result

Gene information

Detail information of g321223


Location
GeneChrStartEndStrand
g321223Scaffold_67096:HRSCAF_4501822115522132+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009406840.11.1e-61PREDICTED: myb-related protein Zm1-like
SwissprotQ9SEZ4.11.4e-50Protein LATERAL ORGAN FUSION 2
trEMBLA0A804JNF97.9e-62(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT1G69560.144.361e-53 206ATMYB105;LOF2;MYB105myb domain protein 105

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag321223.t1
Allium fistulosumAfisC5G02505; AfisC5G02512
Allium sativumAsa4G06068.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain246959.81.9e-16
PF00249.28Myb_DNA-bindingDomain7711852.24.6e-14

Gene Ontology
AccessionOntologyName
GO:0000003Preproduction
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0000976Ftranscription regulatory region sequence-specific DNA binding
GO:0000977FRNA polymerase II regulatory region sequence-specific DNA binding
GO:0000978FRNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000981FRNA polymerase II transcription factor activity, sequence-specific DNA binding
GO:0000987Fcore promoter proximal region sequence-specific DNA binding
GO:0000988Ftranscription factor activity, protein binding
GO:0000989Ftranscription factor activity, transcription factor binding
GO:0001012FRNA polymerase II regulatory region DNA binding
GO:0001067Fregulatory region nucleic acid binding
GO:0001076Ftranscription factor activity, RNA polymerase II transcription factor binding
GO:0001101Presponse to acid chemical
GO:0001134Ftranscription factor activity, transcription factor recruiting
GO:0001135Ftranscription factor activity, RNA polymerase II transcription factor recruiting
GO:0001935Pendothelial cell proliferation
GO:0003006Pdevelopmental process involved in reproduction
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003690Fdouble-stranded DNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0042742Pdefense response to bacterium
GO:0050832Pdefense response to fungus
GO:0005829Ccytosol
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006357Pregulation of transcription from RNA polymerase II promoter
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0046983Fprotein dimerization activity
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0008283Pcell proliferation
GO:0042802Fidentical protein binding
GO:0042493Presponse to drug
GO:0010038Presponse to metal ion
GO:0009414Presponse to water deprivation
GO:0009415Presponse to water
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009617Presponse to bacterium
GO:0009620Presponse to fungus
GO:0009628Presponse to abiotic stimulus
GO:0009651Presponse to salt stress
GO:0009719Presponse to endogenous stimulus
GO:0009723Presponse to ethylene
GO:0009725Presponse to hormone
GO:0009733Presponse to auxin
GO:0009737Presponse to abscisic acid
GO:0009739Presponse to gibberellin
GO:0009741Presponse to brassinosteroid
GO:0009751Presponse to salicylic acid
GO:0009753Presponse to jasmonic acid
GO:0009791Ppost-embryonic development
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009908Pflower development
GO:0009966Pregulation of signal transduction
GO:0009967Ppositive regulation of signal transduction
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010035Presponse to inorganic substance
GO:0010200Presponse to chitin
GO:0010243Presponse to organonitrogen compound
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0010646Pregulation of cell communication
GO:0010647Ppositive regulation of cell communication
GO:0044212Ftranscription regulatory region DNA binding
GO:0010928Pregulation of auxin mediated signaling pathway
GO:0010929Ppositive regulation of auxin mediated signaling pathway
GO:0014070Presponse to organic cyclic compound
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0046677Presponse to antibiotic
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0046686Presponse to cadmium ion
GO:0022414Preproductive process
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0023056Ppositive regulation of signaling
GO:0030154Pcell differentiation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0033993Presponse to lipid
GO:0035670Pplant-type ovary development
GO:0040008Pregulation of growth
GO:0042221Presponse to chemical
GO:0042803Fprotein homodimerization activity
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0048367Pshoot system development
GO:0048437Pfloral organ development
GO:0048438Pfloral whorl development
GO:0048440Pcarpel development
GO:0048467Pgynoecium development
GO:0048481Pplant ovule development
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0048532Panatomical structure arrangement
GO:0048579Pnegative regulation of long-day photoperiodism, flowering
GO:0048580Pregulation of post-embryonic development
GO:0048581Pnegative regulation of post-embryonic development
GO:0048583Pregulation of response to stimulus
GO:0048584Ppositive regulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0048586Pregulation of long-day photoperiodism, flowering
GO:0048608Preproductive structure development
GO:0048638Pregulation of developmental growth
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0050673Pepithelial cell proliferation
GO:0050789Pregulation of biological process
GO:0050793Pregulation of developmental process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051093Pnegative regulation of developmental process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051239Pregulation of multicellular organismal process
GO:0051241Pnegative regulation of multicellular organismal process
GO:0051252Pregulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051302Pregulation of cell division
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0051782Pnegative regulation of cell division
GO:0060255Pregulation of macromolecule metabolic process
GO:0061458Preproductive system development
GO:0065007Pbiological regulation
GO:0071310Pcellular response to organic substance
GO:0071367Pcellular response to brassinosteroid stimulus
GO:0071396Pcellular response to lipid
GO:0071407Pcellular response to organic cyclic compound
GO:0071495Pcellular response to endogenous stimulus
GO:0080050Pregulation of seed development
GO:0080060Pintegument development
GO:0080090Pregulation of primary metabolic process
GO:0080113Pregulation of seed growth
GO:0090567Preproductive shoot system development
GO:0097159Forganic cyclic compound binding
GO:0097305Presponse to alcohol
GO:0098542Pdefense response to other organism
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:1901698Presponse to nitrogen compound
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:1904961Pquiescent center organization
GO:1990837Fsequence-specific double-stranded DNA binding
GO:2000022Pregulation of jasmonic acid mediated signaling pathway
GO:2000026Pregulation of multicellular organismal development
GO:2000028Pregulation of photoperiodism, flowering
GO:2000031Pregulation of salicylic acid mediated signaling pathway
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000241Pregulation of reproductive process
GO:2000242Pnegative regulation of reproductive process
GO:2001023Pregulation of response to drug
GO:2001038Pregulation of cellular response to drug
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09422MYBP; transcription factor MYB, plantEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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