Detail information of g334139


Location
GeneChrStartEndStrand
g334139Scaffold_68778:HRSCAF_4518647040575758-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020263225.12.0e-108LOW QUALITY PROTEIN: putative kinase-like protein TMKL1
SwissprotP33543.11.3e-48Putative kinase-like protein TMKL1
trEMBLA0A6I9R3631.0e-98putative kinase-like protein TMKL1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT5G07620.150.174e-82 302Protein kinase superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag334139.t1
Allium fistulosumAfisC5G06413
Allium sativumAsa4G05078.1; Asa4G05081.1
Arabidopsis thalianaAT5G07620.1; AT5G61570.1; AT5G61570.2
Oryza sativaLOC_Os02g43870.1; LOC_Os04g46320.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF07714.14Pkinase_TyrDomain32158091.16.3e-26

Gene Ontology
AccessionOntologyName
GO:0005886Cplasma membrane
GO:0005575Ccellular_component
GO:0016020Cmembrane
GO:0005623Ccell
GO:0005911Ccell-cell junction
GO:0009506Cplasmodesma
GO:0030054Ccell junction
GO:0044464Ccell part
GO:0055044Csymplast
GO:0071944Ccell periphery

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K04733IRAK4; interleukin-1 receptor-associated kinase 4EC:2.7.11.1 MAPK signaling pathwayko04010
NF-kappa B signaling pathwayko04064
Toll-like receptor signaling pathwayko04620
Toll and Imd signaling pathwayko04624
NOD-like receptor signaling pathwayko04621
Neurotrophin signaling pathwayko04722

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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