATATTTTGAATTGGTTTTAAATTTACAGATGATGCAAGGTAATATATGGGCCATACCCAATACACAAGGTCAACCTGAAACCCTAATTCTGCTACTACAACTCCAGACCCAATTACTGGATCCAATATCCGAACCCAACGGCTCTCTCAACCGCCGCCAAATTTCTTCGTCCACCCCAATGTTCAAAAATCTCAGAGTCTTGCTTGCTGACGATGATGTTGTCAATAGAGCCGTGACAAGAAAGCTTCTTGAAAAGTTAGGCTGCCACGTCACCTCAGTCTCTTCGGGTATGCAGTGCTTAAGCTCCATTAGTACATTTGGAACTCCTCCGTTTCAACTCATTGTGTTGGATCTGCACATGGATAAGATGGACGGGTTTGAAGTTGCTGGCAAGATCCGCAAAACCAATAGCGGGTCTTGGCCTGCCATCATGGCGTTGACTGCAAGTGCAGAAGATGGTATATGGGAGAAGTGCTTGCAGTCGGGTATGAATGGGTTGATCCGCAAACCTGTTATGCTGAAGACTTTGAGAGATGAGCTTTATAGTGTTTTGCAGAATGCCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261404.1	1.2e-299	ethylene receptor 2-like
Swissprot	Q7XX84.1	1.9e-214	OsPK1
trEMBL	A0A5P1F2E3	1.9e-267	Ethylene receptor

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT3G23150.1	48.27	0.0	661	ETR2	Signal transduction histidine kinase, hybrid-type, ethylene sensor

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g297487	AT3G23150.1	781	340	16	1	729	1	769	48.27	661
g297487	AT3G04580.2	748	321	12	28	729	24	764	50.00	655
g297487	AT3G04580.1	748	321	12	28	729	24	764	50.00	655

Ortholog group

Species	Genes
Allium cepa	g297487.t1; g36560.t1; g95130.t1
Allium fistulosum	AfisC1G08036; AfisC1G08445; AfisC3G00887; AfisC3G03615
Allium sativum	Asa2G04012.1; Asa7G06525.1; Asa7G06820.1
Arabidopsis thaliana	AT3G04580.1; AT3G04580.2; AT3G23150.1
Oryza sativa	LOC_Os02g57530.1; LOC_Os02g57530.2; LOC_Os02g57530.3; LOC_Os02g57530.4; LOC_Os04g08740.1; LOC_Os04g08740.2; LOC_Os04g08740.3; LOC_Os06g38130.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	608	721	71.7	4.8e-20

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0006109	P	regulation of carbohydrate metabolic process
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009719	P	response to endogenous stimulus
GO:0009723	P	response to ethylene
GO:0009725	P	response to hormone
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010675	P	regulation of cellular carbohydrate metabolic process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032881	P	regulation of polysaccharide metabolic process
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2000904	P	regulation of starch metabolic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	MAPK signaling pathway - plant	ko04016
K14509	ETR, ERS; ethylene receptor	EC:2.7.13.-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network