Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g299780 | CHR4 | 236020600 | 236037877 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020277398.1 | 1.5e-88 | uncharacterized protein LOC109851591 isoform X1 |
Swissprot | Q5XF79.1 | 4.9e-04 | PBS1-like protein 18 |
trEMBL | A0A8N4F1F1 | 7.6e-71 | uncharacterized protein LOC105053107 isoform X4 |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G72650.1 | 37.32 | 2e-55 | 213 | TRFL6 | TRF-like 6 |
Species | Genes |
---|---|
Allium cepa | g299780.t1 |
Allium fistulosum | AfisC4G01186 |
Allium sativum | Asa4G01065.1 |
Arabidopsis thaliana | AT1G17460.1; AT1G17460.2; AT1G72650.1; AT1G72650.2 |
Oryza sativa | LOC_Os02g53670.1; LOC_Os02g53670.2; LOC_Os02g53670.3; LOC_Os02g53670.4 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00249.28 | Myb_DNA-binding | Domain | 373 | 420 | 26.8 | 4e-06 |
Accession | Ontology | Name |
---|---|---|
GO:0051276 | P | chromosome organization |
GO:0000228 | C | nuclear chromosome |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0000723 | P | telomere maintenance |
GO:0000781 | C | chromosome, telomeric region |
GO:0000782 | C | telomere cap complex |
GO:0000783 | C | nuclear telomere cap complex |
GO:0000784 | C | nuclear chromosome, telomeric region |
GO:0008152 | P | metabolic process |
GO:0003674 | F | molecular_function |
GO:0003676 | F | nucleic acid binding |
GO:0003677 | F | DNA binding |
GO:0003690 | F | double-stranded DNA binding |
GO:0003691 | F | double-stranded telomeric DNA binding |
GO:0005488 | F | binding |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0005694 | C | chromosome |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0006139 | P | nucleobase-containing compound metabolic process |
GO:0006259 | P | DNA metabolic process |
GO:0006725 | P | cellular aromatic compound metabolic process |
GO:0006807 | P | nitrogen compound metabolic process |
GO:0006996 | P | organelle organization |
GO:0042162 | F | telomeric DNA binding |
GO:0008150 | P | biological_process |
GO:0009987 | P | cellular process |
GO:0016043 | P | cellular component organization |
GO:0031627 | P | telomeric loop formation |
GO:0031974 | C | membrane-enclosed lumen |
GO:0031981 | C | nuclear lumen |
GO:0032200 | P | telomere organization |
GO:0032991 | C | macromolecular complex |
GO:0032993 | C | protein-DNA complex |
GO:0034641 | P | cellular nitrogen compound metabolic process |
GO:0042592 | P | homeostatic process |
GO:0043170 | P | macromolecule metabolic process |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043228 | C | non-membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0043232 | C | intracellular non-membrane-bounded organelle |
GO:0043233 | C | organelle lumen |
GO:0043565 | F | sequence-specific DNA binding |
GO:0044237 | P | cellular metabolic process |
GO:0044238 | P | primary metabolic process |
GO:0044260 | P | cellular macromolecule metabolic process |
GO:0044422 | C | organelle part |
GO:0044424 | C | intracellular part |
GO:0044427 | C | chromosomal part |
GO:0044428 | C | nuclear part |
GO:0044446 | C | intracellular organelle part |
GO:0044454 | C | nuclear chromosome part |
GO:0044464 | C | cell part |
GO:0046483 | P | heterocycle metabolic process |
GO:0060249 | P | anatomical structure homeostasis |
GO:0065007 | P | biological regulation |
GO:0065008 | P | regulation of biological quality |
GO:0070013 | C | intracellular organelle lumen |
GO:0071704 | P | organic substance metabolic process |
GO:0071840 | P | cellular component organization or biogenesis |
GO:0090304 | P | nucleic acid metabolic process |
GO:0097159 | F | organic cyclic compound binding |
GO:0098687 | C | chromosomal region |
GO:1901360 | P | organic cyclic compound metabolic process |
GO:1901363 | F | heterocyclic compound binding |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |