result

Gene information

Detail information of g314307

Location

Gene	Chr	Start	End	Strand
g314307	Scaffold_66134:HRSCAF_449220	621382	628717	-

Sequences

CDS

Protein

Gene

>g314307.t1
ATGAATGGACACAGAGTTGAGAGCTGGTATTTTTTGATGTCCTTATATATCTCATCGATGGATATCAAAAATTGATCACAATGAATTACATATACCATGTATAAATTGGCAATCAATGATCAGAATATAACCAGATATACCTGCACACGGAATTAAAAAGAGGATAAAAGATTCTACCTTTAGCCCGCGTATCATTTTTGCTTCTTTTATCTTGTCAATTTTATGTGCATCCAATGATTTTAATGTAGGAAATTAGGAGTTGATGGATGAAAGATTTTGAGATGAAGAAATATTTTCTTTTTGGTGGATTTGATAGATGAAAGAAATATGCAAAGGAAATTTTATTATCAACTGAATGCTTTTACAGTGAACGAAAGACAGTTTATATACAAGAGCTTGCAGTTCTATCCTATTGGGCTTTAGCCCACAAGACAAAAAATAAAATAAAGAGGCTTGAACGGTGCAGATCAAACAAATAGAATCTGAAGGCTGAAATGAAGCAACACTTCAATATATCAGATCTGAAGGAAGGGTTTTCTCATTTATACGCCCCCGCAAACCCTACTTCAGTTAGGGTTGAAAGAAAAAACACTAAATCTCGATCGCTTTCATCAATAAATCAAAAGTTGCTTCAATTGGTTCCATGAAATCTGAAAATAGCTTCATCCGACCCATATCAGAGCATGATTCTTCAAAACAACATGATTCTCCAAAGTCCTGTTGAAACTTGATTTGAGTCGATTTTTTTTTTATTATCAGGTTATTTGAAGCTTTTAGTTTGATTTTTCTTGACAGCATGTTAATTGATGTCGGAGATCTCATTTGAAGCTTCTGCATCTGATTTCACTCAACTGCATGTTGTTTGAGATCTTGCAACCTTGAGGTTCATTAAGATTCGAAGTTGCTGAATTAGTCTTGAAACAATTTCAAATTGAGGCTGAGACTGCTTTGACATCGGGATACTGATGAAAATTTTGTGAGTTGCTAACCTTCAGTTTATCCCTGAGCCGCACAAAGTTGGCTTTAGACAGTGCCTTAGTTAAGACGTCTGCAACTTGGTAAGATGAAGGTATATGATTTATATTTAATTTTCCTTGTGCAACTTGTTCACGAACAAAATACAAGTCAAGTTCCATGTGCTTCGTTCTAGAATGTAAAACTGGATTTGCAGTAAGTTGAACAGTACTTAAGTTGTCACACCATATTGTTGTTTTGCTGTCTAACTTGATCTGTAATTCATCAAGTAGAGACTGTATCCACATCACTTCAGCTGTAGCATTAGCTACACTTCTATACTCTGCTTCTGTACTTGATCTAGAAACAGTAGGTTGTTTTTTTGAACACCAAGATATAGGATTATTGCCTAGAAAAATACAATAACCAGTTGTTGATCTTCTGTCATCTGGATCACTAGCCCAATCAGCATCTGCATACCCTGTAATATTGAAGTACTTGCTTGACTGAAGTGTTAATCCATAATCTGCAGTCCCTTTGAGATATCTTAAGATTCTTTTCACCATTTTCCAGTGTTCATCTGTTGGTTTTTGCATAAATTGGCTGACCTTATTAACACTGTAAGCAATGTCTGGTCTTGTTATTGTTGCATATTGTAGAGCACCAACAATGCTTCTATACTGCTTTTCATTGAGTATTGCATCACCTTTGAATTTTGACATATGTAAATTACTGATCATAGGAGTTGAAATAGCATTAGCTTCACTCATCTTGGCTTTATTCAGAATTTCTTGAATGTATTTCTTTTGACTCAAGTGAATTGATGAATCTGACAACCTTTTAACTTCAATGCCAAGGAAATAGTTTAAATCACCAAGTTCTTTAACACTGAATTTCTGATTAAGCTGCTTTATGAGACTATTGATTTCCTCAGCATTATTTCCTGTAATAATAAAATCATCAACATATATATAAGTACATAAACTATTATATTTTTATTGAATTTTGTAAATAAAGAGTTGTCAGATTTTGTGGGACTGTAGCCAAGCTCAATAAGAGTTGTCTTGAGCTTCTCAAACCACACTCTAGGAGCTTGTTTCAAACCATAAATAGCCTTGTTCAATTTGCACACAAGATTCTCTTTTCCTTTATGTACAAATCCATGTGGCTGCTCCATGTATACTTCTTCCTGCAAAACACCATTTAGAAAGGCATTATTCACATCTATTTGTTTGATGTTCCAATTTCTATACAAGGCAATTGTAATGACTGTTCTTATTGTAGTGGGTTTTACAACAGGTGAAAAAGTTTCATTAAAATCAAAACCACTCTGTTGTGAAAAACCCTTAGCTACTAACCTTGCCTTGTATTTAGAAATTGTACCATCAATATTTTTCTTTAATTTAAAGATCCATTTGCACCCAATAATATTTTTATTTTTGGGTAATGGAACCAGACTCCATGTCTTGTTCCTCATAAGAGCATTGTATTCATCTGACATGGCTGATTTCCAGTTTTCATTTTCCAAGGCTTGATAATAAGCACTTGGTTCTTCAGTGTCCAAACTTGTATTGTATATTTTGGGTTTGAAAATACCACTCTTAGACCTTGTAATCATATGATGACCTGTTCTTGTAGTCTGTTGTTGCTGATTACTACCACCTTGTTCCAGCTGTTCATTGTGTAACAGTGTATCCTCAGATGTTTGTTGAGAAGTAGACTGCATACTAAATCTTTGTTGAGAATTTTGAACAGGTGAAACTGGTTCATCAGTACTCTCATGACCTGGTCCACAACTGGACACTGTGTGTTGTGAGTCAGACCTTTGCAAATCTGAGATGATATTATTTTCACATGTCTCTCTGGAAGCTTGCATAACTTCCTCAGGAAAAGTGGGTATTGGAGGTAGAGATTCTTTTGGGTTATAAATTTTCTTAGATGCTTTGATTTCAGAAGTTTTAAAAGGAAAAATTCTTTCATTGAATACAACATGTCTAGAAATAAAAATTCTGCCATTACAGTCTAAGCATTTATACCCTTTTTTATTACTGGCATAACCTAAAAAGGTACAAGGAGCAGACCTGAAATTTAACTTGTGTGAATTATATGGTCTAAGATATGGATAACACAAACATCCAAAAATTTTCAAGCTTTGATAATCTGGTTTAATATTGAACATTATTTCCAAAGGACTTTTGAAATTTAAGACCTTAGTTGGTAGTCTATTTAGCAAGAAAACAGTTGTAGCAAAAGCATCAGGCCAAAATTTTAAAGGCATAGCTGATTGAGCTAATAATGTGAGACCTGTCTCAACAATTTGCCTATGTTTTCTTTCAATAATTCCATTTTGCTCAGAAGTATAGGGACAAGTTGTTCTATGAACAATCCCTTTCTTCTGAAAATAATGCTTCAGAGGCATATACTCTGTTCCACCATCAGATTGAAACACTTTTACTTGGCAGTTAGTTTGATTTTCTGCCTGAGCAATGAATTGTAACACTGCATTATATGTTTCATCCTTAGATTTTAAAAAATATATCCAAACATATCTAGAGAAAGCATCAATAAAAGATATATAATATTTAAATCCATAATCACTGTGAATTGGTGCAGGCCCCCATAAATCAGTTGCAACTAGTTCAAGTGGCTTACTGTAAATAGTTTCAGAATTTGAAAAAGGCAATTTGTGTGCCTTACCCATTTGACAGAAAGTACATATGTATGGTGAAGAAAAATCATTAAAAGAAATATTATTATTACTCAGAACATGTTTTACAATTTTAGCATTTGGATGACCCAATTTATAATGCCATATGTCAAATGTCTTGCAATTTTCTTCCTCTTTCAATTCAGAATTATTACACCAATTTCTTTTAATTTCTGATTTTCTTGAATTAGCCACAGTGAACTTGTACAGCCCTTTATATTCATTACCCTGCAAGAGAATGTCTTTAGTTAGGATATCCTTAACCAAACAGTGATATGGGTAGAACTCAAAATAGACATTGTTGTCTTTTGCAAATTGTGACACACTTAATAAATTTTTTCTAATCAATGGTACTCTAAGCAAGTTATTCAAGTATAACTGCCTTTTTCCCATAATATAAGAACTGCCTGTGTGTGTGATTGCAATAGACTTACCATTTCCTACATGAATAGAATTCATACCTTTATACTCCCTGTTACCAAGATTCAAATTGCTCAAGTTGTTTGTAAGATGATTGGTAGCTCCAGAATCTGGATACCAGTCTTCATCATGAATATGCTCTGGCTTTGCTACTTCTGATTGTTGATAATTTTTATTGTCTGATTGATTACTTGAATCATTATGAACTTGGGCCATATTTGCACTGAGACTTTGATTTCTTTGACTGTTGGAATTTTGTCCTGGTACATAATTCAGATTCAACCTGAAATAACACTTTGCTGCTGTGTGCCCCAATTTTTCGCAAATCTGACATTTTGGTCTATTATTATTGTTCCATCTTCCTCTTCCTCTAGATCTGTTAGAATAACCACCTCTTTGTATGGTCTGATCAGATTTATTACTGCTTTGACCTTTGCCTTTATAATTTGCTGCATAATTGACATTGAAATCATTTTCTTGAGATTTCTTATTATCAATTCTTGCCTCATGAGCAAGTAAAACAGAGTGAACATCATCTACAGATGGTAAAGTTTTCTGAGAAGAAATCACAGCAACAACAGCTTCATATTCATCACTTAATCCATTTAGAATAGTCATAATTTGTTCTGAATCACTGATCTTATGCCCTGCTGCTTCAAGTAGATCACATGTAGTCTTGACTTTGGAGAGATATTCTCTCATATTTTGACCATTTTTCTTGATGCCATGTAACTGCCTTTTGTAAAACATAACTTTTGCCGCTGATTGTGTATTGAAAACTTTATCAATTGTTACCCAGATTTCATTGGCTGTTTTGCAACCAATAACATGTGATAAAAGATTTACATTGATTGAGGACAACAACCAACCAAGAACATATGAGTTTATCTTGTCTATGATATTTGATAAACTCTTCATTGCTGACTATCTTGTTTTCTTTGTCAGTGATACATACTGGAGGAATTTGAATTGTTCCCTGAATATAGCTATCAAGCCCATATCCTTGTATTGCTGTTTCAACTTGAAGCTTCCAAAGAAGATAATTATCTTCATTTAGATGAACAGTAACTAACTGACTTTGGGGACTGACAACAGTCTTGATCAAATTCTCTGCAGAATTAGTAAATTGGGTACTATTAGCAGTTGATGATGCCTCAGTGTTGCTTTCATCAGCCATGATGATCTAAACTGATTTCTAGAGATAAGATGCAGTCAAGCTGAAATAATTCTCAAGAACTCAAAAAATGGAATGCAAAAACAGGTAAGTTGCAACCAAGAAGTTCTCAAATGATGAATTTTCTGATAGAATTTCTTTTGGATGGCACTTTTCTGTTTCTTGTGTTGCTTTTCTTGATTTCTTGATCTGATTTCAAGAGTTGATTTGTATCTTTCACAATTCAGTGATGAAATCTCGATGCAGCCTGTAGATAAACTGGCGAGGCACAAGATTGAACTGAATCAATCCTTTAAGTGATGAATTGAAACAACTTTCTGATAAAGGATAAGATCAAATGATGAGATTATCCTCTGATGATACTTTGATTTCTTAAAAGTTTGCTGTTAAGCAATTTACTCGAGCTCTGATACCATGAAAGATTTTGAGATGAAGAAATATTTTCTTTTTGGTGGATTTGATAGATGAAAGAAATATGCAAAGGAAATTTTATTATCAACTGAATGCTTTTACAGTGAACGAAAGACAGTTTATATACAAGAGCTTGCAGTTCTATCCTATTGGGCTTTAGCCCACAAGACAAAAAATAAAATAAAGAGGCTTGAACGGTGCAGATCAAACAAATAGAATCTGAAGGCTGAAATGAAGCAACACTTCAATATATCAGATCTGAAGGAAGGGTTTTCTCATTTATAATGGAGGAATAGGAGGAGTTTCTCAGGCAACTCAAGTTGGAAAGCCTGGACGGTTTCACCAGCATTGGTACCCTTTGAATTTGCATGTAAGTCCACTTCTAGCTCTTTGCAACAATATATATTTTCCACTATAAATGTATCTACTAACCAAAGTTGAAGTTGATTAAAAAAAGGTATCTTGACTGTATGGTTTAACCTTTTTGATTTATTAACAGCTTTTCAGGATAATTTGATAGATCTAAGAAAAAGCAAGACATACAGGTGGAATTTGAACCATAGGAAAATGTATTTGTCTGATATTTTGATAATGTATTGGGTTACTTTTTTCGCAGTGCAAATCATATCTCCATTTCTATTTGTAGTATATAAAAACAAGATAATATCGATCATACATTAAGTCCTGGCGATTTAATTATCACAGCACCAAAGAACACGGGAAGAAAATACAAACAGTTTAAAGATCCCACAAAGCGCGCAGAATGCATGAACCCCGATGAATAAAACGCAAGCCTGCCACTGTAATACGGACAACACAGAGCTCCAAATGCTAACATGAAATTAGCTGAAGAAAGAGAGGAGTTGACCTGAAGGCGTTTTCTGAGTGAGCAACCTGCCTCTTAAGCTCACGCTCAACAAACGTTGAATTTTTTAATGTTAGTCATGCTGTTTGACCCTCACTGCACTCACACGTGAACTCCTGCATTTTTTAATCTCATTCCTTCCTGTATATAAATCCACTACATAGCTAGCTCTCCTCATAATTACATATCATATCTACTGAAACTCTTATATAACAAAAATCCAGATTAAATTTAAAGATGGGTAGGATCCCATGCTGCGAAAAGGATAACGTAAAAAGAGGACAGTGGACGCCCGAGGAAGACAACAAGCTCGCGTCCTACATTGCCCAGCATGGCACTCGCAACTGGCGCCTCATTCCCAAACACGCAGGTAGTTATTGTAACTATTCTTCTTTCTTGGTTGCAAGTAAAGAGGATTAAAAGTGTATATATACGTATAGGACTGCAAAGATGTGGGAAGAGCTGCAGGCTGAGGTGGACAAACTATCTAAGACCAGACTTGAAGCATGGGGAGTTCACGGAGATGGAGGAGCAGACGATAATAAAGTTCCACGCAGTGCTGGGGAACAGGTGGTCCATCATAGGCAGCGCAGCTGCCAGGGAGGACGGACAACGACGTGAAGAACCACTGGAACACGAAGCTGAAAAAGAGACTGTCCGGGATGGGGATAGACCCCGTGACGCACAAGCCGTTCTCGCACCTGATGGCAGAGATCGCGACCGCATTGCCACCGCCGCAGGTGGCTCATCTGGCCGAGGCGGCACTGGGGTGCTTCAAGGACGAGATGCTTCACTTCTTGACTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_030444034.1	1.1e-46	transcription factor MYB80
Swissprot	Q9XHV0.1	4.3e-48	Protein MALE STERILE 188
trEMBL	A0A8B8NGM8	7.9e-47	transcription factor MYB80-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G56110.1	87.23	3e-48	188	AtMYB103;ATMYB80;MS188;MYB103;MYB80	myb domain protein 103

