result

Gene information

Detail information of g327801

Location

Gene	Chr	Start	End	Strand
g327801	Scaffold_67954:HRSCAF_451040	668662	670735	-

Sequences

CDS

Protein

Gene

>g327801.t1
ATGGTGCTCAATCAACCATACATAGCTTTGGCAGTCCTCGCCACATTATTATACTATCTCTCTTTTATCCACCGCCGGCGTCCTACGAATTCCTCATCCCGAAACCCTCCTTTACCGCCTGGTCCGGCGGGCTTAGCGATCGTGGGCAGCCTGCCGTTCCTAGACCCAGAACTTCACACCTTCTTCGCGGGCCTCGCCAAGGCCCATGGCCCTATATACACTCTCAAATTTGGGTTTAAACTCGGTATCATCTCCGGACTTGGCTCGGGAGGCACTTCGGGACAACGAAGCTGTTTTGGCGAACAGAGACGTGCCGGCCGTTGTCCGTGTTATTTGCTTACGGGGGCTCTGATATTGTATTGACTCCTGATAGGCCCACATGGCGGATGCTGCGTAGGGTCTGCGTGCAGCAGATGCTCAGCCCCTCTAGCTTGGATTCCTTTTACTATCTTAGAAGACGCGAGGTAATGTCTACATTTGGCTTCTTGTTTTTAGACCACTTCTTGTTCTGTTGACAACCCCACTTTTCAACACTTTGAATTGAATAAATTCACCTTTACACTTAGAAGGATATGAAAAGGCAAAGTGTTCGTCCTTTTATTGTATTTGCAACAAATACTTACAAAAATGAATTAGAACATCGAAGAATTTACCCTTTAAATGTATTTTTGCAATAAAACAATAAACGTTTTATCTTTTTAATAACCAATACTAGAGCAATCAGTCATCATTTGGATGTGTGGTTAGTTTACCGAAATGAATAAACCACGTCTGAAAAGGAGGTTATTAAAACGGCAGAGGTACATGGCTGCATATTAACTAAACCGGCAATCATGTTGCCATTTTAGTTACACAACTTAAAATGACAATCGTTTTAAATGTAAAACTGGATATGTGGTTAGTTTGTGTACTTCTAGATGAAAGAGTTGTTTTGTTCGGTTTTTCCAGCGCAGAAAGTATGAAGTGAACAGACCAATCTTTGGGAATGGTTTAATAATTAGGTGTAAAACAGACACCTTTTGCAAGAGCTTACATACATGTCTGATTTGCCTACTTATTTTCAGAAGAAAAAAAAGAGAGGAAAATGTTGTGCTTTTTTAGCTAGAGTCGTATCAACCTACTAATTTGACAATGCAAAATTGATATGTTTTCTCCATCAATTTTTAGATGGTGTCAACGATTCGTCGCCTTCGTGAGTCATCTGGAAAACCAGTTGATGTAGGAGCTCAGGTTTTTCTTTCTGTATTAAATGTCGTAACAAGCGTGTTATGGGGTGGGAAAATGGAGAATGAAAAAAAATATAGAGGTTGGAATCGAGTTTCGAGAATTGGTAGGTTATATTACAGATTCATTAGGTAAACCCAATGTGTCTGATTTTTCCCCTGCATTGGAAAAGTTCTATATACAAGGGATATCGAAGAAAATGAGAGTGTATCTTGGAAGGTTTGATAGTATATTTGAAAGAATAATCGAGCAAAGGATGAATAACAAAGAGAAGTGCAGCGGAGGAGCAAAGACATGTTGGATTTTATGCTGAATTTAGTGGCCAAAGGCAGTGATAGTAATCTTCCTTTCACCATCACTCATGTCAAAGCTCTTCTAATGGTAAGTTATCTTATGTGTTTAAGCTTAAATAGTTCATTTTGCCATTCCTTAGCATTCTATGAACATAAACAGAAGTAAGAGTTTTCACTGTGAATTAGGACATGGTGGTGGGTGGAACAGAAACAACATCAAACACGGTTGAATGGGCAATAGCAGAAATGATGAACATACCTGAAACAATGGAAAAGGCACGGGAAGAACTCTAACAAGTAGTTGGATAAAACAACAAAGTAGAAGAGCCACATATACCAATACTGCACTATATAAGCTCAATAATGAAGGGGGTTTTACGACTACACCTGCTCTACCGTTATTAGTCCCACATTTCCCGAGCACATCATGCACAATTGGAGGCTACAGTGTTCCAGAAGGTAGTAGAGTGTTCATTAATGTATGGGCCATATATAGTAACTCTTCTGTCTGGGACAACCCTAATGGATTTTTGCTTGAAAGGTTTTTGAAGGGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020079698.1	8.9e-52	geraniol 8-hydroxylase-like
Swissprot	O22203.1	8.2e-10	p-coumaroylshikimate/quinate 3'-hydrolxylase
trEMBL	A0A199VJW8	6.4e-52	Geraniol 8-hydroxylase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G12300.1	39.39	5e-30	128	CYP706A4	cytochrome P450, family 706, subfamily A, polypeptide 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g327801	AT4G12300.1	198	83	5	6	174	17	206	39.39	5e-30	128
g327801	AT4G12300.1	222	120	5	112	303	221	432	27.93	1e-17	87.4
g327801	AT4G12320.1	198	89	5	6	174	17	206	36.36	2e-26	116

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	248	302	45.2	4.8e-12

Gene Ontology

Accession	Ontology	Name
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0010033	P	response to organic substance
GO:0019748	P	secondary metabolic process
GO:0042221	P	response to chemical
GO:0044550	P	secondary metabolite biosynthetic process
GO:0050896	P	response to stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00512	CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase	EC:1.14.14.19 1.14.14.32	Steroid hormone biosynthesis	ko00140
			Ovarian steroidogenesis	ko04913
			Prolactin signaling pathway	ko04917
			Cortisol synthesis and secretion	ko04927

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network