result

Gene information

Detail information of g315124

Location

Gene	Chr	Start	End	Strand
g315124	CHR6	228818938	228820729	+

Sequences

CDS

Protein

Gene

>g315124.t1
ATGTCGAATGAAAGAGCAATGGATGCCTACCAGAAATTAGAAAAAGTTGGTGAAGGAACTTATGGGAAAGTCTACAAAGCAATCGACAAAAGTTCTGGAAAAATTGTTGCTCTCAAGAAACAAAAGCTTCCTGAAGACGATGAAGGAGTTCCACCCACTACCCTTCGAGAAGTTTCCATTCTCCGAATGCTCTCTATAGATCCACATGTAGTCAGGTAATTTATCCTCTCCTCTAAAGATTTTGGTTTATTTTAATTTGTGTGATCAGGGAAACATGATGTCTGTTTGACGGACTGTCAAGTAAATTTTGTAAATCCAATAGAAAATTTAGGTTTGTTTTCGGCAAGTTGAAATCTTTTACCGAATCGGCGTTGATAACATAAAGATTTGTTTCTTCAAATATAAAAAGAATAGTTTTGTGTATTTCGCAGGCTACATGTTTGCTAGAATGCCTGTTGCAGCGAAATTTTTTGCTGAATACTTTTCCATTGAAAAATTCATTCCCGATTTAAATGCAGACTGTTGGATTTGAAGCAAGGAAAAAAACAAAGAAGGAAAATCAATTCTCTATCTTGTATTTGAGTATATGGACACTGATGTGAAAAAATACATCAAAAGTTTCCGGGCAAATCACACTCTAATTCCACCGAAGAATATCAAGGTTATTTTTATTTTAGAACTGTGGTTTTCTTATTTTTGTTATGTTGTTTTGAAGAATAATAACCTATGTTTTATATGCAGATTTTGATGTTCCAGCTATGCAAGGGAATGTCCTTCTGCCATGGCCATGGTGTTTTACACAGGCAAGTCACTGAAAAGATATTTATTGGAATTAAAGTGCTAAGTCAGTCGATCTAAATGTATTATTAATTTTGCACAGAGATTTAAAGCCACACAATCTTTTAATGGATTGCAAAACAATGAAGCTGAAAATAGCTGATCTTGGACTCAGCAGAGCATACACTGTTCCTTTAAAGAAATACACTCATGAGGTACTAGTTTTCCTGTTAAACTGTAAATGATTAAAGAACTTCATATCGACTGAATATGATCAATTGTGCTTTAGATTCTTACGTTATGGTACCGAGCACCAGAAGTGCTTCTTGGCGCTACTCACTACTCTACTCCAGTTGACATGTGGTCCGTAGGCTGTATATTTGGTATGTCACATTTCTATATCTTGTTCACGTATGTGTTGATGGTATTTTTATCGAAGCATTATTTAATTTGTTTTATTATTTATGTTTTAGCTGAATTAGTTACAACACAGCCACTGTTTGCTGGAGACTCTGAATTGCAACAACTCCTCCATATTTTCAGGTATATGTTGAAAAAAAAAAAATATTTGGTCCAACTCACTTAACTTATCAATGCAAATTTATGTGCATATAACTATATACTTGCTGTATGATCATGATATAGGCTATTGGGAACACCAATTTTGTGTGCATATAACTATATATTTGTTGTATAATCATGATACAGGCTATTGGGAACACCAAATGAAGTAGTATGGCCTGGAGTAAGCAAATTACCGAATTGGCACGAGTATCCACAATGGAATCCAAAGCCCTTATCAACCGCTGTTCCAAGTTTAGATGCTGTGGGACTGGATTTGCTTTCTGTAAGTCTAAATATAGTATTTTCTTTCATAAGTTAATGTTCACGGGTTCTAAATTTTTGAATCTGTTGAATGCAGAAATTGTTGCAATTTGAGCCTGCAAAAAGAATTTCTGCAAAAAAAGCAATGGAGCATCCCTATTTTGACGGCTTGGACAAAGCAAACTTATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268129.1	1.6e-149	cyclin-dependent kinase B2-1-like
Swissprot	Q0J4I1.1	2.5e-136	CDC2Os-3
trEMBL	A0A5P1EU72	1.1e-149	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G20930.1	76.64	9e-138	486	CDKB2;2	cyclin-dependent kinase B2;2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g315124	AT1G76540.1	304	68	2	6	303	10	313	75.66	8e-138	486
g315124	AT1G20930.1	304	65	2	6	303	12	315	76.64	9e-138	486
g315124	AT3G54180.1	309	99	2	7	303	1	309	64.08	2e-112	402

Ortholog group

Species	Genes
Allium cepa	g315124.t1
Allium fistulosum	AfisC6G01364
Allium sativum	Asa8G05070.1
Arabidopsis thaliana	AT1G20930.1; AT1G76540.1
Oryza sativa	LOC_Os08g40170.1; LOC_Os08g40170.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	10	295	229.0	5.6e-68

Gene Ontology

Accession	Ontology	Name
GO:0051276	P	chromosome organization
GO:0000082	P	G1/S transition of mitotic cell cycle
GO:0000086	P	G2/M transition of mitotic cell cycle
GO:0005515	F	protein binding
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0000278	P	mitotic cell cycle
GO:0000307	C	cyclin-dependent protein kinase holoenzyme complex
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004693	F	cyclin-dependent protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0016570	P	histone modification
GO:0006325	P	chromatin organization
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006996	P	organelle organization
GO:0007049	P	cell cycle
GO:0044772	P	mitotic cell cycle phase transition
GO:0007154	P	cell communication
GO:0007275	P	multicellular organism development
GO:0007346	P	regulation of mitotic cell cycle
GO:0008150	P	biological_process
GO:0008284	P	positive regulation of cell proliferation
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009755	P	hormone-mediated signaling pathway
GO:0009934	P	regulation of meristem structural organization
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010389	P	regulation of G2/M transition of mitotic cell cycle
GO:0010468	P	regulation of gene expression
GO:0010564	P	regulation of cell cycle process
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016569	P	covalent chromatin modification
GO:0016572	P	histone phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0022402	P	cell cycle process
GO:0022603	P	regulation of anatomical structure morphogenesis
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0030332	F	cyclin binding
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032870	P	cellular response to hormone stimulus
GO:0032991	C	macromolecular complex
GO:0044770	P	cell cycle phase transition
GO:0036211	P	protein modification process
GO:0042127	P	regulation of cell proliferation
GO:0042221	P	response to chemical
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0044839	P	cell cycle G2/M phase transition
GO:0044843	P	cell cycle G1/S phase transition
GO:0046777	P	protein autophosphorylation
GO:0048509	P	regulation of meristem development
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0060255	P	regulation of macromolecule metabolic process
GO:0061695	C	transferase complex, transferring phosphorus-containing groups
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0097472	F	cyclin-dependent protein kinase activity
GO:1901564	P	organonitrogen compound metabolic process
GO:1901987	P	regulation of cell cycle phase transition
GO:1901990	P	regulation of mitotic cell cycle phase transition
GO:1902494	C	catalytic complex
GO:1902554	C	serine/threonine protein kinase complex
GO:1902749	P	regulation of cell cycle G2/M phase transition
GO:1902911	C	protein kinase complex
GO:1903047	P	mitotic cell cycle process
GO:1990234	C	transferase complex
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K07760	CDK; cyclin-dependent kinase	EC:2.7.11.22	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network