result

Gene information

Detail information of g299673

Location

Gene	Chr	Start	End	Strand
g299673	Scaffold_64193:HRSCAF_447279	19238	25260	+

Sequences

CDS

>g299673.t1
ATGGAAAGTAGAGGTAATAATCATAATCTGCAAGGGCAGCAGATTAATAATCAAGAGAAACAAATTTCTTTTGGGATGATGCAGCCTTCTTCTTCCATGCAAGGAAATTTCAACATAAACAAGGAATCGGGTGCTTATGATCTAGGAGAACTAGACCAAGCCTTGTTTATGTATCTTGATGGCCAAGATCAATCTTCAGTTCAAGAACAAAGACAAACTTTGAACATTTTCCCATCTCAGCCAATGCACGTAGAGCCATCAACCAAGGTTGGAATAAGTTTAGGGTCGCCAGCAAGTAGTGGGTCTAAAAGAGCATTGGAGCCATCAATGGAGTTAGGAAACTCAAGAAATGGCATTCTGAATTCATCGACTTTATCCGAACCCGCGAAAGAAACGAAAGCAGCCATCAAGAAGGAAGGGAGCAAAAAGGGAGCACAGTCAAGTTCAGAACATGAAGGGCCCAAAACACCAGATCCAAAAACATTGAGAAGGCTGGCACAGAATAGAGAGGCGGCTAGGAAAAGCAGGCTTAGAAAGAAGGCTTATGTTCAGCAACTAGAGACAAGCAGAATCAAATTAACTCAGCTTGAACAAGAGCTTCAGAGGGCAAGAGCGCAGGGAGTACTCTTTGGTGGTGGAGCTCTTCTTGCAGACCAAGGACTTCAAGCAGGCTTAGGTGGTCTTACCTCTGATGCGGCGGTGTTTGATATGGAATATGGGAGATGGCTTGAGGAACACCATCGACTAATGTGCGAACTTAGAGCAGCTGTTCAAGAACATCTACAAGAAAACGAGCTTCGAATGTTTGTGGACAACTGCTTGCATCACTATGATGAAATGTTCAATTTAAAGAGCATGGCTGCAAAATCCGATGTTTTCCATCTTATTTCTGGAATGTGGAAAACTCCAGCCGAAAGATGTTTCATGTGGATGGGAGGTTTTCGGCCTTCTGAACTAATTAAGATAATTCTGGGCCACATCGAACCTTTAACGGAGCAACAAATACTAGGGATATGTGGATTGCAACAGTCAACACAAGAAACTGAGGATGCGCTTAGCCAAGGGCTAGAATCTCTAAACCAATCTCTTTCTGATACAGTGGCATCAGATGCATTGAGCTGCCCTTCTAACATGGCCAATTATATGGGGCAGATGGCTACAGCCATCAACAAACTTTCCACTCTCGAGGGCTTTGTTAGACAGGCGGATAATTTGAGGCAACAAACACTCCACAGACTACACCAAATCTTGACCACGCGCCAAACTGCCCGTTGCTTTTTAGCAATTGCTGAATACTTTCATCGCCTGCGTGCACTGAGCTCACTCTGGCTTGCTCGACCAAGGCAGGAATAA

