Detail information of g300732


Location
GeneChrStartEndStrand
g300732Scaffold_64342:HRSCAF_447428107787135580-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020250210.12.9e-199zinc finger CCCH domain-containing protein 19-like
SwissprotQ9SIV5.32.8e-151Protein Needed for RDR2-independent DNA methylation
trEMBLA0A1R3L6M31.9e-189Plus3 domain-containing protein (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G16485.146.270.0 665NERDnucleic acid binding;zinc ion binding;DNA binding

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Ortholog group
SpeciesGenes
Allium cepag300732.t1
Allium fistulosumAfisC6G01270
Allium sativumAsa7G03851.1; Asa8G05150.1
Arabidopsis thalianaAT3G51120.1
Oryza sativaLOC_Os09g36090.1; LOC_Os10g36810.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02201.15SWIBDomain31338658.63.9e-16
PF03126.15Plus-3Domain45455777.78.1e-22
PF02213.13GYFDomain75780142.53.6e-11
PF00642.21zf-CCCHFamily1154117421.60.00013

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
K01062PLA2G7, PAFAH; platelet-activating factor acetylhydrolaseEC:3.1.1.47 Ether lipid metabolismko00565

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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