result

Gene information

Detail information of g301431

Location

Gene	Chr	Start	End	Strand
g301431	Scaffold_64404:HRSCAF_447490	435381	438001	-

Sequences

CDS

>g301431.t1
ATGTCCTATGCCCCCGCTGTTACTAATCCAGTCCTTACATGCAAATACTTGACCCGCGTTATTCTATTCTCTTCAAATCAACAAAATGCAAACAAAGCCAAAAAAAAAAAAAATCCCCAACAAATATATAAAAACAAACAAAAACCCAACAACAGCAATGCAAAATATAAGAAATTTCATCCACTAACTAACCCTTTTCTTTTCTCATTCATTTTTCAACAATGCTCATATTCTTCGTTTAGACACCTACTCCTTTCCTTTCCAATGTTTTCTTCTCCACATCTGAATCTCCTCGTCCTTCTGTTCTCTTCCATATTCATAACATCGATCACCTCTTCTCCTCTTCAAACCATAGCCATTTCCCACATTAAAAACATAACTCTGGTCTGCGCCCTCCTCCCGTCTGCAACCGTTCTAGATTACTACGACCTAAATTGCACTTCCTTCCCCAACGGCATCACTCATCATTACTCCGCCGGCAACAATCCGTACTCCGCGATAGCAGCAGGCGATGGGTTTTTATGCGCCCTCACTTCCCCGTTCTCCTCTAATCTCTCCACCATGAGATGGTGGGATTTCGACCACAACCCGCATAAGGACGCCTTACCCGACCCGAAACGAGTCTACCTCGGTCCTTCTCTTGCGTCCATGTCAGCTGGCGACAATCACGTCTGCGGCATAATTGACCGTAAACTTAACTGCTGGCGGTGGGCTCAATTGGGCATCCCGAAACGTTTGCTTTTTAAAAAAGTGGCGGTTGGTGCAAAATTCGTTTGTGGCTTGTCGGATCCAGATTCCGAGATCAAGTGTTTTGGCGATGATTTGGAAGTCGTTAAAAACGCGCCAACTGGAAAATTCAAAGACATCGATGCAGGTACGACTCACGCTTGTGCTATTTCGGTAGATGGTAAATTTCTTTGTTGGGGCCATGGAGCCCCCGTGTTGCCAGAGGGGGATAAAATTCAAGTTGTTTCGGTTGCTTTAGGAAACAATAGAACTTGTGTCCTTGATAATGTAGCTATTGTACATTGTTGGGGTGAAAATATCAAACTCCCTAGCGATCTTGTTACTTCTCGATTTGTGAACATTCAAGCACGGGGAGATGATTTTTGTGGTGTTTTAATGACGAATTATTCCTTGATTTGTTGGGGAAGTAAGAACTTCCATAATTTAAATCATGTTGTTTTTGAACGAGTGTTGCCTGGAGTATGTGCTTCTACATGTCCATGTCTGCCTCTTTCAGGTTCTGCCATTTATTGCAGCCACGGCCAAACTGTCTGTAGTCCATGCCCGAATTCAATCAAAACTCACAATTCAACGACCATCAACGAATTACCTAATACCAGTGATAATCACAGACGGAAGTTGATCTTCATAATCCTCGGTTCAGTTGGTTTTTTCATAGGTTTAATTTCAGTTGCAAGCTTCATATTCTTCAAAATCAAGCAAAAACACCGAAGAATTCACGACTTGGTCAGGCTAGGCAATCGAAATAGCTTCAGATCTCTGTTTGAATCGAGCTTAGACGCACAAATAAGACAGCTATTCACCAAAAGCCACAGCTCAACAATCGAAGAGTTCTCCATAAGTTACCTATCCTCGATCACCAACAACTTTTCTGACGATCACAAGATTGGTTCAGGCAGTTTTGGTTCAGTCTACCGTGCAAAACTAAAAGACGGAAGAATCGTAGCCATTAAACGTGCTGAAATATCAACCGCAGCATCGACATCACGTGCACGTACACCAAATGGAGGCAAAAGCCGACGCCAAGACAAAGAATCGGCCTTCTGCTCCGAGCTCTCCCTTCTGTCCCGAGTCAACCACAAAAATCTAGTGAGACTCTTCGGCTACTGCAAAGAAGGATTCGAACGAATCCTTGTATATGAGTTCATGACCAAAGGAACTCTTCACGACTTCCTTCACAAATCCAATGGCTCAATGCTCGACACTTGGGCGGCTAGGATCAAAGTCGCCTTGGATGCCGCCAGAGGAATCGAGTACCTACACACCTATGCCGTGCCACCCATTATTCACCGTGATATAAAGTCGTCGAATATTCTGTTGGACGATTCGAATGTGGCTAAAGTTTCGGATTTCGGGCTTTCTATACTTACTCCGGACCCGAACCGTGTTAACGAAACAAACGGTTACGATTATCCGCTTTCGACGGCGGGTACGGTCGGGTACATGGACCCGGAGTATTATAGACTCAGGCAGTTGACTGCGAAAAGTGATGTGTATAGCTTTGGGGTGGTTCTATTGGAGATACTTTCAGGGTGTAAGGTGATACAGAAGTATGAAGAGAGTGGGACGCCGAAAAATGTGGTGGAGTATGCTGTACCGCATATACAGGCCGATAACATACAGCATGTGCTTGATGGAAGAATTGCATTGCCTACGCCTAGGGAAATGGAGGCAGTAGCATATGTGAGTTATTTGGCAACAGATTGTGTGAACCCAGAAGGGAGAGATAGGCCGACTATGACGGAGGTTGTTAATGGGTTGGAGCGGGCTTTTGGGGCGGTTTCGAATCCGTTATCGCCTTCGAGATCGTCTACCACGGGACGGTCGAATTGA