Protein

Gene

>g299673.t1
ATGGAAAGTAGAGGTAATAATCATAATCTGCAAGGGCAGCAGATTAATAATCAAGAGAAACAAATTTCTTTTGGGATGATGCAGCCTTCTTCTTCCATGCAAGGAAATTTCAACATGTAATCAGTTTTCAATTTTTTTTTTCTATTCGGTTCCTGTTATAATTTTTTAATTTTGTTGCTTTTATTTCTTTTCTTTTTTAGCATGAGATGAGATCAAGTGAAATCTAGCATAGAGAAAACTTATGTCATGGATTATTATTTTCTTACTTCATGCATGGTTTTTAATCTTGCTACTGTAATTTAGCTAGGTCATCATCCATACTTTATTTTCTATTTTCTTTTTCACAACTCAACCAAGTGATCATTTCATTTCTTTCTTTTCTTTTTAATTTTATTTTATTTCACATACATCTTTGTGAAAGGATACATAGACATAGATGAAAAGTTGTGCCTTGATCACCGTATATGTATCTATATAACTTTTTGATCCAAAGAAATATAGAATTATGTTATGTATCAAATTCACTATTTCTTAAAACAATAATACAGTTAATTAGATTCTTTTAGAATACCTTTTCAGTAAAGAAATTTGGAATTTTGGTTTATTCATAGTTAGCTAAGATATCAACAATAATAATAGATGAAACATAAATTATAAAAGGAGTTCCACGTAACTAACTGTTTGACTATCTTTGTTTATGGAGCAATATGATCCAAGATACATTACTCTTCATATTTTGTATTTAAACTCTCAACTCCGCATAGGTTCACATCATACTGCATATACATATGATGAACAAAAACCTTCATTCATGAAATAAAATTTACATTAGAAGTATAATATGTCATTGAAAATACTATACTTATTATAAGCTTAATCATATCTCATTCAAATAAGAAAATTACTAACTGTTTTAGTTCATTTATATTTTTCCGTCAAACAAAAGCAGAAACAAGGAATCGGGTGCTTATGATCTAGGAGAACTAGACCAAGCCTTGTTTATGTATCTTGATGGCCAAGATCAATCTTCAGTTCAAGAACAAAGACGTGAGTTTAGCATATATTATATAAAGATGTGCATACATGCATATGAATATATTTTAACAATAAGTAATCGTGTTTGATTAGCTTTATATACATATCACCAGAGACACAGTAAATATACATCAGTAATTAGCTGCTGAGATTATCCAGTAAAAGTTTCTTTATAGTCACGATAATATCATGTCTAACAAATTCATGTGCATAATTTGACCACAGAAGTACAGAATCTGAAATCTGATTTTTTTGGAATATGGGAACCAGTTAGTAGCAGTAATGTATGTTTATTCATTTACAAATTTTGTACAAATAAAAATGTATATCAACTTTTTAAACAGTAAAAGTATTCTCTTGTGCTAGACTGTGACATGTAACAAACTAGAGAGGACACTCCATATCATGATCCCTCTGAAAAATTCTTCAAAATGAAAATACAGCATATATTCTGTTTTGTATGGCAGAGAAGCTCCAAATGCATGATGACTTTCCCCTTTTCTCTCTCTGTCCTTTATATGAATATTATATTTTATTACTGCAAGAGAATGGTGGTGCCTTCAAATACATCAAATTTGTGTATGTGTATATAAGCTAAACTTAATAAATGCATTGGGCTTTATATGGCAGAAATTAATGCAGTCAATATTTCATGTATGCAGAAACTTTGAACATTTTCCCATCTCAGCCAATGCACGTAGAGCCATCAACCAAGGTATATTATTTCGTAATACGGCTATACTATTGCATCCATCTCTTGATAAATATTGTATAAATTGACTAATATTTGGGGTGTTTATTAATTTTAGGTTGGAATAAGTTTAGGGTCGCCAGCAAGTAGTGGGTCTAAAAGAGCATTGGAGCCATCAATGGAGTTAGGAAACTCAAGAAATGGCATTCTGAATTCATCGACTTTATCCGAACCCGCGAAAGAAACGAAAGCAGCCATCAAGGTTTTTTTTTTTTTTCCCCTCTTTTTTTTCTTTCTTTTTTCCTTCTTTCTTATTTTTCTTTTATTTTTTGAGAATAGAAACTCCAGTTAAATTGATTTTGTTGCAAGTTATTAAATGTTTATATGGCGTTTATGTTTACAAAATGCAGAAGGAAGGGAGCAAAAAGGGAGCACAGTCAAGTTCAGAACATGAAGGGCCCAAAACACCAGATCCAAAAGTTAGTGCGCTTTCAATTTATAAAAGATACTTACATAAATTATAGAATAAGCTTTATGTGTTCATCTACAACTTCATGACGTGCAGACATTGAGAAGGCTGGCACAGAATAGAGAGGCGGCTAGGAAAAGCAGGCTTAGAAAGAAGGTTACATGGTGTTCTTCTACACACACACACACAAACACCAACACTATAACCTATCAGAAGATAGATATAATAGTTTATCTATTTTGTGCAAAATCAGGCTTATGTTCAGCAACTAGAGACAAGCAGAATCAAATTAACTCAGCTTGAACAAGAGCTTCAGAGGGCAAGAGCGCAGGTATATTTCCATGTAGCATTAACAAATAGAATTATAATATGTAACTATTAAACTATTTTTCAACCACAGATGAAACATTCAAAATGAATAAACATGGAAACTATACCAGACATATATAGTATTAAAAATGTTTAAACTGCATATACTAGGGAGTACTCTTTGGTGGTGGAGCTCTTCTTGCAGACCAAGGACTTCAAGCAGGCTTAGGTGGTCTTACCTCTGGTATGTATAAATACGACATTTTCACATATGGGGATATATTCATAACATATATATTTAAACTAATACTTTTGTGGTACAAATAATTTGAAAGATGCGGCGGTGTTTGATATGGAATATGGGAGATGGCTTGAGGAACACCATCGACTAATGTGCGAACTTAGAGCAGCTGTTCAAGAACATCTACAAGAAAACGAGCTTCGAATGTTTGTGGACAACTGCTTGCATCACTATGATGAAATGTTCAATTTAAAGAGCATGGCTGCAAAATCCGATGTTTTCCATCTTATTTCTGGAATGTGGAAAACTCCAGCCGAAAGATGTTTCATGTGGATGGGAGGTTTTCGGCCTTCTGAACTAATTAAGGTCATTTTTATACCCTCCAACTTAGTTATTAATATGTAAAAAATCAAATAATAAAAGCAGCATATGCGTATATTTGTATAAGACTATATTAGCTATATGAATACACGTGCGCTTAACATTTTTCTTTGGATTTTTATGAGAATTATTAATAGATACCCAATAATCTTCATTTAATATATTAACTGAAAGTATATTGAATATATATTGCTACTGTTTATAGTATAAAGATAATATTTACCAATTATGTTAAATCTAAGGCAAGTCAATTAATATATGTATATATTTTCAAAGGCCATTCTTTATTTTAACTGTTTATAGTATGAAAATTATAACTTACCATTTATGTTTAATCTAAGGCAAGTCAAGTTATAATATATGTATATTTTTTTAAATGCCATTCTTTATTTGGAAAAACTTAGAAGTAAAAACATTGCTAATTAAGAAATCGAAAAGCTTGACAGGATTACGTATCAGAATAGCTTCTTGACCCTTTTATTATTTATTAAGTCATACATGAAAGAGCATAAAGTACATTATCTATTGTCTTTGAATGTATTATGAACAAGAATTTAAAATGTACTGACTTTAATTAGCTAACAGTCTTACCTAATTCATCCAAACGCATTGCAAGTGTAACTTGCTTCTGTTGAATTCCTACTAATGAGATAATTAAAAACAAGTGTATCCTTCATAAGTTAATTCATTAAACGTTATGAATAAAAAAACACTAGGAAGAAAAAAAAATAAAGTGTCCAAATTGTGGAAATGACAAATGAAAAATATTGTACAGCCAGCAGTTTGTTGGAAAGTCCCTATTAATGGAGAAGGTATAAATGTTTCAATCTTTTAATAGAGACAAGTAGATGTTTACTTAAATGATTTGCTACACAAAAGACTTGACACGATCATTCATTCTTTCTTAATTTTCTGTCATAAAGTAATATTATGGAAGAAGAGCTGGATGGAGAAAGCTTTCCTCATACAGATACTTATAGGCCATACCTTAACATTTTCAAAATAAAAGTGATGTTTAATTCTGCATGAAAATGGAATATTGATGAACCACAATTTAAATTTATGTACTATTATTAATAGGTATGGTCCTTTATCCAATTTTGAAATCTTTGGTGCACAACATTGATATAAATGGTTCATAGGATAATATATGCCATCTATACATTTATATATGCATGAAAAGATATAAACTTACACACATATATGTATATACATACATAAATACATACATGCATGCATGTATGTATGTATATGTTAACAAGCATGCATACTTGGTAAATTTTATATAGCTTTAACATTTGCTGATTTGTAGTACTATATATCTTATTGTCCAGATAGATAAGGTTTTATCTTCATAAATTTTGTTAGTTTATGCTAAATTTAGTGTCATTTACAAAGTCAACCAATTACCAAGAATAATAGAATCATTACGGATGAAAATGAATTTGATTTTCTTGTTATATGTCCTCTTTTATTAATTTTTTAAGAACAGTAGATAAACCTTGATATTAGGAACAAACGCGTCTATGAAATAAATCTCTCCAACAAATTAGGCTTACAAGAATGCAGTAAATCCATTCTAAGCAACTTATATTTACACTACGGATTTTCTCTGCTATAAAGAATCTGCATGCATACTCATTTATTTCCATGTTTACTAATATATATGTTGACAAAATGTAGATAATTCTGGGCCACATCGAACCTTTAACGGAGCAACAAATACTAGGGATATGTGGATTGCAACAGTCAACACAAGAAACTGAGGATGCGCTTAGCCAAGGGCTAGAATCTCTAAACCAATCTCTTTCTGATACAGTGGCATCAGATGCATTGAGCTGCCCTTCTAACATGGCCAATTATATGGGGCAGATGGCTACAGCCATCAACAAACTTTCCACTCTCGAGGGCTTTGTTAGACAGGCAAGATTTATTTTACTTTCATAACACACTATTACATTCATCAAATTAAGTATCTTTTTTGTTCATGATATAAAATGTAGCAGAAAAATTAGTTGATATCCTGCAATTAGTAGGTGATTGACCTAACAAACAATAATGAATTTGTGAACTAATTCACAATAAATAGTTGTTAATCATATTGTCATTTTTCTGAGAATATTGATTTTATGATTATTACTCAAAGCCTGTAAAACAAAATACAGATATAATTTGTTTTAGTTAAGAAAACTGTTAAGGTTTTTTATGTAAATATAAATGGAAATGTCATACAGCTCATGAATTTCGTTTGGGTAGAAATATAAACATTGTTCTAGATTAGTTTATATATCGCTGACTAAACATACCTACTCCATGATCACATATAGCAGCTACAGAATAAACATATGAAGGTTGTTATCAAACTCATAAAAGATGAATATTTTGATATATCATCTGATTCACCAAATATCAATTTCGTGATCGCCTTGGTGAACATCATTTAGTGGCCAAAAATATCATATCATTAATATTAGCTTCTAGAACCCGGAAACAGATCGTCAACATTTACAATGCTTCTTCTAACGAAACATCGCGCTACTTTAATTTCAACATTCATCCCCTATTGTCTTTATGTTTAGGTGAAGTTAAGCTCAATGATTCCAATAAAGTCAATAAGGGTTTCACTATTTCAATACAGATATTGACAGTACTATTTTCCAGTCCATATTTGAGCAATGTGAACATCTCTAAATTTTAAGATTCTATTAAGTATACATACATGTAAACAATGACCTTACCGAATGCAGGCGGATAATTTGAGGCAACAAACACTCCACAGACTACACCAAATCTTGACCACGCGCCAAACTGCCCGTTGCTTTTTAGCAATTGCTGAATACTTTCATCGCCTGCGTGCACTGAGCTCACTCTGGCTTGCTCGACCAAGGCAGGAATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267914.1	2.2e-203	bZIP transcription factor TGA10 isoform X2
Swissprot	Q52MZ2.1	3.3e-172	Protein TGACG (TGA) motif-binding protein 10
trEMBL	A0A6I9SGY0	1.2e-184	bZIP transcription factor TGA10 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G06839.3	61.64	1e-151	532	bZIP65;TGA10	bZIP transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g299673	AT5G06839.3	451	127	11	34	450	21	459	61.64	1e-151	532
g299673	AT5G06839.1	444	105	8	34	450	21	416	59.46	5e-144	507
g299673	AT5G06839.2	445	105	9	34	450	21	417	59.33	1e-142	503

