Gene information

Detail information of g329409

Location

Gene	Chr	Start	End	Strand
g329409	Scaffold_68186:HRSCAF_451272	124669	125490	-

Sequences

CDS

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008794348.1	3.6e-60	WRKY transcription factor WRKY76-like
Swissprot	Q9SAH7.1	6.8e-48	WRKY DNA-binding protein 40
trEMBL	A0A8B7C975	2.6e-60	WRKY transcription factor WRKY76-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G80840.1	40.61	2e-52	202	ATWRKY40;WRKY40	WRKY DNA-binding protein 40

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g329409	AT1G80840.1	293	127	9	13	266	12	296	40.61	2e-52	202
g329409	AT4G31800.2	273	105	8	38	268	48	307	41.39	3e-43	172
g329409	AT4G31800.1	273	105	8	38	268	49	308	41.39	3e-43	172

Ortholog group

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03106.12	WRKY	Domain	137	195	88.7	2e-25

Gene Ontology

Accession	Ontology	Name
GO:0001101	P	response to acid chemical
GO:0008150	P	biological_process
GO:0042493	P	response to drug
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009620	P	response to fungus
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009751	P	response to salicylic acid
GO:0010033	P	response to organic substance
GO:0010200	P	response to chitin
GO:0010243	P	response to organonitrogen compound
GO:0014070	P	response to organic cyclic compound
GO:0046677	P	response to antibiotic
GO:0042221	P	response to chemical
GO:0043207	P	response to external biotic stimulus
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:1901698	P	response to nitrogen compound
GO:1901700	P	response to oxygen-containing compound

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network