result

Gene information

Detail information of g327805

Location

Gene	Chr	Start	End	Strand
g327805	Scaffold_67954:HRSCAF_451040	752573	755907	-

Sequences

CDS

>g327805.t1
ATGATCTGTGATTCTGAAAACGATGCTGAAAATCATTTGCCTGTGATTGACTCTGAATTTTTGGACGATTGTTATTTGCAATCGGTTGCGTCTCTTGGGTGGAGTTACATTGATCTTGGTGGGATCATGAACGCTAGAGAGAAGGCTTTGTTTGATAAAGTTTGGTTGGATTTTTTGCAAGTTGACTTAAAACAACGGCGTGCAAGCTGGCTACTACTAATAGCAGTCCCTGCTCCACTAATCATCATGGAGTTCAATCAGTTATACATTGCTTTGGCACTCCTCGCTGCCTTATTCTACTATATCTCTATTATCCACCGCCGGCGTCCTACGAATTCCTCATCCAGAAACCCTCCTTTACCGCCCGGTCCGGCGGGCTTACCGGTCGTGGGCAGCCTGCCGTTCCTGGACCCAGAACTTCACACCTACTTCGCGGGCCTCGCCAAGGCCCACGGCCCCATGTACACTATCAAATTAGGGTCGAAACTCGGTATCGTGATATCATCTCCGGACTTGGCTCGGGAGGCACTTCGGGACAACGACGCTGTTTTGGCGAATAGAGACGTGCCGGCCGCCGCCCGTGTTATTGCTTACGGCGGTTCTGATATTGTCTGGACTCCTAATGGGCCCACATGGCGGATGCTGCGTAGGGTCTGTGTGCAGCAGATGCTCGGCCCCTCTAGCTTGGATTCCTTGTACTATCTTAGAAGACGCGAGATGATGTCAACGATCCGTCAGCTTCACGAGTCATCGGGAAAACCAGTTGATGTGGGAACTCAAGTTTTCCTTTCTGTATTAAATGTTATAACAAGCGTGTTATGGGGAGGAACAATGGACAATGATAAGAATAGAGAGATTGGAAACGAGTTCCGAGAGTTGGTAGGATATATTACAGATTTGTTAGGGAAACCCAATGTGTCCGATTTTTTCCCTGCATTGGCAAAATTCGATATACAAGGGATATCGAAGAAGATGAGAGTGTATCTTGGGAAGTTTGATAGCATATTTGAAAGAATAATCGAGCAAAGGATGAATAACGAAGAAAAAAGCAGCGGAGGAGCGAAAGATATGTTGGATTTTATGCTGGATTTAGTGGCTGAAGGTGGTGATAGTAATCTTCCTTTCACCATGAGTCATGTCAAGGCTCTTCTAATGGACATGGTGGTGGGTGGAACAGAAACAACATCAAACACGGTAGAATGGGCAATAGCAGAAATGATGAACAGACCTGAAACAATGGAAAAGGCACGAGAAGAACTAGAACAAGTAGTTGGAAAAAACAACATAGTAGAAGAGTCACATGTACCAAAACTGCACTATATAAGCTCAATAATGAAGGAGGTTTTACGACTACACCCTGCTCTACCGTTGTTAGTCCCACATTGCCCGAGCACATCATGCACAATTGGAGGCTACAGTGTTCCAGAAGGTAGTAGAGTGTTCATTAATGTATGGGCCATACATAGAGATTCTTCTGTCTGGGACAACCCTAACGAATTTTTGCCTGAAAGGTTTTTTGAAGGGGGTAGTAAGTATGAATATAATGGGAAGGACTTTAAGTATTTCCCTTTTGGTTCAGGAAGAAGAATATGTGCAGGAATTTCCATGGCGGAGAGGATGAGTATGTATACAGTTGCTTCATTGCTCCATAATTTTGAATGGAAGTTGGAAGTTGGACAAAGTATCGACCTTGATGAGAAGTTCGGTATTGTTTTGAAGAAGGCTAGGCCTCTTGTTGCTATACCTACACCTAGATTTGCTAACTCTGAACTCTATTCTTGA