Ortholog group

Species	Genes
Allium cepa	g299673.t1
Allium fistulosum	AfisC7G00649
Allium sativum
Arabidopsis thaliana	AT5G06839.1; AT5G06839.2; AT5G06839.3
Oryza sativa	LOC_Os09g10840.1; LOC_Os09g10840.2; LOC_Os09g31390.1; LOC_Os09g31390.2; LOC_Os09g31390.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00170.18	bZIP_1	Family	160	200	34.1	1.9e-08
PF14144.3	DOG1	Family	250	323	115.5	8.3e-34

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0002237	P	response to molecule of bacterial origin
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0007165	P	signal transduction
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0007154	P	cell communication
GO:0046983	F	protein dimerization activity
GO:0007275	P	multicellular organism development
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0009908	P	flower development
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022414	P	reproductive process
GO:0023052	P	signaling
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0042221	P	response to chemical
GO:0042803	F	protein homodimerization activity
GO:0043207	P	response to external biotic stimulus
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048367	P	shoot system development
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048443	P	stamen development
GO:0048466	P	androecium development
GO:0048608	P	reproductive structure development
GO:0048653	P	anther development
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0071588	P	hydrogen peroxide mediated signaling pathway
GO:0080090	P	regulation of primary metabolic process
GO:0090567	P	reproductive shoot system development
GO:0099402	P	plant organ development
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K14431	TGA; transcription factor TGA	EC:-	Plant hormone signal transduction	ko04075

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network