result

Gene information

Detail information of g333040

Location

Gene	Chr	Start	End	Strand
g333040	Scaffold_68631:HRSCAF_451717	30660	33391	+

Sequences

CDS

Protein

Gene

>g333040.t1
ATGACGGTCGAGAAAGAAAACAAAGCTGAAGAAGAAATCAACAGTTGTGTGTTAGTCGGAATTCAAATTGATGAAAATGGAAAGGAGTTACTAAATTATGCTCTGAATAATGCAATTGAAGAAGGAGATAGAGTTGTTGCTCTTTATATTTCGCGCAGTTCAGGTAATTTAATCTCCACAAAATTTACGTTTTTCTTACTATAATCATGATCATTTTTTGATTTCCTATTGCTGAATCTACTTTCAGATCTTGGTACGAGCACTCAAACCTCGATTAAAGCACTAAACAACTTTTTAGTAGAGTTTGAAGAACTCTGTAGGTCGAAAAAGGTTAGCATTTGTGTACTTTCTTCCTTCCTCAAATTATACGATTTGTTGTTTAATCCCTATGATTTTAATGGAGTTTAGGTTACTCTTACCGGTCGCGTTGCTCGAGGAATTTCTATAAGAAGAACAATAGTTAAAGAGGCAGCACAATGTAACGCAAAAAAGGTTATTGTAGGAAGAAACACAAATATTGCTCTTGGGTAATTCATTTATTTACCTTCTTAATGATTATTTTACCTAAGAACTATCAGAAAATATTCCAGTAATTTCTGTGAGTTATATTGACATCCTTTCAGATGCTCTGCATCAGTGGCCAAATATTGTTTGAAAAAATTACCCCCTACGACTACTTTAATTGCCTTCCACAATGGAGAAGTTTTTCTTCAGAGATTGTCCCAAAAGCCTTCTCATCAAGGTATGTTCTTTTATTATTATTACTATTATTTTGTTTCTCTTTTTTTTTTCTTTTTTTTTGTTTGAACCTGAAAATTCGAAATTTCTCCTACTTTTGATCTCTTATTTTTGAGTTTGACTATTACATATGAATCTGTTACTGATATTGCCAAAGAATATGTTTTTAATTAATTTTTGATTGTTGCAAAATAGCCGAAACTCCAAAGCAGAATCTTGGAAGTATACTGCATCCCAACATTGGCTTATCCGCCGAAGACAACGATGAATATGAAAATGATAGGTGTCTTATTGTAGTAAGAAAACAACCTGAAATAAAACCTGGTTGGCCATTACTAAGGAAAGCAATAAATGCAAACATGGAAACGTCAAAAGAAACCGAAGCTCGTAAAATGTCAGTGGTTCAATGGGTCATGAATTTACCTGATCGATCATCATTGTCTGTTAAATCCCCCACTTCAGATTTAATTAACGAGTTGGAAACCATTCTCAGTAAAAATTCCTCCACTTGCAAATGGTTTCAGTATGAGGAGTTACAGCTTGCTACCAACTATTTTTCAAAAGGTCCCTTTCCACCAATCTCAATTTTGACATGTTTCTTTAAATCTTTTGTTGTTATAATTGTTTTTGTGATATTTTGAACAGATTATTTGATTGGAGAAGGCGGTAGTAGTCGAGTTTACAAAGGATGTCTTGCTAATGGAGAGAAAATAGCTATCAAGCTATCGAAGTTATCGAATGAAACATCCAAAGATTTTCTTTTGGAAGCTGATATAATTACTAAATTGCAACATGAACGTATTGTTCCTTTGTTGGGAATTTGTGTTGAATGCAATACGTTTCTTTCGATCTATGGTTATTTCTCCAAAGGAAGTTTAGAAGAAAATATACATGGTAAGATTTAAATATATCTGTTTCATTATCACAAATATCTTAAAATTTCAAGGGTAAATATATTTGTTTACTTTGGAAAAATTACAGGAAATAAAGTAAAAACTCCATTAGCCTGGGATAAAAGATTTAAAATAGCAGTTGGTGTAGCCGAAGCATTGAATTATTTGCATACAGGTTCATCTGAATCAGTTGTGCATAGAGATGTTAAATCTTCAAATATTCTTCTTAATGACAAATTTGAACCCCAGGTAGAAATACATTCAATTCAATTACCGGTTTTGATTTTGAAATTACCTCATATGTATTAAACGAGGAACATTACATGTGTGTAGTTGTCTGATTTTGGACTAGCAGTATGGGCACCAAAGAATCCATCGTCTCAGACTCAAAGTGACATTGTAGGAACATTTGGGTATGTCATTTTGTTAATTTTATCTCTATATTAGTATCGGTTGCTATTTAATTGACAATGTACGTTTGAATTTCGGTAGATATCTTGCGCCTGAATATTTCATGTATGGTAAAGTTAGCAGTAAGATCGACGTCTATGCATATGGTGTTGTTTTGCTTGAATTATTGACTGGTAGAAAACCAATTTCTGATGACAGTCCTAAAGGCCAAGAGAGCTTAGTTATGTGGGTAAGATATATATATTTCTTGGTATTTTAAGTCTGAATAGCTTTAATTTTGTGCATGTTGTTAATGTTATATAGGCCATACCAAGACTAGAAAAAGGAGATCTGAGCGAGTTTTTGGATCCAAACATTAATGGAAATTTTGAAGAGAAGCAAGTAAGAAGAATGATAAAGGTTTCATCCCTATGCATTACACGCACAGCACGACTTAGGCCACAAATGAGTCAGGTTCTCAGCCTTCTGAAAGGGGAAGAGGAGGTTCAGACATGGCTAAACTCCAAATCGATCATGGAATGCCAAGATGAAGAAGCATATCCTAGTTCAAGCATCGGATCGCATTTGGAATTGGCTTTGCTTGATGTCGAAGAAGATGATGCTTCTGAAATTAGCTTCGAACAGAACCAACTTAACTCTTTGGATGATTACTTGAGAGAAAGATGGAGCAGATCTTCCAGTTTCGATTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020262919.1	5.2e-240	receptor-like cytosolic serine/threonine-protein kinase RBK1
Swissprot	Q5XF57.1	4.4e-66	Probable receptor-like serine/threonine-protein kinase At5g57670
trEMBL	A0A5P1E346	1.3e-221	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G16750.1	42.86	3e-129	459		Protein kinase protein with adenine nucleotide alpha hydrolases-like domain

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g333040	AT2G16750.1	609	289	13	17	597	14	591	42.86	3e-129	459
g333040	AT5G63940.1	691	343	13	14	625	19	703	38.06	1e-125	447
g333040	AT1G77280.1	470	190	8	194	625	331	794	50.21	4e-122	435

Ortholog group

Species	Genes
Allium cepa	g333040.t1
Allium fistulosum	AfisC5G05163
Allium sativum	Asa4G04995.1; Asa5G02247.1; Asa6G03179.1; Asa6G05218.1; Asa7G00717.1; Asa7G07608.1; Asa8G02074.1
Arabidopsis thaliana	AT2G16750.1; AT4G35030.1; AT4G35030.2; AT4G35030.3
Oryza sativa	LOC_Os03g13820.1; LOC_Os03g13820.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00582.23	Usp	Domain	17	136	22.9	9.1e-05
PF00069.22	Pkinase	Domain	284	549	146.5	8.4e-43

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network