result

Gene information

Detail information of g33154

Location

Gene	Chr	Start	End	Strand
g33154	Scaffold_19720:HRSCAF_194669	88089	91306	-

Sequences

CDS

>g33154.t1
ATGTACTCTTCAATTCAAGTTCTGGACTTGTCAAGAAATCGAATTTCAGACAGCTATTTTTTGAATTTTTACCTTTCAAATTGCCATAACATCAAGTACCTCAACTTATCCGACAATAAGTTTACCGGAAAGCTTCCGGAAACTATCTCTACTTCATGTTCTAACCTAACTATACTTGATTTATCGTTCAATCTCATATCGGGTCAAATACCTTCACATTTCGTATCCAATGCACCAGCTAGTCTACAACATTTAGACCTCTCTCATAACAACTTTTCAGGAGATTTTTCCAAGTACAACTTTGGAGAATGCAAAAGAATCACGACCATTGATATATCATCCAACGGTCTTAATGGAAGTAGCCTTCCATTGAGTTTAACCAACTGCAAGCTTCTAGAAACTCTTGCATTATCCAGTAACAATTTTAGCGGCCAGTTGCCTACTTTCTGGGCTAGCTTATCTAACTTGAAGCACTTATCACTGAGTGACAATAAATTTTCAGGGCAAATACCATATGAAGTTGGACATGCATGCAGGACCCTTATCGACTTAGACTTATCTGGAAATCAACTTATCGGTGAACTCCCAAGTACATTCATCGGGTGCCGATTTCTTGAAAGATTAAACCTCGGCCATAATGGATTATCTGGAAACTTTGTTGAAGAAGTTATAAGTACAATCACAACTTTGAAATTTCTTTATATTCCATTTAATAATCTTTCGGGTTCACTTCCATTGAAGCCATTGAGAAATTGTACCCTTCTTGAAGTTATAGACCTCAGTTCGAATGATTACTCTGGTGGTATCCCAACCGGGTTTGGATTTTGCAAGTCCATCACTAACCTTACCAAGCTGATGTTTCCAAATAATTTGATAACAGGCAGCATTCCACCAGAGTTTGGCACATGCATAAATTTAAAATCAGTGGACTTTAGCTTCAACTACTTGAACGGCCCGATTCCTTCTGAAATATGGTCACTGCCGAAACTAACGGATCTGATAATGTGGGCGAATAACCTTGAAGGCGAAATTCCTGAAAATATATGCAAGGATACAATAGCCATTTCGAATATTGAGATGTTGATCCTTGGCTACAATAAGTTATCGGGGATCGGAAACTTGAAGAAACTTGCAATACTTCAGTTGGGAAACAATGTACTGTCAGGTTTAATTGCACCAGGTATGGTATCTGGAAAGCATTTTGCTTTCTTGAGAAATGAAGCTGGAAACATCTGTCCTGGAGCAGGAGTTCTGTTTGAATTTGAAGGTATCAGACCTGAAAGACTTGCAAATTTTCCAGTAGTGAATTCGTGTCCATCAACTAGAATATATACGGGCACGACTGTTTATACTTTCGGTGGCAATGGGAGCATAATATACATGGATTTGTCTTACAATCTTCTTAATGGGTCCATACCCTCTGAGTTTGGGCCTATGAAGTTCCTCCAAGTGCTGAATTTGGGCCATAACGAGTTAACGGGTAGGATACCGACGTCTTTTGGAGGAATGAAGACACTTGGTGTTTTAGATCTTTCGCATAATCAGCTGAGCGGGAACATCCCTGGTGATTTGGCTAGTCTATCTTTTCTGAACGATATGGATGTGTCGTATAATAATTTATCCGGCCCAATTCCCACCGGCGGCCAGTTCAGTACATTTTTGCCATCGAGGTATGATCACAATTTGGGCCTTTGTGGGGTCCCGTTGCCTCGGTGTGGGTCCGTCACACTACTTGTTGCGCTTTATAGAATCCGAAAATACCATAAAAACGGAGAAGGTAAGAATTCGTATGTTCAAAGTTTTACGAATTCTGTCAGCACCAATGGCGGCGGTGAAACATCGAACTGGAAATTCTCGACCGACCCAGCAAAAATCACGTTAGAGACATTCGACAAACCATTAAGAAACTTAACGTTCGCTCATTTAGTGGAGGCCACAAATGGGTTCAGCCCGGACACCCTTATCGGGTCAGGCGGGTTCGGTGACGTGTTCAAGGCGAAACTTGGGGACGGGTCTACCGTCGCGGTCAAGAAGCTCGTTCGGTTCGCGGGCCAAGGAGACCGTGAGTTCACCTCCGAGATGGAGACCATAGGCAAAATCAAGCATAGGAACCTAGTGCCATTGCTAGGCTACTGCAAAGTGAACGAGGAACGGATCCTGGTGTACGAGTACATGAAGCACGGAAGCCTCGACGTGTCGATTCAAACCAAACGTCAGTCTCTGGACTGGGCCACGAGGAAGAAGATCGCGATAGGGGCGGCCCGTGGGCTCGCTTTCCTTCACCATAGCTGCATCCCTCATATCATACATAGGGACATGAAATCGAGCAACGTGCTGCTTGATGAAAATTTCAATGCACGGGTGTCGGATTTCGGGATGGCCCGGTTGATGAATGCCGTGGATACCCATTTGAGTGTGAGCACGCTAGCGGGTACGCCTGGGTATGTACCTCCGGAATACTATCAAAGCTTTAGGTGCACCACCAAAGGGGATGTGTACAGTTATGGTGTGGTGCTTTTGGAGCTATTAACGGGTAGGAAGCCCATCGACCCGTTGGATTTCGGGGATAATAACTTGGTTGGTTGGGCCAAGAATTTGGCGAAGGAGAATCGGAGTGGGGAAATATTTGATGGAGAGTTGATGGGGAGGAATTCGGGTGAGGGGGAGGTTTATAGGTGTTTGAAGATAGCGTTTGAGTGCTTGGATGATAGACCGTTTAAGAGACCAACTATGATTCAGGTAATGGCTATGTTTAAAGAGATCGATCAAGCTGATTTTGATAGTGAGTTTTCTGATGCGTTTTCGATTGGGAAGTCTGTTATTGATGAAAAAGGGCCTTGA