Protein

Gene

>g327805.t1
ATGATCTGTGATTCTGAAAACGATGCTGAAAATCATTTGCCTGTGATTGACTCTGAATTTTTGGACGATTGTTATTTGCAATCGGTTGCGTCTCTTGGGTGGAGTTACATTGATCTTGGTGGGAGTTTCTTCGATTAGACACTAATTGAAAACCATCTTCATCAATAATCGAAAGTTTTTATAAGGATTTTGTTGTGAATGAAGATTGAGATTTGACAAGGAATGAAGATAAAATGAGGCAGAAGAAGATACTTCGTTCTGATCTTAGGTTTTCGGTATAAAAAGATTATCGGTAACATTCATGTCAGTCATGAACGCTAGAGAGAAGGCTTTGTTTGATAAAGTTTGGTTGGATTTTTTGCAAGTTGACTTAAAACAACGGCGTGCAAGCTGGGTAAAAGCCAGCGCAGCTCAAACCCATGGAACATGCAAATGTTTTTCTAAATTCGGTGACGATGATGACAAAGACATTTAATTTAGTACTGACTTCCAGTTTATTATTGCAGAAATATTTTGCCGGCAATGGCATTCCACCCACAAAATTCACAATATTTTAAACCACACCCTAAAACGACCTTATCAAATCTACCGCAATGGACTGTATAGAAAGGCATCTATGTTTTCTCCCAAGAGAATAATTTCATCCTTCATTCGGCTATACATCATCGTCTCCAACAATTAATAGACAATTCTATCTGTAGCTACTACTAATAGCAGTCCCTGCTCCACTAATCATCATGGAGTTCAATCAGTTATACATTGCTTTGGCACTCCTCGCTGCCTTATTCTACTATATCTCTATTATCCACCGCCGGCGTCCTACGAATTCCTCATCCAGAAACCCTCCTTTACCGCCCGGTCCGGCGGGCTTACCGGTCGTGGGCAGCCTGCCGTTCCTGGACCCAGAACTTCACACCTACTTCGCGGGCCTCGCCAAGGCCCACGGCCCCATGTACACTATCAAATTAGGGTCGAAACTCGGTATCGTGATATCATCTCCGGACTTGGCTCGGGAGGCACTTCGGGACAACGACGCTGTTTTGGCGAATAGAGACGTGCCGGCCGCCGCCCGTGTTATTGCTTACGGCGGTTCTGATATTGTCTGGACTCCTAATGGGCCCACATGGCGGATGCTGCGTAGGGTCTGTGTGCAGCAGATGCTCGGCCCCTCTAGCTTGGATTCCTTGTACTATCTTAGAAGACGCGAGGTAATGTCTACATTTGGTTTCTTGCTTTCAGACAGCTTCCAACAATAATTTTTTAGGAGGTTCAAGTACAAATGAAAAGGTGAAGTGTTTGTCTTTTTATTGTTTTTGCAATAAAACAGCAAATACTTCCAAAAATGAATAAACATCAAAGTATTTCGCTTTTTAAATGTATTTTTGCGATAAATCAATAAACATTTTTATCATTTTAATAACCAAACCTATAGTAGTTAGTTGTTATGGCCGTAGTTTGGATGTGTGGTTGGTTTTAGGAAATGTACAAACCAAATTGAATGAACAAAGCACTGTTGAATGTGCTCTTATATCATCAACTTTCACTCTACTTGTCAAATTATGCAGCTAAGACAGAAAATTCGTCCTTTACCTCAATTTGTAACAAAAGTCCATTTTTTTCATATTAACATTGTTCATTGTAGAAATATATTACTCAATGACCCTGACTGTTATCTCAACTGTTAAAACATTGACTTATTTTTTATTGTTACTAGATAATTTGAGTTCGATCTCTAAGCATAAATTAACAACTATTTTCAAACGCCAAGGGGAAAAAAATGGAAAACCACCACTAAGGTTGAAATTGAAATTGATTCCTTTGTTGTCCATGCATTCACAATATTAATGGCTCTTTTGGATGGACTTAAATAAAACTATTTTTTGGTTTTTTGAAAGCAAAAATGAATTGCTTTTGACTTTCAAAAATCTAAAAAGTAATTTATTTAAGTATATCCAACGAACCATTTGTATGAAAGAATGCTCAGCGAATAAAAGAGCATGGATTATGCGAAAGATGAAAGAGTTGAATTTTAACAACATATATACACCTTTTGCAAGAGCTTACATACATGTTTTGAGAAGAAAAAAAAGGGCGTGTTTTAGAGCTAGAGTCATAACAACTGACTAATTTGACAATGCAAAATTTATTATTTGATGTCTTCTCCATCAATTTTTAGATGATGTCAACGATCCGTCAGCTTCACGAGTCATCGGGAAAACCAGTTGATGTGGGAACTCAAGTTTTCCTTTCTGTATTAAATGTTATAACAAGCGTGTTATGGGGAGGAACAATGGACAATGATAAGAATAGAGAGATTGGAAACGAGTTCCGAGAGTTGGTAGGATATATTACAGATTTGTTAGGGAAACCCAATGTGTCCGATTTTTTCCCTGCATTGGCAAAATTCGATATACAAGGGATATCGAAGAAGATGAGAGTGTATCTTGGGAAGTTTGATAGCATATTTGAAAGAATAATCGAGCAAAGGATGAATAACGAAGAAAAAAGCAGCGGAGGAGCGAAAGATATGTTGGATTTTATGCTGGATTTAGTGGCTGAAGGTGGTGATAGTAATCTTCCTTTCACCATGAGTCATGTCAAGGCTCTTCTAATGGTAAGTTATCTAATGTATTTAGGCTTAAATAGTTTTTGACATTCCTAGCATTCTACGAACATAAATAAAATTAAGAGCATTCACTGTGAAATAGGACATGGTGGTGGGTGGAACAGAAACAACATCAAACACGGTAGAATGGGCAATAGCAGAAATGATGAACAGACCTGAAACAATGGAAAAGGCACGAGAAGAACTAGAACAAGTAGTTGGAAAAAACAACATAGTAGAAGAGTCACATGTACCAAAACTGCACTATATAAGCTCAATAATGAAGGAGGTTTTACGACTACACCCTGCTCTACCGTTGTTAGTCCCACATTGCCCGAGCACATCATGCACAATTGGAGGCTACAGTGTTCCAGAAGGTAGTAGAGTGTTCATTAATGTATGGGCCATACATAGAGATTCTTCTGTCTGGGACAACCCTAACGAATTTTTGCCTGAAAGGTTTTTTGAAGGGGGTAGTAAGTATGAATATAATGGGAAGGACTTTAAGTATTTCCCTTTTGGTTCAGGAAGAAGAATATGTGCAGGAATTTCCATGGCGGAGAGGATGAGTATGTATACAGTTGCTTCATTGCTCCATAATTTTGAATGGAAGTTGGAAGTTGGACAAAGTATCGACCTTGATGAGAAGTTCGGTATTGTTTTGAAGAAGGCTAGGCCTCTTGTTGCTATACCTACACCTAGATTTGCTAACTCTGAACTCTATTCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_026657221.1	9.8e-196	LOW QUALITY PROTEIN: geraniol 8-hydroxylase-like
Swissprot	D1MI46.1	4.5e-97	Geraniol 10-hydroxylase
trEMBL	A0A8B8J0M4	1.4e-196	geraniol 8-hydroxylase-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G12300.1	52.38	2e-163	572	CYP706A4	cytochrome P450, family 706, subfamily A, polypeptide 4

