result

Gene information

Detail information of g299712

Location

Gene	Chr	Start	End	Strand
g299712	Scaffold_64202:HRSCAF_447288	108108	114330	+

Sequences

CDS

>g299712.t1
ATGGGTAACTGTGGCACTAGAGAAGATTCTGCTGTAACCGCTGCTCATGCTCAAGCATCCAATATTGCAGTTCAGCAGCTAGGGCAATTGCTTAAAAACAGTCCTTCGGAAAGAAAACACAACCGAACTTTCTCAGATATAAGCGACTCTTTGATCCCTAGAAAAATTGAAGACTCGAAAAACATTGCAATATATTGTAATGTGATTGCTTTCACTTTGTTTGAGCTTGAAACCATCACGAAAAGTTTCCGCTCAGACTATGTTCTTGGTGAAGGTGGATTTGGAACAGTATATAAAGGTTACATTGATGAAAATGTCAGGGTTGGACTCAAATCTCTTCCTGTAGCTATTAAAGTATTAAATAAAGATGGCCTTCAAGGACATAGAGAATGGCTTACAGAGGTTAATTTTCTTGGGCAGCTAAGACACCCCAATCTAGTGAAATTGATTGGTTATTGCTGTGAGGATGATCATAGGTTGCTAGTTTATGAATTTATGTTCCGTGGTAGCTTGGAGGACCACTTATTTAGAAAAACTACTGCTCCGTTATCATGGTCAACAAGAATGTCAATCGCACTTGGTGCTGCCAAAGGGCTTGCATTCCTTCACAATGCAGAAAAACCTGTTATATATCGTGATTTCAAGACATCGAACATCTTATTGGATTCTGATTATACAGCAAAACTTTCTGATTTTGGGTTAGCAAAAGCTGGACCAGAAGGTGATGAGACTCACGTATCTACAAGGGTTATGGGAACTTATGGCTATGCTGCACCAGAATATGTTATGACCGGCCATTTAACAGCGAAAAGTGATGTGTACAGCTTTGGCGTTGTCCTTCTAGAACTCCTAACAGGTCTGAAATCTGTAGACAAAACCCGGCCCATGAAAGAGCAAAGCTTAGTGGACTGGGTTCGAACAAAACTCAACGACAAGAAAAAGTTGCAGCAGTTGATTGATCCAAGACTGGAAGAGCGTTACTCGGTTAGAGCAGCTCAAAAGGCAAGCAGCCTTGCCTACTATTGCCTAAGCAACAACCCCAAAGCGAGGCCATTGATGAGCGACGTGGTGAAGACTCTTGAGCCTTTGATAGGGAAAACAAGCGAACCGAATGAGGGTTCGGCGTTACCTTTACCGAACCCTAGAATTCACCATCGTAGGTTTCCTGGTAATAGTATGGGATGCAGAGCTAGCCCCAGCTCTAGTTGCTCTCCGGGTCCGGTGCCTGCATGCAGAGTTAACTGA

Protein

Gene

>g299712.t1
ATGGGTAACTGTGGCACTAGAGAAGATTCTGCTGTAACCGCTGCTCATGCTCAAGGTTTCTCGTTTCACCTTTTTTCTTAGATCTGATACAATTTTGGCAATTGGACCTTTTTTGCTTTTAATTTCGTAAATTATATGAATTTTTTATGATATTTTGGTCATTCTTTCCATGTTATTGTCCTAAAACTTGTTTAATTTGCTTATCAACGACATGTATAATAAATGCTGTATATCATTTGACGGGGTTTACTTATTTACCTATGCTTATGCTTCCGATGTAATAATCATAAAACTATGGACCAATCATAAAATTGTTCTGCATTAGAGAAAAAGCTTTAAAAATTAGATTTCGATTCTGGATTTTCAGCTTATGCTAGTTGTACTGTGAATTTTACTGTTCATAGCAGAAGATTTTTGCTGATTACAGATTTGACCAATTTACAGCATCCAATATTGCAGTTCAGCAGCTAGGGCAATTGCTTAAAAACAGTCCTTCGGAAAGAAAACACAACCGAACTTTCTCAGATATAAGCGACTCTTTGATCCCTAGAAAAATTGAAGACTCGAAAAACATTGCAATATATTGTAATGTGATTGCTTTCACTTTGTTTGAGCTTGAAACCATCACGAAAAGTTTCCGCTCAGACTATGTTCTTGGTGAAGGTGGATTTGGAACAGTATATAAAGGTTACATTGATGAAAATGTCAGGGTTGGACTCAAATCTCTTCCTGTAGCTATTAAAGTATTAAATAAAGATGGCCTTCAAGGACATAGAGAATGGCTTGTAAGTGATCAATACAGCTTTCCATAATACTTTTGCCTTAGATTTGGTGAACTCAATGATGCATTTCTTTGTTTATACTTACCTATAAATTTCACAATAGAATTATTAGCTGCAAATTAGCTAGTAATTACAACTGTAGCATGTTATATTCTTTAACTCTATGTAAACCAAATTTTTGATGTTATGTTTGGGACAATCCATACTGAGCTATGCTTAAAAAATTAGTTAGTAACTACCTATGTGCAAACATGAAACAAATGGAATGTGCCTTCCACGTGGATTTTGACAGCATGCGTCGTATTCTCTCTTACGAGTAAGTACCTGTCAAGTAAAAGTTGGTTAAGTATATCATTTTTGACCTATTCAAAGGTTTTGAAATTTCCACCTGGTGTATAACAGTGTAAATTAACATGATTTTAGTCCGATTGTGAATGGTTTGTACATCATCATAATTAAGGCATGCTAGAGTTTGTGTACATATCTGTTACTTGGTTCGATTTATATGTTTATATGGTGTATGGATTGATACTGGAATTATGGCAAGTTTTTGACAAATCTTTATCTTTTGTGAAGTCGGGACTACTTAATTACCACTGTTCCAACTGATATATGTTGCACAAGTGCCCCCAACTACTTTGATTGCACCTGCCTTTTCCTATTGTATATTAGCTCTTGTAATATTGTGAATTAGGAATGTTAGAACCTAAATTTTTATATTCTATAGCACTGTATACACTTGGTGTTTGTATATGATAAGCCTCTTTGAGTTCTTGTCATAACTTATGTTGGGTTTCTGATTAATTTATGATTTGGTTTGTAGCTTGTAGCTTACACAAGAAATATGAAAATGTTGTGCATGCTATACAAAGTTGTGCATGGAATGTTTATAATTCTAAATTTGGTACCTGTGTATTAAGTTATTTCTTTTACTGATCATTTGCAGACAGAGGTTAATTTTCTTGGGCAGCTAAGACACCCCAATCTAGTGAAATTGATTGGTTATTGCTGTGAGGATGATCATAGGTTGCTAGTTTATGAATTTATGTTCCGTGGTAGCTTGGAGGACCACTTATTTAGAAGTATGTAATTCTTTTTTAACACTATAGATATTTATAGTTTTGTTTGCCAGAATGACAACTCTTGCGGTTATAATCAATTCCAACGAAGATCTCTCTCTCACACACGATATGTGTGCGTGGGGGGGGGGGGGGGGGTGTCAGGATAATAATAAATGCTTAAGACTCGAGGTATACTTTGATATAGTTCTGTATGCCTGAAGCATTTTGCGTACTGATGCTGAAAGTCTATTTGTATTTGTTCTGCAAAAGTTGGCTTTTGAGTTGTGTTAAGCCACTAGAGTTTTAGAACATGTGATATTCCTGGACACTTGGTTTGGCAAAATAACAGACATTAGCTAACTAAGAACACCTTTTTTCAGTTTGTAACTAGAATATTATAGTTTATGGCATGCTGTTGCAAGGACTGCTTTGGCATCATGGTATGTATGATGAATTAGTCCATTCACTAGGATTACTTTTTATGAGGTTTGATCTTGTTTTCTTGGAATATCTATTTTTAGCACTGCAAAGTGGAACCACTATTCTGTGTCGCCTAGATCACTGTAGTGTATATACTTTGCAGAAATATGTCAAAGCACATATATGCATTCTATATCATATTCTTTTACTTGTGCATGTCCATGAGTATCTTAAAAGAGTTATGATTTATTCACGCTAGAATTTGAACTGGGTATCATACTTTACTTTGATCCAAAATATCAAATGAATGGTATCAGTGGCCAACCATACAGAAATCGTGTTGACAATCTACTTCAGTTACTTTTGGTCCAATATTATTAATTTAACCTTTTTCTTGTGGCATCATATTATTAATTTCTACACAAACGCAAACATCACATTTTTGAAAGTATCCTGACGTTGCAGTCTTGCAGTATGGCTATTTGATTTAAACTGAAAGATGGTTGCTTTCTCAAATGAGTCGGAAACAAAAATTTGAATATAGGCATCAAATCCATCTTGATGCTGCACAAAAAAAAAAAAAATGGTCATTTTTTAAACAAGGATTGTTCCATCTTGATGCTGCACAAAAAAAAAAAAAAAAATACTATCAAGTGGTCATTTTTAAACAAGGATTGTTCTAATTTGTCAGCTGCAGAGGAATCTATCTTATGAAAATTTACTACTTCGCATTTCAAAATATGTTTAAGCAAAAAATTACTACTTCGCATTTCAAAATATGTTTAAGCAAAAAATTACTACTTCGCATTTAATTTCAGATTCTGATTCTACCGCGTGAGAAGCACTTTTGCGCACTTAAGCTGTCACTTATTAGCGCTATGCCCCACGTGTACCATGGATATACATTAGTAAATATAACTCATAAAATCAAAATATAAAAATTAATAATCATTGAAATATAATTAAATAACTATATGTATGTATGTATAAAATTCGTGATGACCTCGTACGAAAAGAAGATCGTAGATTTCTTCAACTTCTTCATATTGTTTTGAAATTTTCGTGTACAAAGAATTAGACGTTAATATTAGGTTTCTCAGTGTATTATGAGAGTATTATAATAAAGAAAATATCATACTACAAAGTTGATAACAGTTCTGGTGCCTTCAGAAAATAAGTGTTACTTAAGAACCATTAATCGAGACGATAGCTTTGATGCCTCTCCTTGCCTTTTGCTTAACATAACAAAGATTAGGATCGAATCAGGAAACTTCGCACTCAAACCATTCTACATCATTTTTGGGGTGTTGTCATTCGATAAATTGAGTGATGATATTCTGAGCAAGACTGAAGCTTCTTTCTAATAATCTGAAGAGGCCTAACAGCTGTGACCATTATCATTGCACATGAATGTATACTCGCTCTAGTTTAAACGATTATATTATCATCTTAGTCGTGAAGATGTTATTTTTTTTTGATAATACTGTATATTGCAATCAAAATTATAGTTGTTTTGCTCAAAGTAAGTTCTTTTAGTGATAGGGCATCACAGTAATCATTATATTGTAAACAAAACAAGTCTTTTATGATTTCTTACATTTTGGGGACAAAGTTTAGTCCAAGTTTATGGGTACTTATTTAATTTTATCTAACTTATCTATTGGTCATTTTACCGAGTTGGGAATCAAATAGTATTTTGAGATTTGGGATCCTTGGTGCAATGTTGCCATTGAGGACATGGGATTTGCAATTTGAATGAAATAACAAATGATTCATCTATTAGAATGTGGAAACTTTTACAGTTTTATTCTTAAAAACATGTTAACTACTATACCGGTATTTTTCATTAATTAGTGTGTATTGTACATGTTACGTAATTAAAAAAGAAAAGGAAAACATATTGCATAATATACGAAAACATCAACAAATAATACACACACATACATACATACATTGCAGCTCTCTCTTCCTATAATCTCTTCGTCCTTTGCGTTTATATTACATCTTTGATCAGTAGAATGATTCTGCAAAGACTGCAATCTATTTTTTATTTGTTGCTGTCAATAATGTGCTGCAACAATTAGGAAAGGTAGAAATCAGCTAGCATAAATTTTATTGAAGTTTCGGTTTACTTTTACATATCTTTGTTCACCTGTAATTTGTTTCTTTGATTATCAACTCAGAAACTACTGCTCCGTTATCATGGTCAACAAGAATGTCAATCGCACTTGGTGCTGCCAAAGGGCTTGCATTCCTTCACAATGCAGAAAAACCTGTTATATATCGTGATTTCAAGACATCGAACATCTTATTGGATTCTGTAATCAAATATTATTATCACTCTGCTTCCTCTATTTATGCAAAACAAAATTCATCAAATATTTTGTAGCATTTACTGTACATACTGCTAATATATCAAATATTTACAGGATTATACAGCAAAACTTTCTGATTTTGGGTTAGCAAAAGCTGGACCAGAAGGTGATGAGACTCACGTATCTACAAGGGTTATGGGAACTTATGGCTATGCTGCACCAGAATATGTTATGACCGGTAAATGTTTGGTCTGTTTTGTTTGATAAGAAAATAACAAACTAATTTTTTTATTTATTGAACAGTGATTAGATCAGCAGTATTATATTGGAAAAACAACCGTGATCCTTAGAAAAGAAACATGAAGATAAGATAAATATTGGTGAAATGAAAATGCTAAGGTGGATGATGCTAAAAAGAATTACAAATGAGAATGAAACAAAAATTAGAATTGACATGTACAATGAGAAAAAATAGGGAAAATAAAAAGGCTTAGATTGTCTGGATACATACAAAGGGATGGCGAGGAGAGCTGAAACTTTTTACATAGGCCTGTCAATGGATACTGGAAAAATCCAAAATTTGTCCGCATCCGTATGCGAAAAGCGAATCAATATCCGAATCTGAATAACCGGTTATGGAGTATCCACATCCAGAAATTATCCGTCCGATTTTTGTCAAGATTATACTTTATATTTTGTGTATTTTAGTATAATGAAAAACGTGTTTATTTATTTTATATGCATTTAATGGATATTAATTGTTCAAAACTATTTATTATTATCATATTCGTTTATTTTTCACACTTGTACAGTCAATGAAATTGAAAAAATAATTATGCTAAATCAAGATTTTTTATTTATATTTCTCGATTTATTAATCGTTAACGGATAAGATAATTACCCAATATCTGTCCGTGTCCGTAGATATGCGGATAACAGATATTCGAAAATAATTTCGGATACGGATACAGACACGACATCATCCGTATTCGAAAATATCCATCGACGGACCTATTTTTACATAGAAGAGAAAAGACATAATCGCGTTCTCTCTCTTTACGTTCAATTCTAATGCAAACCTGCAACTAGATGATATGAACTACTGCTACAAATCTCTGTAGTCTAAGCATATTGTTAAAGTGTGACTACCATGTATTATATGACTAGTGCTTACATTTCAATCTTTTAATCAGGCCATTTAACAGCGAAAAGTGATGTGTACAGCTTTGGCGTTGTCCTTCTAGAACTCCTAACAGGTCTGAAATCTGTAGACAAAACCCGGCCCATGAAAGAGCAAAGCTTAGTGGACTGGGTTCGAACAAAACTCAACGACAAGAAAAAGTTGCAGCAGTTGATTGATCCAAGACTGGAAGAGCGTTACTCGGTTAGAGCAGCTCAAAAGGCAAGCAGCCTTGCCTACTATTGCCTAAGCAACAACCCCAAAGCGAGGCCATTGATGAGCGACGTGGTGAAGACTCTTGAGCCTTTGATAGGGAAAACAAGCGAACCGAATGAGGGTTCGGCGTTACCTTTACCGAACCCTAGAATTCACCATCGTAGGTTTCCTGGTAATAGTATGGGATGCAGAGCTAGCCCCAGCTCTAGTTGCTCTCCGGGTCCGGTGCCTGCATGCAGAGTTAACTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020276461.1	7.3e-206	probable serine/threonine-protein kinase PBL8
Swissprot	Q8GXZ3.1	1.1e-169	PBS1-like protein 8
trEMBL	A0A6I9RRX0	1.3e-191	probable serine/threonine-protein kinase PBL8

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G01020.1	73.18	2e-171	598		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g299712	AT5G01020.1	425	86	6	1	413	1	409	73.18	2e-171	598
g299712	AT2G05940.1	293	82	0	71	363	75	367	72.01	2e-123	439
g299712	AT2G07180.2	313	107	0	51	363	58	370	65.81	3e-122	435

Ortholog group

Species	Genes
Allium cepa	g167515.t1; g299712.t1; g419603.t1
Allium fistulosum	AfisC2G06921; AfisC3G02487; AfisC4G04559
Allium sativum	Asa2G02009.1; Asa5G06051.1
Arabidopsis thaliana	AT5G01020.1
Oryza sativa	LOC_Os11g02830.1; LOC_Os11g02830.2; LOC_Os12g02810.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	88	360	165.5	1.2e-48

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network