Protein

Gene

>g33154.t1
ATGTACTCTTCAATTCAAGTTCTGGACTTGTCAAGAAATCGAATTTCAGACAGCTATTTTTTGAATTTTTACCTTTCAAATTGCCATAACATCAAGTACCTCAACTTATCCGACAATAAGTTTACCGGAAAGCTTCCGGAAACTATCTCTACTTCATGTTCTAACCTAACTATACTTGATTTATCGTTCAATCTCATATCGGGTCAAATACCTTCACATTTCGTATCCAATGCACCAGCTAGTCTACAACATTTAGACCTCTCTCATAACAACTTTTCAGGAGATTTTTCCAAGTACAACTTTGGAGAATGCAAAAGAATCACGACCATTGATATATCATCCAACGGTCTTAATGGAAGTAGCCTTCCATTGAGTTTAACCAACTGCAAGCTTCTAGAAACTCTTGCATTATCCAGTAACAATTTTAGCGGCCAGTTGCCTACTTTCTGGGCTAGCTTATCTAACTTGAAGCACTTATCACTGAGTGACAATAAATTTTCAGGTAGTGCAAAGTGCAAACTCTCCATATATATTTTTCTTTCTGCCGTATATACTTTTACTATCTGTAAATAAAATTTACGTAATTTTCAGGGCAAATACCATATGAAGTTGGACATGCATGCAGGACCCTTATCGACTTAGACTTATCTGGAAATCAACTTATCGGTGAACTCCCAAGTACATTCATCGGGTGCCGATTTCTTGAAAGATTAAACCTCGGCCATAATGGATTATCTGGAAACTTTGTTGAAGAAGTTATAAGTACAATCACAACTTTGAAATTTCTTTATATTCCATTTAATAATCTTTCGGGTTCACTTCCATTGAAGCCATTGAGAAATTGTACCCTTCTTGAAGTTATAGACCTCAGTTCGAATGATTACTCTGGTGGTATCCCAACCGGGTTTGGATTTTGCAAGTCCATCACTAACCTTACCAAGCTGATGTTTCCAAATAATTTGATAACAGGCAGCATTCCACCAGAGTTTGGCACATGCATAAATTTAAAATCAGTGGACTTTAGCTTCAACTACTTGAACGGCCCGATTCCTTCTGAAATATGGTCACTGCCGAAACTAACGGATCTGATAATGTGGGCGAATAACCTTGAAGGCGAAATTCCTGAAAATATATGCAAGGATACAATAGCCATTTCGAATATTGAGATGTTGATCCTTGGCTACAATAAGTTATCGGGTACGATCCCTGAGTCGCTTGCATACTGCACAAATTTAATATGGGTGTCTTTATCAGGTAATAAGTTTAGTGGAAAAATCCCTGTAGGGATCGGAAACTTGAAGAAACTTGCAATACTTCAGTTGGGAAACAATGTACTGTCAGGTAATATTCCTCCTGATATCGGGAACTGTGAGAGTTTGATATGGTTGGATTTGACTAATAACTCGCTATCGGGTCCGATACCGGGTTCCATTGCTGCTCAAACAGGTTTAATTGCACCAGGTATGGTATCTGGAAAGCATTTTGCTTTCTTGAGAAATGAAGCTGGAAACATCTGTCCTGGAGCAGGAGTTCTGTTTGAATTTGAAGGTATCAGACCTGAAAGACTTGCAAATTTTCCAGTAGTGAATTCGTGTCCATCAACTAGAATATATACGGGCACGACTGTTTATACTTTCGGTGGCAATGGGAGCATAATATACATGGATTTGTCTTACAATCTTCTTAATGGGTCCATACCCTCTGAGTTTGGGCCTATGAAGTTCCTCCAAGTGCTGAATTTGGGCCATAACGAGTTAACGGGTAGGATACCGACGTCTTTTGGAGGAATGAAGACACTTGGTGTTTTAGATCTTTCGCATAATCAGCTGAGCGGGAACATCCCTGGTGATTTGGCTAGTCTATCTTTTCTGAACGATATGGATGTGTCGTATAATAATTTATCCGGCCCAATTCCCACCGGCGGCCAGTTCAGTACATTTTTGCCATCGAGGTATGATCACAATTTGGGCCTTTGTGGGGTCCCGTTGCCTCGGTGTGGGTCCGGTGATCCAAATTCAAATTCAAGTTCAAAGGGAAGAAGAAGAATCTTTGGTGGTGGAAGTATGATAGTCGGTATAGTCTTTGCTTTCCTCATCATAGTCACACTACTTGTTGCGCTTTATAGAATCCGAAAATACCATAAAAACGGAGAAGGTAAGAATTCGTATGTTCAAAGTTTTACGAATTCTGTCAGCACCAATGGCGGCGGTGAAACATCGAACTGGAAATTCTCGACCGACCCAGCAAAAATCACGTTAGAGACATTCGACAAACCATTAAGAAACTTAACGTTCGCTCATTTAGTGGAGGCCACAAATGGGTTCAGCCCGGACACCCTTATCGGGTCAGGCGGGTTCGGTGACGTGTTCAAGGCGAAACTTGGGGACGGGTCTACCGTCGCGGTCAAGAAGCTCGTTCGGTTCGCGGGCCAAGGAGACCGTGAGTTCACCTCCGAGATGGAGACCATAGGCAAAATCAAGCATAGGAACCTAGTGCCATTGCTAGGCTACTGCAAAGTGAACGAGGAACGGATCCTGGTGTACGAGTACATGAAGCACGGAAGCCTCGACGTGTCGATTCAAACCAAACGTCAGTCTCTGGACTGGGCCACGAGGAAGAAGATCGCGATAGGGGCGGCCCGTGGGCTCGCTTTCCTTCACCATAGCTGCATCCCTCATATCATACATAGGGACATGAAATCGAGCAACGTGCTGCTTGATGAAAATTTCAATGCACGGGTGTCGGATTTCGGGATGGCCCGGTTGATGAATGCCGTGGATACCCATTTGAGTGTGAGCACGCTAGCGGGTACGCCTGGGTATGTACCTCCGGAATACTATCAAAGCTTTAGGTGCACCACCAAAGGGGATGTGTACAGTTATGGTGTGGTGCTTTTGGAGCTATTAACGGGTAGGAAGCCCATCGACCCGTTGGATTTCGGGGATAATAACTTGGTTGGTTGGGCCAAGAATTTGGCGAAGGAGAATCGGAGTGGGGAAATATTTGATGGAGAGTTGATGGGGAGGAATTCGGGTGAGGGGGAGGTTTATAGGTGTTTGAAGATAGCGTTTGAGTGCTTGGATGATAGACCGTTTAAGAGACCAACTATGATTCAGGTAATGGCTATGTTTAAAGAGATCGATCAAGCTGATTTTGATAGTGAGTTTTCTGATGCGTTTTCGATTGGGAAGTCTGTTATTGATGAAAAAGGGCCTTGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020267578.1	6.5e-202	brassinosteroid LRR receptor kinase BRL1-like
Swissprot	Q69JN6.1	3.1e-188	BRI1-like receptor kinase 1
trEMBL	A0A5P1ER22	4.7e-202	non-specific serine/threonine protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G55610.1	54.97	0.0	1105	BRL1	BRI1 like

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	bit score
g33154	AT1G55610.2	1046	353	11	5	944	127	1160	54.97	1105
g33154	AT1G55610.1	1046	353	11	5	944	127	1160	54.97	1105
g33154	AT3G13380.1	1042	364	9	5	944	126	1158	54.41	1091

Ortholog group

Species	Genes
Allium cepa	g33154.t1; g69389.t1
Allium fistulosum	AfisC5G05506
Allium sativum	Asa1G00720.1
Arabidopsis thaliana	AT1G55610.1; AT1G55610.2; AT3G13380.1
Oryza sativa	LOC_Os08g25380.1; LOC_Os09g12240.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF13855.3	LRR_8	Repeat	30	92	27.5	1.8e-06
PF13855.3	LRR_8	Repeat	482	540	32.8	3.7e-08
PF00069.22	Pkinase	Domain	652	916	154.8	2.4e-45

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0016020	C	membrane
GO:0005623	C	cell
GO:0044464	C	cell part
GO:0071944	C	cell periphery

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network