Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g332918 | Scaffold_68609:HRSCAF_451695 | 17942 | 25332 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020256822.1 | 6.5e-208 | homeobox-leucine zipper protein ROC8-like isoform X1 |
Swissprot | Q69T58.2 | 4.5e-169 | Protein RICE OUTERMOST CELL-SPECIFIC 8 |
trEMBL | A0A5P1FA69 | 4.7e-208 | Homeobox-leucine zipper protein HDG11-like |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G73360.1 | 49.91 | 3e-162 | 568 | AtEDT1;ATHDG11;EDT1;HDG11 | homeodomain GLABROUS 11 |
Species | Genes |
---|---|
Allium cepa | g332918.t1; g54287.t1 |
Allium fistulosum | AfisC5G03528; AfisC8G00734 |
Allium sativum | Asa4G03803.1 |
Arabidopsis thaliana | AT1G17920.1; AT1G73360.1 |
Oryza sativa | LOC_Os06g10600.1 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00046.26 | Homeobox | Domain | 13 | 68 | 64.0 | 7.1e-18 |
PF01852.16 | START | Domain | 217 | 438 | 154.4 | 2.4e-45 |
Accession | Ontology | Name |
---|---|---|
GO:0000003 | P | reproduction |
GO:0005622 | C | intracellular |
GO:0005575 | C | cellular_component |
GO:0000902 | P | cell morphogenesis |
GO:0000904 | P | cell morphogenesis involved in differentiation |
GO:0000976 | F | transcription regulatory region sequence-specific DNA binding |
GO:0001067 | F | regulatory region nucleic acid binding |
GO:0003006 | P | developmental process involved in reproduction |
GO:0003674 | F | molecular_function |
GO:0003676 | F | nucleic acid binding |
GO:0003677 | F | DNA binding |
GO:0003690 | F | double-stranded DNA binding |
GO:0003700 | F | transcription factor activity, sequence-specific DNA binding |
GO:0005488 | F | binding |
GO:0005623 | C | cell |
GO:0005634 | C | nucleus |
GO:0043231 | C | intracellular membrane-bounded organelle |
GO:0006355 | P | regulation of transcription, DNA-templated |
GO:0007275 | P | multicellular organism development |
GO:0009653 | P | anatomical structure morphogenesis |
GO:0009888 | P | tissue development |
GO:0008150 | P | biological_process |
GO:0009664 | P | plant-type cell wall organization |
GO:0009791 | P | post-embryonic development |
GO:0009827 | P | plant-type cell wall modification |
GO:0009828 | P | plant-type cell wall loosening |
GO:0009889 | P | regulation of biosynthetic process |
GO:0009908 | P | flower development |
GO:0009987 | P | cellular process |
GO:0010026 | P | trichome differentiation |
GO:0010090 | P | trichome morphogenesis |
GO:0010091 | P | trichome branching |
GO:0010468 | P | regulation of gene expression |
GO:0010556 | P | regulation of macromolecule biosynthetic process |
GO:0044212 | F | transcription regulatory region DNA binding |
GO:0016043 | P | cellular component organization |
GO:0019219 | P | regulation of nucleobase-containing compound metabolic process |
GO:0019222 | P | regulation of metabolic process |
GO:0022414 | P | reproductive process |
GO:0030154 | P | cell differentiation |
GO:0031323 | P | regulation of cellular metabolic process |
GO:0031326 | P | regulation of cellular biosynthetic process |
GO:0032501 | P | multicellular organismal process |
GO:0032502 | P | developmental process |
GO:0032989 | P | cellular component morphogenesis |
GO:0042545 | P | cell wall modification |
GO:0043226 | C | organelle |
GO:0043227 | C | membrane-bounded organelle |
GO:0043229 | C | intracellular organelle |
GO:0043565 | F | sequence-specific DNA binding |
GO:0044424 | C | intracellular part |
GO:0044464 | C | cell part |
GO:0045229 | P | external encapsulating structure organization |
GO:0045595 | P | regulation of cell differentiation |
GO:0045596 | P | negative regulation of cell differentiation |
GO:0048367 | P | shoot system development |
GO:0048437 | P | floral organ development |
GO:0048468 | P | cell development |
GO:0048497 | P | maintenance of floral organ identity |
GO:0048519 | P | negative regulation of biological process |
GO:0048523 | P | negative regulation of cellular process |
GO:0048608 | P | reproductive structure development |
GO:0048731 | P | system development |
GO:0048856 | P | anatomical structure development |
GO:0048869 | P | cellular developmental process |
GO:0050789 | P | regulation of biological process |
GO:0050793 | P | regulation of developmental process |
GO:0050794 | P | regulation of cellular process |
GO:0051093 | P | negative regulation of developmental process |
GO:0051171 | P | regulation of nitrogen compound metabolic process |
GO:0051252 | P | regulation of RNA metabolic process |
GO:0060255 | P | regulation of macromolecule metabolic process |
GO:0061458 | P | reproductive system development |
GO:0065007 | P | biological regulation |
GO:0071554 | P | cell wall organization or biogenesis |
GO:0071555 | P | cell wall organization |
GO:0071669 | P | plant-type cell wall organization or biogenesis |
GO:0071840 | P | cellular component organization or biogenesis |
GO:0080090 | P | regulation of primary metabolic process |
GO:0090558 | P | plant epidermis development |
GO:0090567 | P | reproductive shoot system development |
GO:0090626 | P | plant epidermis morphogenesis |
GO:0097159 | F | organic cyclic compound binding |
GO:0099402 | P | plant organ development |
GO:1901363 | F | heterocyclic compound binding |
GO:1903506 | P | regulation of nucleic acid-templated transcription |
GO:1990837 | F | sequence-specific double-stranded DNA binding |
GO:2000112 | P | regulation of cellular macromolecule biosynthetic process |
GO:2001141 | P | regulation of RNA biosynthetic process |
GO:0090700 | ||
GO:0140110 |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
K09338 | HD-ZIP; homeobox-leucine zipper protein | EC:- | - | - |