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g327805	AT4G12300.1	504	231	3	91	592	19	515	52.38	2e-163	572
g327805	AT4G12320.1	506	237	4	91	592	19	517	50.99	9e-161	563
g327805	AT4G12330.1	469	207	6	129	592	55	517	53.52	2e-151	532

Ortholog group

Species	Genes
Allium cepa	g327805.t1
Allium fistulosum	AfisC2G06170
Allium sativum	Asa6G03642.1
Arabidopsis thaliana	AT4G12300.1; AT4G12310.1; AT4G12320.1; AT4G12330.1; AT5G44620.1
Oryza sativa	LOC_Os01g50490.1; LOC_Os08g43440.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	121	576	336.8	1.7e-100

Gene Ontology

Accession	Ontology	Name
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0016020	C	membrane
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009733	P	response to auxin
GO:0010033	P	response to organic substance
GO:0019748	P	secondary metabolic process
GO:0042221	P	response to chemical
GO:0044550	P	secondary metabolite biosynthetic process
GO:0050896	P	response to stimulus

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00512	CYP17A; steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone deacetylase	EC:1.14.14.19 1.14.14.32	Steroid hormone biosynthesis	ko00140
			Ovarian steroidogenesis	ko04913
			Prolactin signaling pathway	ko04917
			Cortisol synthesis and secretion	ko04927

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network