result

Gene information

Detail information of g306192

Location

Gene	Chr	Start	End	Strand
g306192	Scaffold_65046:HRSCAF_448132	118124	120219	+

Sequences

CDS

>g306192.t1
ATGAAAGTTGACACATGTTTCAAGTTGCCTTTTTTCCGCCACCGAGATTCTTCATCTTCTCTATCAACTTCAATTCAAGATGAGGGGAAAAGTATAGTTAGGTACTCATATAAAACTTTGAAGATTGCTACTCAAGGGTTTCATTTAAATTCTAAGGTTGGCGAAGGTGGATTTGGTTCTGTTTATAAGGGAAAGCTTAAAAATGGAGTAACCGTAGCCATTAAGGTTCTTTCAGCTAAATCTTTACAAGGAGAACGCGAGTTTGTAGCAGAGATTGAATCCATGACCAGCGCTAAACATCAAAATCTGTTAAGGCTGTGTGGTTATTGTATAGAAGGTAGCAACAGGATACTAGTCTACGATTATATGGAGAAAAATAGTCTTGCTCAAACTCTTCTAGGTGGAAGGCATTGCGACATCGATTTCACATGGGAAATAAGAAGGAAGATTGCTACAGGAATAGCTCATGGCCTTGCTTATTTGCACGAGGGAATCAAACCACAAATAATTCATAGAGATATTAAACCAAGCAACATACTTCTTGATTCCGACCTTGTTCCTAAAATCTCTGATTTTGGTCTTGCAAAACTCTTCCCTGATAATCTCACACATGTTAGTACGCGTGTTGCTGGCACATTAGGCTACCTTGCTCCGGAATATGCAAGATGTGGAAAGCTAACACGGAAATCAGACGTTTATAGTTTTGGAGTGTTACTTTTGGAGATTGTAAGTGGAAGAACCGCGACAAACCATGCTTTCGGACTAGATAAATATAATACAGTCGAGAAGGCTTGGCAACTATACAACGACAACAATCTTCTTCAACTCATTGATCATTCAATGAAAAACGAGTCAATGGGGGAAGAAGAAGAAGTGGAGCATTTCTTAAAAGTCGCGCTTCTCTGTGTGCAGGAGATGCCAAGCCACAGACCATGTATGTCCAGAGTAGTAAAAATGTTATCCACGAAAGAAAGCACAAAGGATCTTCGAATTTCACCACCTGGAGTGATCAGGGATCTCAAAGTACTGAAGTCCGATGAAATTAGAACAATCAAGTGTACCGCTTCTAGTTCTACGTCTGTGAATCAGTCTTCATCCAGTTTTTCTAACTAA