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g314307	AT5G56110.1	94	12	0	62	155	1	94	87.23	3e-48	188
g314307	AT4G28110.1	126	48	2	62	184	1	123	57.14	2e-35	145
g314307	AT4G05100.1	107	35	2	62	167	1	104	63.55	2e-35	145

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00249.28	Myb_DNA-binding	Domain	75	122	67.7	6.7e-19

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000902	P	cell morphogenesis
GO:0000904	P	cell morphogenesis involved in differentiation
GO:0000981	F	RNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0000988	F	transcription factor activity, protein binding
GO:0000989	F	transcription factor activity, transcription factor binding
GO:0001067	F	regulatory region nucleic acid binding
GO:0001076	F	transcription factor activity, RNA polymerase II transcription factor binding
GO:0001134	F	transcription factor activity, transcription factor recruiting
GO:0001135	F	transcription factor activity, RNA polymerase II transcription factor recruiting
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003682	F	chromatin binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006357	P	regulation of transcription from RNA polymerase II promoter
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009555	P	pollen development
GO:0009791	P	post-embryonic development
GO:0009889	P	regulation of biosynthetic process
GO:0009908	P	flower development
GO:0009987	P	cellular process
GO:0010026	P	trichome differentiation
GO:0010090	P	trichome morphogenesis
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0016043	P	cellular component organization
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0022414	P	reproductive process
GO:0030154	P	cell differentiation
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032989	P	cellular component morphogenesis
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043565	F	sequence-specific DNA binding
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048229	P	gametophyte development
GO:0048367	P	shoot system development
GO:0048437	P	floral organ development
GO:0048438	P	floral whorl development
GO:0048443	P	stamen development
GO:0048466	P	androecium development
GO:0048468	P	cell development
GO:0048608	P	reproductive structure development
GO:0048653	P	anther development
GO:0048658	P	anther wall tapetum development
GO:0048731	P	system development
GO:0048827	P	phyllome development
GO:0048856	P	anatomical structure development
GO:0048869	P	cellular developmental process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061458	P	reproductive system development
GO:0065007	P	biological regulation
GO:0071840	P	cellular component organization or biogenesis
GO:0080090	P	regulation of primary metabolic process
GO:0090558	P	plant epidermis development
GO:0090567	P	reproductive shoot system development
GO:0090626	P	plant epidermis morphogenesis
GO:0097159	F	organic cyclic compound binding
GO:0099402	P	plant organ development
GO:1901363	F	heterocyclic compound binding
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09422	MYBP; transcription factor MYB, plant	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network