Detail information of g332752


Location
GeneChrStartEndStrand
g332752Scaffold_68579:HRSCAF_451665135215140357+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPON61276.12.6e-32TCP transcription factor
SwissprotQ9LSD5.18.1e-31Transcription factor TCP20
trEMBLA0A2P5CJV21.9e-32TCP transcription factor

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G27010.141.634e-35 145AT-TCP20;ATTCP20;PCF1;TCP20TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag332752.t1
Allium fistulosumAfisC4G02343
Allium sativumAsa4G01813.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF03634.10TCPFamily128235106.12.3e-30

Gene Ontology
AccessionOntologyName
---

KEGG pathway
KONameEnzyme IDPathwayPathway ID
-----

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.