Protein

Gene

>g306192.t1
ATGAAAGTTGACACATGTTTCAAGTTGCCTTTTTTCCGCCACCGAGATTCTTCATCTTCTCTATCAACTTCAATTCAAGATGAGGGTGAGTTCCTTACTTTATTTCTTGCAGCTTATGCAAATTACGACTATTCCGCAGTCTGATTTTTTTAACATCTTCTTTTCTTCGCCCACTCAAAGGGAAAAGTATAGTTAGGTACTCATATAAAACTTTGAAGATTGCTACTCAAGGGTTTCATTTAAATTCTAAGGTTGGCGAAGGTGGATTTGGTTCTGTTTATAAGGTATGTACATGTTTCTAAGGTGGTTGTAATTGAGGAGATTTTAAGTTCTAACAAGTTCTTTTACCTTACTACTATCAAAAGAAACGAATATACTGAAGACGTATACCCTTTCCGAAACTAAACTTGCCAGTCACTGTCACTGGACCTCCAAATTTGATTTAGAGGAGCTCTTTTTGTTCAACGGGATATTGTGATGAGAGTTACATGCAATTTATCTTTCTTTTTTCTAGAATAATGCAGATTTTGTAGTCTTTTTTATTATAAACATCTTCTTAGTCAAATTTGGTGTCTTTATAACTCCACATGACTCAATATGCAAGAACTCGGAACAGCATTAATCTGATGCAACTAACATCTATGCCATGTGAATCTTCAGGGAAAGCTTAAAAATGGAGTAACCGTAGCCATTAAGGTTCTTTCAGCTAAATCTTTACAAGGAGAACGCGAGTTTGTAGCAGAGATTGAATCCATGACCAGCGCTAAACATCAAAATCTGTTAAGGCTGTGTGGTTATTGTATAGAAGGTAGCAACAGGATACTAGTCTACGATTATATGGAGAAAAATAGTCTTGCTCAAACTCTTCTAGGTAAATTTCTAACCTTAGTATTTAGAATTCTGTATCTAATAACAAAAATAGGATACTCATTCTGACTTTTGTTAATGTAAGGTGGAAGGCATTGCGACATCGATTTCACATGGGAAATAAGAAGGAAGATTGCTACAGGAATAGCTCATGGCCTTGCTTATTTGCACGAGGGAATCAAACCACAAATAATTCATAGAGATATTAAACCAAGCAACATACTTCTTGATTCCGACCTTGTTCCTAAAATCTCTGATTTTGGTCTTGCAAAACTCTTCCCTGATAATCTCACACATGTTAGTACGCGTGTTGCTGGCACATTGTAAGTTTTAACATATATTGTATAGTGTGCATATTAGTTATTTTATGTTCACCTATAAATTTAACTTTCTATTTTGATTAATGAAGAGGCTACCTTGCTCCGGAATATGCAAGATGTGGAAAGCTAACACGGAAATCAGACGTTTATAGTTTTGGAGTGTTACTTTTGGAGATTGTAAGTGGAAGAACCGCGACAAACCATGCTTTCGGACTAGATAAATATAATACAGTCGAGAAGGTAAAATTCAAGTTGATTTAGTCCGTCTTGCTTTCTATGTCCTTGAAAAATGCATAGTGATGATACAATATAGTTCTGGCAACTTAATGACATTGCATGATATAAAGGGGTTGACAGAACTAAGTTTCGTGGCTATTTAAGTTTAGAACTCTAAACACTGTGTTCTTTTGTGTTTTATGAAGTAAGAAGGTCTGGTTTACAACATGTGCTTTTATAGCAAAATATAATATGTGCATAAGCTGTGTCCAATGGAAATAATGATATGTATTGCACAGCGAGATGATATGCACCTTATCTTGACTGATACATTTTTTTACCAAACTGATATACAATTGTGTGTTCCAGGCTTGGCAACTATACAACGACAACAATCTTCTTCAACTCATTGATCATTCAATGAAAAACGAGTCAATGGGGGAAGAAGAAGAAGTGGAGCATTTCTTAAAAGTCGCGCTTCTCTGTGTGCAGGAGATGCCAAGCCACAGACCATGTATGTCCAGAGTAGTAAAAATGTTATCCACGAAAGAAAGCACAAAGGATCTTCGAATTTCACCACCTGGAGTGATCAGGGATCTCAAAGTACTGAAGTCCGATGAAATTAGAACAATCAAGTGTACCGCTTCTAGTTCTACGTCTGTGAATCAGTCTTCATCCAGTTTTTCTAACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020272903.1	4.0e-131	putative serine/threonine-protein kinase isoform X2
Swissprot	Q93YN1.1	5.4e-88	Cold-responsive protein kinase 1
trEMBL	A0A5P1EDI5	2.9e-131	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	53.21	6e-92	334		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g306192	AT1G16670.1	312	142	2	35	344	29	338	53.21	6e-92	334
g306192	AT3G09010.1	307	145	2	35	340	34	337	51.47	1e-88	323
g306192	AT1G56120.1	336	146	5	35	370	698	1009	49.40	5e-82	301

Ortholog group

Species	Genes
Allium cepa	g306192.t1
Allium fistulosum	AfisC2G05370
Allium sativum	Asa6G02866.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	47	318	167.1	4.2e-49

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network