Protein

Gene

>g301431.t1
ATGTCCTATGCCCCCGCTGTTACTAATCCAGGTTTTACACATTCAATATTCAAAGCTGACTCAGTCACTAAGTCCTTACATGCAAATACTTGACCCGCGTTATTCTATTCTCTTCAAATCAACAAAATGCAAACAAAGCCAAAAAAAAAAAAAATCCCCAACAAATATATAAAAACAAACAAAAACCCAACAACAGCAATGCAAAATATAAGAAATTTCATCCACTAACTAACCCTTTTCTTTTCTCATTCATTTTTCAACAATGCTCATATTCTTCGTTTAGACACCTACTCCTTTCCTTTCCAATGTTTTCTTCTCCACATCTGAATCTCCTCGTCCTTCTGTTCTCTTCCATATTCATAACATCGATCACCTCTTCTCCTCTTCAAACCATAGCCATTTCCCACATTAAAAACATAACTCTGGTCTGCGCCCTCCTCCCGTCTGCAACCGTTCTAGATTACTACGACCTAAATTGCACTTCCTTCCCCAACGGCATCACTCATCATTACTCCGCCGGCAACAATCCGTACTCCGCGATAGCAGCAGGCGATGGGTTTTTATGCGCCCTCACTTCCCCGTTCTCCTCTAATCTCTCCACCATGAGATGGTGGGATTTCGACCACAACCCGCATAAGGACGCCTTACCCGACCCGAAACGAGTCTACCTCGGTCCTTCTCTTGCGTCCATGTCAGCTGGCGACAATCACGTCTGCGGCATAATTGACCGTAAACTTAACTGCTGGCGGTGGGCTCAATTGGGCATCCCGAAACGTTTGCTTTTTAAAAAAGTGGCGGTTGGTGCAAAATTCGTTTGTGGCTTGTCGGATCCAGATTCCGAGATCAAGTGTTTTGGCGATGATTTGGAAGTCGTTAAAAACGCGCCAACTGGAAAATTCAAAGACATCGATGCAGGTACGACTCACGCTTGTGCTATTTCGGTAGATGGTAAATTTCTTTGTTGGGGCCATGGAGCCCCCGTGTTGCCAGAGGGGGATAAAATTCAAGTTGTTTCGGTTGCTTTAGGAAACAATAGAACTTGTGTCCTTGATAATGTAGCTATTGTACATTGTTGGGGTGAAAATATCAAACTCCCTAGCGATCTTGTTACTTCTCGATTTGTGAACATTCAAGCACGGGGAGATGATTTTTGTGGTGTTTTAATGACGAATTATTCCTTGATTTGTTGGGGAAGTAAGAACTTCCATAATTTAAATCATGTTGTTTTTGAACGAGTGTTGCCTGGAGTATGTGCTTCTACATGTCCATGTCTGCCTCTTTCAGGTTCTGCCATTTATTGCAGCCACGGCCAAACTGTCTGTAGTCCATGCCCGAATTCAATCAAAACTCACAATTCAACGACCATCAACGAATTACCTAATACCAGTGATAATCACAGACGGAAGTTGATCTTCATAATCCTCGGTTCAGTTGGTTTTTTCATAGGTTTAATTTCAGTTGCAAGCTTCATATTCTTCAAAATCAAGCAAAAACACCGAAGAATTCACGACTTGGTCAGGCTAGGCAATCGAAATAGCTTCAGATCTCTGTTTGAATCGAGCTTAGACGCACAAATAAGACAGCTATTCACCAAAAGCCACAGCTCAACAATCGAAGAGTTCTCCATAAGTTACCTATCCTCGATCACCAACAACTTTTCTGACGATCACAAGATTGGTTCAGGCAGTTTTGGTTCAGTCTACCGTGCAAAACTAAAAGACGGAAGAATCGTAGCCATTAAACGTGCTGAAATATCAACCGCAGCATCGACATCACGTGCACGTACACCAAATGGAGGCAAAAGCCGACGCCAAGACAAAGAATCGGCCTTCTGCTCCGAGCTCTCCCTTCTGTCCCGAGTCAACCACAAAAATCTAGTGAGACTCTTCGGCTACTGCAAAGAAGGATTCGAACGAATCCTTGTATATGAGTTCATGACCAAAGGAACTCTTCACGACTTCCTTCACAAATCCAATGGCTCAATGCTCGACACTTGGGCGGCTAGGATCAAAGTCGCCTTGGATGCCGCCAGAGGAATCGAGTACCTACACACCTATGCCGTGCCACCCATTATTCACCGTGATATAAAGTCGTCGAATATTCTGTTGGACGATTCGAATGTGGCTAAAGTTTCGGATTTCGGGCTTTCTATACTTACTCCGGACCCGAACCGTGTTAACGAAACAAACGGTTACGATTATCCGCTTTCGACGGCGGGTACGGTCGGGTACATGGACCCGGAGTATTATAGACTCAGGCAGTTGACTGCGAAAAGTGATGTGTATAGCTTTGGGGTGGTTCTATTGGAGATACTTTCAGGGTGTAAGGTGATACAGAAGTATGAAGAGAGTGGGACGCCGAAAAATGTGGTGGAGTATGCTGTACCGCATATACAGGCCGATAACATACAGCATGTGCTTGATGGAAGAATTGCATTGCCTACGCCTAGGGAAATGGAGGCAGTAGCATATGTGAGTTATTTGGCAACAGATTGTGTGAACCCAGAAGGGAGAGATAGGCCGACTATGACGGAGGTTGTTAATGGGTTGGAGCGGGCTTTTGGGGCGGTTTCGAATCCGTTATCGCCTTCGAGATCGTCTACCACGGGACGGTCGAATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246790.1	4.0e-214	LOW QUALITY PROTEIN: serine/threonine-protein kinase-like protein CCR4
Swissprot	Q9FIJ6.1	9.4e-120	Protein CRINKLY 4 RELATED 4
trEMBL	A0A6I9QQX4	3.4e-199	LOW QUALITY PROTEIN: serine/threonine-protein kinase-like protein CCR4

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G47850.1	42.16	2e-148	523	CCR4	CRINKLY4 related 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g301431	AT5G47850.1	759	384	21	115	859	32	749	42.16	2e-148	523
g301431	AT3G55950.1	784	385	24	129	840	46	794	37.24	6e-114	409
g301431	AT3G59420.1	842	425	32	99	848	17	798	31.47	2e-93	340

Ortholog group

Species	Genes
Allium cepa	g301431.t1
Allium fistulosum	AfisC4G05738
Allium sativum	Asa5G04736.1; Asa5G04737.1
Arabidopsis thaliana	AT5G47850.1
Oryza sativa	LOC_Os04g35890.1; LOC_Os08g01830.1; LOC_Os11g11490.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	540	834	157.1	4.7e-46

Gene Ontology

Accession	Ontology	Name
GO:0005515	F	protein binding
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0005488	F	binding
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0046983	F	protein dimerization activity
GO:0008150	P	biological_process
GO:0042802	F	identical protein binding
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0042803	F	protein homodimerization activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network