result

Gene information

Detail information of g307226

Location

Gene	Chr	Start	End	Strand
g307226	CHR6	271389029	271397086	+

Sequences

CDS

Protein

Gene

>g307226.t1
ATGGCTGCAACAGCATCACTTTCTTCCTCGTTCCTGACTTCAGACCAGCAGCCCATATACCGAAAATCAAAACTTCACTCCAAACCTAGAAAACCCAATTTGTCATTAACTCCAAAATCATCGTTATCAGAATTGTTCTTAGGTGTCGGAGTTGGTTTGCCATGTACGGTGATGGAGTGCGGTGACATAATTTACAGGAGTACACTGCCTAGATCAAATGCTTTGACAATTACCGCCCCTGGTGTAGCTTTAGCCTTGACTGCTGTTTCTTACTTGTGGGCTACTCCTGGAGTTGCACCTGGCTTTTTCGATATGTTTGTTCTTGCTTTTATAGAACGGGTTTTTAGGCAGAAGTATAGGAAGGATGATTTTGAAATTGGGAAGAAGTTGGGTGAGGGTGCTTTTGGTGTTGTTTATAAGGTTTCCTCCCAAAAGCCCCTTAAGGTATGAACTATGTTTTGGAAGTTTGCTGGAAAATGTGTAATTGAGTATTGGGTTAAATTTCATTATAGTCGTAAAATGGGGCAATTTCCTTTTTCTTTTTTGGTTTTTGTTAAATGCGTCATCCGTTTTGCCAAAACTCCAACATTGTGGCATATTTTAACCATTGATCACTTGGGCATCGATAACATTTTGAAATATATCACCTGGTTACTGAAACTTTGATGTCGCTGTTGTTGAAAGCAATGTAAACTTAAGAGAAGAAATTTGCTCTAATAAAAACGAACTTTCTTATTTCCATGAATTCTTACTTTGTTGCTTGATTGCAAATGAAAGGACTAGATTCTCTTTATACAGCGTGCAATAGGGACTTAATACATGAATCGAAATAAATTCTCGTGAAACCACTTTTATATTTCTTTATTTTCTAGAGGTTACTCATATTCATGAATGTATTACTAAATATAAATATGACATTATAGAAATTGTTTAGTATTATCCATTTAAACGAGAGATTGTGACATCCTCTTCTACATGGTGCAACATACTCCATTTTGGTAGTAGAAAGAGCAACAATGGTTTGTTTCTTTGAACACCTTGAAACTGTGCTGTGCCAAAACCAATTTTGAATACACAGCAAGATGCACTCTTATGATCATTAATGTCTCCCTAATCGTTGTATCCAACCAAGGAGGGTTGTTCAACTTTCTTATAGTTTCTCCCAATGCCTCTTCTTCTGTGAAGTTATTAATCGGCTCAGTGAGCTAAGAGCAAATATGAGGCGATGCCTTGTTTCTGCTAGATGCTTAAGACCTCCAACTAAGCTTTGGTATGTAGTAGCATAAATATCACTGCTCTCGTCATTTCTGCTTAACTTCAAGTTTGATTCCATAGGGGGCACTGCATGGGCTTTATCCATTTGGAACTTCTTCAACAAATTTCATGCATATTTATATTTGAGAGATTAATAATGAAGTAGTTCCAGGTCAGTCATCTCAAATTCATTCTTCATGCACTTTATAACCTCTTCTCACATTTTCTCATAATTGCTTGTGAAAACAAATCGACAACATCGAGACAAACAATGAAAAAAATTGCCGACTCTTTCTTCCTTTATGTATAGTGCATGCTAGTATATACACCTCTTGAACCCATGCTCTACGCGGAAACCATTAGTCCGACTGTACCGATCCATTGGGCCTGCTTCAGTCCATATGTTTTCCTAAGGCGACAAACCTTGTCCTTTTCTTCTTTCTTCTGGTAACCCGATGGCTGCTCGATGCAATCTTCTTCTTCAAGAATCTCATTAACGAAGGCTAATTCGACATCCAATTGGTTCACCTTTCATGCCTTTTGAGCAACTAAAGCTAACATCAACTGAATGGTCTCCTTGCAAGCTATCAGAGCAAAAATCTCTCATAATTGATTCCATGCTTTTCCTTGTGGCCTTTAATAACAAGTCTTGCTTTATTTTTCTCCACGACACCATTTAGGTTCAATTTTGCGTTGTCTACAAACTTCACTTCAAGAGTTTTTTTGGGAATCTTGGCCCGTTTCCAGGTCATGTTTCTCTCAATCAATAAAATTTGTTGATCGATAGCATCCCTCCATTTTTTTCCCTTTTAGATGCTTTTTCAAAATTGATTGGATCTATATTTGCACACAAGGAAAAAATGCATACCGACATTTTTGGCCATCACATATTTCACCAGAAGGATACCTTATGGATGATTGATCGGGTTGATTTTCATCGTGGTGTCGAAGTGGACTTTTCAATCTTGCTTAGTCTCCTCAGCAGCTTCATCTTGTGGGTCCTTCTTTTTATCAAGGTTAAGATGTGATAACAAAATATGGTAGGATTCCACTTCCATGAGTCTTCTTCATTGTCTACCGATGATTGACTTTTTAGAAATGAAATTATACAAGCAAATATGGTATAAAGTTTTGTTATGTCACACTAGAATGCACATTTCAGATTTATCATCCAACTCGCTTCTCTTTTCATTGTAAATGAGTATAACCGATGCTTTTGAGTACGTTATGAGTGTCTAACATAAGGTTCAAAACTACCCCAAGCCTTTTGAGGAGTCGTATCTTGAACAGTTATAGTTGTTGCCCGATTGAGAGGATAATCCGCACATTTCACATCTGCAGCCCAAAATTTATTTGGCATCTCCTTGGTTTTCAACCCATTTCAAGTCATTTTCATGATTGTTCTATTTTTTCTCTCTAAGAATACATTCTGATGGGGAATGTAGCAAACAATTTGTTGGTGCTGGATTCAATTCTCTTGCTAGAAGCTCGCAAAGAGGCACATTGTCCCCCATGATTGGACCGTAGAATTTTTATCCTCTATCTTAGTTGCTTCTGAACAAGAGTCTTAAAGCTGCTCAAATGCTCCACTTGCCTCGCCAAGCAAAAAAATACACCCACATCATTCTATTGTAATCGTCTATGAAAGTGAGAAAGTAATGATTACCTTCAGCAGAAGTTGTCTGCATTGGTCCACGTTGATTAACATTCAGTAAGTCAGTGGGAGTTGTGGCTCTACACGCTTTCCTTTTGAAAATTGAACCGTGTGATGTTTTCCAGTGTTGCAGATTTCACAAATTTGACGATCCTTCTGATTTATATTTGTCAGTCCTCTCACCATTTGCTTTCGGCTCGATATGACATAGAAGAGTGAAACTCAAATGCCCATATCGAAAATGCCAAAACAACATGGGATCTTTTGCAAGGGTGCTAAGACAAGAATGTTGATAGTAAGATAAATTCAAGAGAAAATCATATTTGGAGTCATCTTTGCTTTTGCAATGAGAGCATCATCGTTTCCATTGATCTTGCATATCTCGCGTTTAACACCACATTATGTTTCTTCTAAAGAAGTTGCCCAACACTTGATAAAATGTGTTTAAGACTATAAGATATTGGCCACTGGCTTGATTCTTTTTTTTTTTTGGGCATGAGGTCATCTTTCATTCCTTTCACTTCAAGGTGTTTGTCATCACCAATTTTGACTTCAATTTGGATACTTTCATCAAAATTATAAAGATACTTTTATTTCCCGTCAGGTAATTGTTGCAACTACCATCAAATTTTAAAAAAAATTATCGAAATTTTCGAATTTTTATAGGCAAAGAAAAGAGTACATTCATCATAATTTGCTTCCTCGTGTAGAATGAAATGCCACCTTTTTACCTACGATATGTTTGAGTATGACTAAAACATTTGCAATTGTAGCGTTCATGTTGTTTGTGGGTGAGCAAATATTAGTAGATTCGGTAGATCTTTGGCTTCGGAACGATAACCCAGATATCATTTTATATGAGAAAATTTTATAATCCTCTTAGGCAATTCAAGTGCATTTACCTACGATATGTTTGAGTATGACTAAAACATTTGCAATTGTAGTGTTCATGTTGTTTGCGGGTGAGTAAATTAGTAGATTCGGTAGATCTTTGGCTTCGGAACGATAACCCAGATATCGTTTTATATGAGAAAATTTTATAATCCTCTTAGGCAATTCAAGTGCAATAACAAAGAGAAATAAAATATTTCATATCATAGGCAACAAATAAAAAATAAAATATACGGCAAAAAGTAATAACATGCAGAGTTTTCATAATGATTTGCCACAAACTTGGTGTATGCATCCACTTCTTCTATTATTGCTAATTTCTTTTCTATAAACTTTGTTTACATCTGATTGTAGAGAGATTACAACAGTAGAGTTAGAAGATGGTGAAACATTCGAGGGGAAAAATGACTTCCACATCCCCAAAAGGAAGTAAAATAAAGTTGGAGAGGTTCCCTTCTTCTCGCACGTTATAGGTTTCCATTATAGAAAAAATATCCTATATCTATCTCACATCTCTTCTTCTTTAATGGTTCAATTGAAATTAATATAGTTTTACGATCTTTGAAATGCGTATAATTTGGTTAACATTCTTCTTTTTCATCAAATGCTCTTATTTTGATTGACCTGACACCTTTCATATCCATCTCACGATCGTTGGCTGATCCTACCTTTACCGTTTTGTCCTTATAATTTATGATTTAAGCGTACACCTGAACCAAACACATTCTTTGTCTTTTGCTTATCAACACAAACACAGATTCATCGTCTCCCATGTCAACGTTTCTTCATTATTGTCTTCTACATGCTCGCTTATCACTTTCTTTAATACTTTCAATAGCTGTTTAGCCCTCTTTAGTTTGTTGCAAAAACGTTGCTCATGTCTCGCTTTTTGGAAATAGTAGTATGTGAAGTAGCCTTCCATGCCTTTCTCACTGAAGTAGCCTTCCATGCCTTTCTCATTGGATGATCATCTTCTTTCTTTAAGGTGATCGTTTTTCCATCATAATTCCTTCATTTGACCCGTTTGTTTCACTTACATGCAAAATTGAGTTCTTCAAAATGCTTGTGACCATCCTCTTCATCATTATGATTTATCATTCTCATTTTCGTATTGATTAAGTTGTTAACCAACAAATCCATTGAAACAACTCCATCCGAGTTTGAGTTGTTCAATGAAACCATGATTATGTTTTTGATTTTCCGGTAATAAACTTATCAACATCAATGTCAAACATATCAAAGTTTGTGTCTCATCATTTAACTTGTAGTTGGAGGCTATCAGTTGATTCATGTTAGCTTGAAATTTTTTGAGATGTTCATCTACAGTTCCGCCTTCCTTCAGCCTTAAAATTATTTTTCACATTGCACAATATTATTCTTACTATGACCTCTCGATCCTTGAACCTTTTATCAAATACTGTTGATTATTAACTCAACATCGATTAGTTCTCATTCATTTGACTAAATTCCAGATATCTAATTATGATGCACCTCTGAATGCAAAGAGTTGCAAATTGATAGATGCATATTGAATATTATGGACTTATGTTTACTTATAATTTTGAAGCAAGGTGATTTGGTTCTTAAGAAGGCAACTGAGTACGGAGCAGTAGAGATCTGGATGAATGAACGTGTGCGTAGAGCTTGTGCTAATAGCTGTGCTGATTTTGTCTATGGTTTCCTCGAGGTGCACACTTATGTACTTATTACCTTGATTTCAAATTTCTCTGATAGATGGCTAGTATTTGACATATTTTTTGTTCCTAGAGTTCTTCAAAAGGCAAAGGAGCAGAAGAGTATTGGCTAATTTGGCGATTTGAGGGCGAAGATACACTTGCTGATCTTATGTCAAGCAAAGATTTCCCTTACAATGTGAGAAAATGTTGGTATAAATTTTCTAATTTCCAGTAAAAGAAATAAAAAAAGATATTCAAATAGTCTCCTCAAAAGTCTATCTAACAAGTAATACATATGGTTTTCTTTTAAACCACCAATTAGTTTGATTGTATTTTCCTTAGGTGGAGAGAAAAATACTTGGAGAAAATCCTGATTTGCCAAAGGGTATTGAAAGAGAGAATAAAATTATACAAACAATCATACGACAACTTTTATTTGCTCTGGATGGGCTTCATTCAACGGGAATTGTTCATAGAGACATTAAACCCCAAAATATTATTTTCTCTGAAGGTAAATAGTTCTTGTGGTAGACCTCATGCATTTGGTTGATGTGGGAAAAATGATTGTTTGACATGACATAAAGAATGACAGTAATACCCTTTGAAACCATGAATCCCATGTCCAGTTCAAATGTTGTGCGTGCGTGCATGCGTGCATATGTGTCTATGAGATTACAGATATCTACACAGTATGCTCTACTGTCATTATATTACTCATTCCTGGGTATAATATAAAACAGGGTCTCGTGCTTTCAAAATTATTGATCTTGGAGCAGCTGCAGATTTGAGGGTGGGCATCAATTACATACCAAAGGAGTTCCTCCTGGATCCAAGGTAATCGGTGTTTAGCAAAATTTAACATGGTCGTAAGAAAATAATTCACGCACTATGATTTGAAACTATCAGCATTGATAGCAACTAGCAAGCACATATTCTTATGTTTTGCCTTATAGTTGTTGATTATTTTTTTCAGATATGCTGCACCTGAGCAATATATAATGAGTACACAAACACCATCTGCACCATCTGCTCCAGTTGCAACTGCACTCTCTCCTGTTCTATGGCAGGTTCTGCTTCAAAATTGCAAAAAACGCAGCTATCTGTTTCTTCTCTTACGCATGCCATCTAAATCGGTGTGTTTATTAGTTTTAATGATACATTGTATTCTTCTTCTTATAATAGATGAATCTGCCAGATAGATTCGACATTTACAGCATGGGACTTATATTCTTGCAAATGGTAAGACTATTGTTCAACCGAAAGCTTTACACTTATACCCAAATTTTTATATGAGCAAATTGTACTGGCCATAACATAACACAAAGATTTATTTGTGTTATGCATGTTATTTACTTGGAGAACTCTCAATACTACAACAAAGACATGTTTTGTTGATGCTATATACCCTTAATGTCAACTGAAATACTATTGTGTAACATGACAATATTATTCTGGAATGAAAATAAAAAATCTTCTTAATATGGATGGTAAGGATATTCTAACGCTAACGAACTAATTATTTAAATCCCTGCATATGCTTAGCGTACCTATTAATATATTTTTAAACTACTAGTAGCCAAATTACATTTCTCCGCATATCACTTTTCCATCTTCCATTTTACTACACATAATTCAGATAATCCTAAAAACTTCAAAATACAACATCCCAAATCATCGCATATATGTTATGAATTTTGAAGAGGATAAAAAATTGAATTTTGAATAATAATGGTTATTTATCTTAATTATTGGATTTAAGTAACAGATGTAGAGATGTTGCAAATTCCATGGGTCACTTTTATTGTTGTATCATGAAAGGACCATGTATGACACTTATGTGTATCATGAAAGAATCTTGTAAACTAACGTATAGAAATTGTAAGGCTTGTGCGTGGTACAATGAAATAATCCCATAGAGACTTCTTAATCTATTGAATAAAAATGATAACAATGAAGAAGAATAGTAATATAATGTTTAAATGATATTATATGACCTCTAATGTTGATAATTTTTTGGGGATGCTCAGCCAATGATTTTGGAGTTTAAACAGAATTGGCCAATGTTATTAGCAAAATTTAATGGTTTATGGTTCAATGTTAGTTTTACTTGTGACAACTCAATACTTGCAGGCATTTCCATCATTAAGAACAGATAGTGGCCTCATTCAATTCAATAGACAATTCAAAAGGTGCGGATATGACATGACTGCATGGAGAAATCTAGTGGAACCACGTGCAGGACCCGATGTTCGAAAGGGTTTTGAAATGTTGGATTTAGACGGTGGGATCGGATGGGAGCTTCTGACATCGATGGTTAGATATAAAGCACGGAAGAGAACGAGTGCTAAAGCTGCACTGGCGCATCCATACTTTAATAGAGAAGGGCTATTAGGACTTTCTGTTATGCAAAATTTAAGGCTTCAGCTGTTCCGTGCTACTCAAAAAGATTATAGCGAAGCTGCCAATTGGGTTGTTGGACGTATGGCGAGGTCTGGAACAGAGAAGGAAGGTGGTTTCACCGAAGCTCAACTTCAGGAGTTTAGGGTAAGTTCCTTTAGCAACTACAACATAAGCCATTTTTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020265049.1	6.0e-242	serine/threonine-protein kinase STN7, chloroplastic
Swissprot	Q9S713.1	2.9e-225	Stt7 homolog
trEMBL	A0A5P1EVN0	8.4e-238	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G68830.1	82.43	0.0	779	STN7	STT7 homolog STN7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g307226	AT1G68830.1	461	77	3	41	499	51	509	82.43	0.0	779
g307226	AT5G01920.1	405	197	9	91	456	96	491	39.51	5e-74	275
g307226	AT2G38620.2	347	183	14	122	443	2	304	27.38	1e-15	81.6

Ortholog group

Species	Genes
Allium cepa	g307226.t1; g418609.t1
Allium fistulosum	AfisC6G04510
Allium sativum	Asa8G02753.1
Arabidopsis thaliana	AT1G68830.1
Oryza sativa	LOC_Os05g47560.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	124	442	80.9	8.3e-23

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007623	P	circadian rhythm
GO:0008150	P	biological_process
GO:0009314	P	response to radiation
GO:0009416	P	response to light stimulus
GO:0009507	C	chloroplast
GO:0009536	C	plastid
GO:0009579	C	thylakoid
GO:0009628	P	response to abiotic stimulus
GO:0009642	P	response to light intensity
GO:0009643	P	photosynthetic acclimation
GO:0009987	P	cellular process
GO:0010109	P	regulation of photosynthesis
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0034357	C	photosynthetic membrane
GO:0036211	P	protein modification process
GO:0042548	P	regulation of photosynthesis, light reaction
GO:0042651	C	thylakoid membrane
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0043467	P	regulation of generation of precursor metabolites and energy
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044436	C	thylakoid part
GO:0044444	C	cytoplasmic part
GO:0044464	C	cell part
GO:0048511	P	rhythmic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network