result

Gene information

Detail information of g319433

Location

Gene	Chr	Start	End	Strand
g319433	Scaffold_66838:HRSCAF_449924	92698	99770	-

Sequences

CDS

Protein

Gene

>g319433.t1
ATGGAGAATAGTACAAGAGAAAAGGAGAATGAAATGGAAGTTAAAGTTTATGTGGCAGTGAAGAAGATATTCGAAGAAGGAAAGGAAAATTTAAGGTGGCTTCTACAACAAACATCTGGTGAAAAGCAGCTCAGAGTATTTATAACTCACGTTCACAGTCCATCAGAAATAATTGCACCCAGTATGTATTTACTCTTTTTATTGCTTATTATTTCTTAAAATTATCATAATATTTCACTGCTTTTGGTGAAGTGCTACTCATTTGTTCATTTCCATTATTTGTTATGGAGATGAGGGGATAAATATATAATTTTCGCACTATCATTCGGCTCGTTTGGATCGATTTATATGTCATTTGTTTGCGCTTTTTGGTAGCTAAAATCAATTCGTTTTGACTTTTAAAAGCCAAAAATCTACTTATTTATGTCGATCCAAACGAGTAGTTACTCTTCTAAAATAAAGATCAGCTATAACTAGTATTAGCAATCTTGAAAGTAAAATTATAACTAGTTTTACTTGCTTCGTTTTTTTTCTTCAAATTATCTGGAGTTCAGAGATTCTTCTTAACTTGAAGACGAATTATACTATGATTGCTACTTATCGAAAGCCTAAATAACTAGGTGCAAATGAAATAGGAAAGAATGACATCTCATATTTTGTTTCATTTGAGATTAAAGTGTACATAATGTATATTAGCTTTGTTTATTTGATGGCTAAAAAATATCACAAGACACTTGATTATCTTCTCATAGCTTCATTTGTTTGTCATCTTCTTTAAGAATATTAGAGGTTGTGTAGTTAGTAACATAAGATCCACTTGTCACATAGGCAAGAGCGTGCTGTGAAATTTCATTTGTGCTCATAAATTCATCAGTTTTTTTAAATGAAGTCTTAGGTCTGTGTAAATTCTTTGCATTCAGTCATTCAAAATACGAAATAACTATTACAACATGTTGTAAGCATTGTCTGTCACAATTGTTTGATTTCTTATCTCTCTTTGTCGATTGAATTTTTAGGAACTTGTGCTAATATATTACAGCTTTCGTTACTCTATTAATAAGCTGTTGCTCTCTAATTAGTGATATGTGTAGATTTTTCCCTCCAAAGCTGTGGCAATTTATGCCTCTTTTAATATAATCATAATAGTAAATTTTATTTCTTATTTTAACGTCTGATTCAGAAAGTAGAGTGAAAACTTGTTTCTGATCTGACTGATCTTGAGACTGAGTTGTTAGCATTAGCAACTGCACAAAATAACTTCTGTCTATTTTAATGAAAATTCTGTATTTTAATGAAATATAGTAGTCAATTTTCACTTAATTGCGAAGGATATATGGTAATTAATTTAGGATGATTAATTATTTGTGGGAGCACAATATGAGTAGCCAAGTCCTTGAGGTAAAAACTTTTTGTGGAGGAAGAGGGATAAAACCAAGCTAGTACATAAAGAAGCCATGAAGACATTTTCCGATAGCCAGATTAGATACTTCGTAGATTAGACTGAATAACCAAAGAGATATATTAGAAGTATAATAGGACAAAATTCACGACTATGATATCCTAACATCATCCTATTTACACTTTCAGCAAAATTTTCAAGCTACGAACATATGACCCTCTCATATAAGTATGTAATTTTTGCCTGCTTTTGATAAGAAACATATCTTCTTTTTCATTATGATTTCAGAGCGAATTGATAAGGTTGAGGAAGTGAAGTTTATGCATAAATGTTTAGATGATTATCTAGCTGAGTGCTCAAGACACAAGGTGCATCTTTTCGTCTTCATCGATACATTCAAGGATCATCATCTCGTATAGGAATTAGCTAAAGATGCTTTAAAGATGTCTTCTTAAACTGAGTATATCTTTTATTTCAGGTACAAGCCAATAAATTAGTGATTGAAGCAAATGATGTTGCAAGTGGCCTTCTCCAGCTTATTGCTATACATGAAATTGACAAGCTTGTCATGGGGGCAGCATCAGACAAATTATATTCAAGGTCGTTGTCTTGCGATCCCTTGCGTTTCTTATATTTTGATGCAAGGAATATATTGACATTGAAATGAATTATGCATAAAGCATATTGAAATGAAAAGAGGGGTTAGATCACATATACTGATAAAAATTAGAGTACAGAGTTAACATACATTATGGTTCATCTGATATTTTGATTAAACATTGTCTTGTGGAGAATCATTCTAAATATAATACTTAACTCGCAGCACTATGAATGCGCCCACATCAAAAACTGCTTTAATTGTGGAGAAACATGCTGATCCTTCTTGCACAATATGGTTTGTTTGCAAAGGAGTTCTTATTCACATGAAGTAAGTATGACTGTTTTTTAAGCTCAATCAAATAATATTCTAATGATTTATGTTGCCATGTAGTTCCACTATATCATATACATATGATATATGACAGGACTTATACAATATACTGCTCCTTATTTTATAGAGAGGCTTCTTCAAATATTACACAATTGCCCACATCAAATTCTCTATCAACCCTGTCTGGACGATTTCATGCCGAAACCTCAAGCGCCAATAGTGATACCAACTTCTGGCACAAGCTTGGAAGTTTTATATTTGGACCACAATTTTCTCCTCAAAGCACATTGATTACGGAAGAGAGTAGAACAGACAATACTTCTAATGGAATACTAGTAAGACCCTAAAGTTGTGATCATTTTTCTTATTTGTACATAACAAGGTCTTAGAAACGTGGGTTTTATAATATAAGGATGCAAGAAGCAAAGGAGTTGCAAAAGGATTGGCACAAATGCATGACAAGAAGATTCATTTGACAAACCAGGCATGAATAGTATTTCCACGTTTACTTTTATTGACATGTATGCAACTTTGAGGAAAATGTATGAAAGACCCGAGCACAAAACTCTTTGAACCCAAAACATTAACTTTACCGTGATAGTCCAATTAACCATGTATCATGTGGTAGAATAACATATGCAATATCATCAAGTCTAGAATAGACCTGTCAAACGGGTTGGGTTGGGTCAAAACGGGTTGGGTCGAGTTTGACTCAACCCATTTATGATCCATTCTTTTTGACCAATTTATTAACCAACCCATTTAATAAGCGAGTTACCCATTTAGCCCATTTAAATATTTAAATTTGATTTGACTAATAAAAAACAAATAAATATAAACTAATTCTAATTTTAATTTTTACGTTTTGAATTTCGATAAAAATCAAAATTTAAAAATTTAAAAATTAATTCTAATTTTCATCAAAATTCAAATATGGGAATGTGGTAGTCGGTTATTTTCTAAGTACAACTGTCAGTCTTCATGGAGAACTACAGTGTGCATCAACGATATAAAGTATCCAAGTGTTCCACATTGTCCGTAACTCAGGTGGGAGTTAATCGGTCGAAGTCTCGCACAATGTAGAAGTTATTGCAGTCTGAACAAAAAAAATAGCGGCTTCTGCATTAGATGGAGTTCAAATATGAGGATGTGGCAACCTGTTATTTTTTAAGTACAACTATCAGTCTCTATGGAGAACTACAACGTGTGTCAACGATATGAAGTATCCGAGTTTTTCATATTGTCCCTAATTTAGGTGGGAGTTAATCGGTCGAAGTATCGTCCGAATCTGAGTTAGTATGAAGAAGTTATTGCAGTCCGAACAAAAAAAAATGCCTTCTGCACTAGACGGACTTCAAATACGAGAATGTAATTTTAAATGGATAAATGGGTTACCCATTTATAATCATTTTAAAAATGGGTCAACTCAACCCATAACGCATAACCCATTTAATAAAATTCAAAAATGTGTTAACCTAACCCATTTATAAATAGGGTAAATGGCTTGAGTTAATGAGTTGGGTCATATTTTGACAGATCTAGTCTGGATAGTGGTTGAAGTGCAAGTTGGCATGCGTATTTCCTTGTAAAATGAGACCTGTCTTTATATTTAACGATAAAAAGGGTTTTCTTGCTGAAAATTTTGTAAATTTCTACAGGAAAACGAGTCTAGTGCAGAATCAGCTGATAAACTTAAAGGCGCTCATGCAGAGATTGAGAACTTAAAGAAGGTAGTTTATGACGAGGCACAGAAGCATAAGAAACTGGAGAAAATTACTAATGATGCAATTAAAAGGGTGGGAATTTACTGTACTATTTGTTCCGTTGCATTGATATACTTTCTTGGAGAATTCATTATATGTGTTATGTGGTTACAGTGTGTCTATGACTGCTAAATGACCTCAGCTTAGCTATTTTCTTTGTAGGCTAAGACATTTGAAAAACAACTGGCTATAGAAATAAAACAGAGAGAAGATGCTGAGAAGGCTGCAGCTGATGTTAATAATAAGCACAGCTTGATTCTGGAAGAGTTGCAAACAGCAAAGAAGGAAAAAATATTTTTTGAAGAGCGTTTGGAGAATGCCAGCATAATCATAAAGACGCTCAAAGATAAACTTACATCAGCTCGATTTTTAATACGTATGTTACAGAGGAGACTAATGAGTCAGAAGCTCCAAAATGATGCCACACTAGAGGAAATCAAAAAATTACGTCAAAAGAAAGATCCAGCTGATACTGGCAAACCTAAAGGACTTGAGTCTTTTTTGGAGTTTTCATATCCCGAGATTGAACAAGCTACAGATGGTTTCAGTAGTTTGCGTAGAATTGGAAAAGGTGGATATGGATATGTTTATAAAGGTGTTCTTCGAGATTATCAGGTGGCTGTAAAAAAGTTGGATCCTCAAAGCATGCAGGGTGAAAGAGAGTTCAAGCAAGAGGTATACTGAATATTTAACCTTTTGTCTTTACAATGATCCCAAGATTGCCAATAATGGTTATATCATTATTTAAGACATTTTTTTCTGCATCCGATAAGATTAATATCATTAAATAACCGTGTTCCGCTGAAGGTGGTAAATTCGTATTTTTGTGGTTCAATCAACACGATTGTTGCATGTTTTAAAAGTGTGAATGCAATATCCTTGGAGAAACATAATTTAAGTTTACCAATGAACTTCAAGAAATTAAACTTAAAAATAACTCATAGAGTTCTAAAAAATAACTCCTCAGTTCTTTTTTAGTCAAGGTAACATGATTGAGGAAATACAGCTTCAATTTTAGACAGAAGCATAACTCTGGTACTTGATGGAGCCAAGAGAAATATCTATCTTGTTAGGTTGTGAGCAACATAAGATAACTAAGAATGGTCAATATCGTTTATTGCAGGATCTCAACTCTGATTAACCTGAGTTGTTAAGAAACAAACTTCACATTTGACCAAGTTAATCGCAATATGTAAAAATAATTACATTATGGATGTGTTTGTGTGGGTCTAGTTGAGTATGCATATTGGAGGATTGGCTACTACGTGTGGTTTTGAACATAGCTTACAGGTAAACTAAGAGCATCTCCGATTGTTCGTTGGTGAATTAGCTGTAGGATTTATTATTCATACCTGAAGCTGGGGTGAATGGGTAAATATACCCTGAGTGCCTTCATGTTCGTGCCCAACTACAAATTTCATTCCAGCCTCTTATTTTTCGAAAATTTAAATGTTTTTTATTTTTTTATTTTTTATTTTATTTTGGAAATTCTCTCTGAGGTGATTGATTGAACATGTTGTTTTGCACGCCTGTTGAATAAATGTCCAAACCCATTTGAATCACACTTTCTCGAGCTTTAGATTTGAACTCTTAGGGGAGTGAACGGGTTGGCTAATTCTGCTTGTTTCCACTATTGGAACTCAAAAATCATAAGAATCATAATTCTTGACATGCTTTTATGAGTAAAGTTTGCTGCTGTGGAATATCCCATTTCAAAATGGTATAGGATGCTCGATAAGGTATAAATTCCAATATCACATGTGTTTCCTCACAAAATCGCTTGTGAATCGGATTAAATTAGTCTTTGTGTCTTGAAAACAAACATGCATATATGTTAAGTCTAGTAATTGAAGACATAAAATGTTACTATTTGCGACTAAGTTTAACATGCTTGTCTGCTTGACACTAATACAGGTGGCTATCCTTGGGAAAGTGAGACATCCTAACATTGTTGCCCTTATAGGAGCATGCTTAGATGCATGTGCCTTGGTCTATGAATTCCTTCCAAATGGAAGCCTTGCAGACCGTCTCTACTGCAAGAACAACACTCCACCTCTTACATGGAGGGAGCGTTCTCGCATAGCTGTTGAAATTTGTTCTGCACTAACATTTCTCCATTCAAATAAACCATCCAGTATAGTTCATGGGGACCTAAAACCCGAAAACATTCTCCTTGATGCCAACAATATAAGCAAGCTTGGTGACTTTGGCATATCACGGCTTCTACTGCAGTCAAGTCAGTCTGTCACTACCATGTTCCACCAAACCCATAGACCTAAGGGAACTTTTGCTTACATAGATCCTGAATTTCTTGATAGTGGAATTCTAACTCGGTACTGTGACATATATTCCTTCGGCATTGTGATCCTCCAGCTAATTACCGGACGGAAGCCATTAGGGATTGTTGATGTGGTAAAGGCAGCAGTGGATGACAAAAGGTTCAGTGAAATAATAGATCCAGGTGCAGGGCGCTGGCCTTACGTGCATGTTAGGAAGCTTGCTAACTTGGGATTGAAATGCTCTAAGAAGAGTAGAAAGGATCGTCCAGATCTTATGGGTGAAGTTTGGAGTGTGCTCAAGCCAATGATGAAGGCTGATTCATTACCCTTGTCCACGGTTGTGCCTGACAATTGTCCTGACCATTTCATTTGTCCATTATCGATGGTACGCCTTACTCAATTCATGCGATGCAGTGCTTGAATTCCTCAACCATGTGTAGTGTTCATAACATATCACTCTTCATGCTTTTTTCTACTGATTTATGTAAGGTTTTATTAATGATTTCCAGGACATAATGCAAGATCCACAGTGTGCAGCGGATGGCTACACATATGAGGCCAAGTGCATGAAATCCTGGTTTAATGAAGGAAACATAAGCTCTCCTGTGACTAATTTACCACTTCCTAGCTTCGATCTTTTTCCTAACCTCTCCCTACGAACTGAAATCAAAGAATGGTTAGCCAAATATAGAAGGACTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008804030.1	3.2e-162	U-box domain-containing protein 33-like
Swissprot	Q8GUH1.2	3.9e-128	Serine/threonine-protein kinase
trEMBL	A0A8B7CQB5	2.3e-162	U-box domain-containing protein 33-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G45910.1	39.25	5e-153	538		U-box domain-containing protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g319433	AT2G45910.1	800	443	12	15	783	46	833	39.25	5e-153	538
g319433	AT3G49060.1	838	451	18	16	783	17	805	31.98	1e-106	384
g319433	AT5G61560.1	806	482	20	16	782	8	793	32.88	1e-103	374

Ortholog group

Species	Genes
Allium cepa	g319433.t1; g319436.t1
Allium fistulosum	AfisC1G09129; AfisC3G03688; AfisC4G04326
Allium sativum	Asa2G02006.1; Asa2G03054.1; Asa2G03055.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	431	683	145.1	2.2e-42
PF04564.12	U-box	Domain	714	782	56.9	1.6e-15

Gene Ontology

Accession	Ontology	Name
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004842	F	ubiquitin-protein transferase activity
GO:0016567	P	protein ubiquitination
GO:0006464	P	cellular protein modification process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016740	F	transferase activity
GO:0019538	P	protein metabolic process
GO:0019787	F	ubiquitin-like protein transferase activity
GO:0032446	P	protein modification by small protein conjugation
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0070647	P	protein modification by small protein conjugation or removal
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09553	STIP1; stress-induced-phosphoprotein 1	EC:-	-	-
K11838	USP7, UBP15; ubiquitin carboxyl-terminal hydrolase 7	EC:3.4.19.12	FoxO signaling pathway	ko04068

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network