result

Gene information

Detail information of g32164

Location

Gene	Chr	Start	End	Strand
g32164	Scaffold_19239:HRSCAF_191358	1069728	1071192	+

Sequences

CDS

>g32164.t1
ATGGAAGGGTCCGTGGTCGGCAGCGGAGGCGGAGGACCAGCTCCGTTTCTATTAAAAACATACGAGATGGTCGACGATTCGTCGACCGACGACATCGTCTCATGGAGCGACGCGAACAACAGCTTCGTAGTCTGGAACCCTCCCGAATTTGCCGCCAGGTTACTTCCTACTTATTTCAAGCACAATAATTTCTCCAGCTTCATCCGTCAGCTCAACACTTATGGTTTTCGCAAAATAGACCCTGAGCGGTGGGAATTCTCAAACGATGAGTTTGTAAAGAATCAGAAACATTTATTGAAAAACATACATCGTCGGAAACCAATCCATAGCCACAGTAATCCACCTAGCAGTGCGGGATTGGCTCAGTCTGGGTCACTAGATCCTGAGAGAATTGCATTGGAAGAAGAGATTGATAGGTTATCAAGAGAAAAGGCGACGCTTGCGAATGATCTGTGGAGGTTTAAACAGCAGCAGTCTGGAACAAAAGCTCAACTGGATGATCTTGGGAGAAGATTGTTTGATATTGAACAAAGACAGGCAAAAATGATCGATTTTTTTGAGAAGGCAGTGTTGAATCCTAAGTTTGTTGATAATTTGATTAAGATTGCTGGATCTGGAGCTGCAGATTTCGTTAATTTGCATAAAAGGAGAAGGTTACCCGCTTTGGGTTTGGATTATTGCTTGGAAGCAGGAGACAATAGCAGTAATTTTTACGATAATAACGGCAGTAGTAGTAATACACCAAAACATGATGCTGGGCAAGTGTTTAATCAGGATTTTTCCGATAAACTGAAGCTCGGGCTGTGCCCTGCAGCAATTTCCGATGGTAACAACATCCTTGGTGCTACTAGTAGTACATACAGCTCCAATGAAAGAGTTGAGCAGAGTAAAATAAATGGAGGAAAATTGGAGTTTCTTTCATTTGTACCAGATGCTTTAGAGCTTAAGGACACAGGGACTTCTGTTTGTCCTATGAAAAAGTGTTCTGAATCGATTGATGATGAGGATGAGATGATACTTTGTCAGTTAAATCTTACTCTTGTATCTTCACCCATGCAAGTGGACAAGAATGGTACTGCAAGCAAGAGTAGAGGTTCTATGCCTGGGGAAAATGAAACAGGGCACAAAGAGGAGGGCAATGGTGATAGAGAAGTTTTGAAGAATCGAAGTGATGTCACTGCTAGTGATCTTAATGTAAAATCATCTGCTCCTGCTGGAAGAGTGAATGATGTGTTCTGGGAGAAGTTCCTGACTGAAAGTCCAGGTCCTTCGGATACTGAAGATGTTACGATATCGGATCATGGTGATGAGCAAATAGAAGAAACAAAGAATGAGTCAAGCAGCATGCTGCAGAACAGAAAGGATATGGAGCAGCTGACACTGTAA

Protein

Gene

>g32164.t1
ATGGAAGGGTCCGTGGTCGGCAGCGGAGGCGGAGGACCAGCTCCGTTTCTATTAAAAACATACGAGATGGTCGACGATTCGTCGACCGACGACATCGTCTCATGGAGCGACGCGAACAACAGCTTCGTAGTCTGGAACCCTCCCGAATTTGCCGCCAGGTTACTTCCTACTTATTTCAAGCACAATAATTTCTCCAGCTTCATCCGTCAGCTCAACACTTATGTACGACTACATACGTAAATCGATTCACTTCTATCGCTCTTCTTGTTGACTGATTCAATTATCTGTTTTGACAATTTAGGGTTTTCGCAAAATAGACCCTGAGCGGTGGGAATTCTCAAACGATGAGTTTGTAAAGAATCAGAAACATTTATTGAAAAACATACATCGTCGGAAACCAATCCATAGCCACAGTAATCCACCTAGCAGTGCGGGATTGGCTCAGTCTGGGTCACTAGATCCTGAGAGAATTGCATTGGAAGAAGAGATTGATAGGTTATCAAGAGAAAAGGCGACGCTTGCGAATGATCTGTGGAGGTTTAAACAGCAGCAGTCTGGAACAAAAGCTCAACTGGATGATCTTGGGAGAAGATTGTTTGATATTGAACAAAGACAGGCAAAAATGATCGATTTTTTTGAGAAGGCAGTGTTGAATCCTAAGTTTGTTGATAATTTGATTAAGATTGCTGGATCTGGAGCTGCAGATTTCGTTAATTTGCATAAAAGGAGAAGGTTACCCGCTTTGGGTTTGGATTATTGCTTGGAAGCAGGAGACAATAGCAGTAATTTTTACGATAATAACGGCAGTAGTAGTAATACACCAAAACATGATGCTGGGCAAGTGTTTAATCAGGATTTTTCCGATAAACTGAAGCTCGGGCTGTGCCCTGCAGCAATTTCCGATGGTAACAACATCCTTGGTGCTACTAGTAGTACATACAGCTCCAATGAAAGAGTTGAGCAGAGTAAAATAAATGGAGGAAAATTGGAGTTTCTTTCATTTGTACCAGATGCTTTAGAGCTTAAGGACACAGGGACTTCTGTTTGTCCTATGAAAAAGTGTTCTGAATCGATTGATGATGAGGATGAGATGATACTTTGTCAGTTAAATCTTACTCTTGTATCTTCACCCATGCAAGTGGACAAGAATGGTACTGCAAGCAAGAGTAGAGGTTCTATGCCTGGGGAAAATGAAACAGGGCACAAAGAGGAGGGCAATGGTGATAGAGAAGTTTTGAAGAATCGAAGTGATGTCACTGCTAGTGATCTTAATGTAAAATCATCTGCTCCTGCTGGAAGAGTGAATGATGTGTTCTGGGAGAAGTTCCTGACTGAAAGTCCAGGTCCTTCGGATACTGAAGATGTTACGATATCGGATCATGGTGATGAGCAAATAGAAGAAACAAAGAATGAGTCAAGCAGCATGCTGCAGAACAGAAAGGATATGGAGCAGCTGACACTGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	QBC36003.1	2.4e-133	heat shock transcription factor A5
Swissprot	Q6K6S5.1	1.3e-104	Heat stress transcription factor 6
trEMBL	A0A411JIC1	1.7e-133	Heat shock transcription factor A5

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G13980.1	46.85	4e-97	352	AT-HSFA5;HSFA5	winged-helix DNA-binding transcription factor family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g32164	AT4G13980.1	476	190	15	16	461	24	466	46.85	4e-97	352
g32164	AT3G02990.1	208	105	1	15	221	23	230	49.04	4e-57	219
g32164	AT5G16820.2	474	254	15	15	460	27	468	33.76	6e-57	218

Ortholog group

Species	Genes
Allium cepa	g32164.t1
Allium fistulosum	AfisC5G06160
Allium sativum	Asa4G05278.1
Arabidopsis thaliana	AT4G13980.1
Oryza sativa	LOC_Os02g29340.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00447.14	HSF_DNA-bind	Family	16	105	107.8	3e-31

Gene Ontology

Accession	Ontology	Name
GO:0003674	F	molecular_function
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K09419	HSFF; heat shock transcription factor, other eukaryote	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network