result

Gene information

Detail information of g334264

Location

Gene	Chr	Start	End	Strand
g334264	Scaffold_68798:HRSCAF_451884	171536	178017	-

Sequences

CDS

>g334264.t1
ATGAAAGGGATTATAAGCACAATTTTGAATTCCTATAGCGACAGTGAGTATCAAAAGCCAAGTTATGGTAATGAAGAAGAAAGTGGGAGATATAAAAAGAGTGAAGATCATGAGTATGGTGGTAGAATAAATAATTTTGAGAGGCTAAGCTATGGAGGTGTGGATGATACAAATGACAGGTATAAGAGGACTGAAAAGTATGGTTACGGTAGTGGAAGGACTAACTATGAAAAGCCCAGTTACGGAGGTGGAGAAGACGAAGAGAGGAGAAGGTATAAGAAAAGTGAGGAGCACGACTACGGTGGTGGTAGCAGCAACTATGAGAGGCCTAGTTATGGAGGTAAAGATGACGAGGATGAAGGGTATAAGAAGCCAAGTCGCTATGGTGAAGATGAAGGATATGGACGCAAAACATATGTGAAAGAGTTGGGTTCGCGACGTCGTTCAGGTAATTTCGTTTGTTTTGGGTCAAAAGAGAGGGGTGTAGGAACTTCGACGTTGACACCTGGTTTGAGATCGTCGATCAACCTTGAGACGACGATGGAGGCGTCGATGCCTACAAGATCTGCTTCTCCCAGTAGGCTAAAGTTAGGGTTTCGACTGCCATCTTTGATCGAAAGAGGTCGAAATATTGGCGATGCTGAAGTGGATTGGTGTCGGTCGTCTAACCGAGCGGCAAAGTATCCAAAAGACGGCGAGAAGCAAATTCTTGCCATACAAAGTGGTTTAACATGGAGTCAGGTATCTAACTGGTTCATAAATGCTCGTGTTCGCCTATGGAAGCCTATGATAGAAGAAATGTATGCAAAAATTCATAAAAGAAATCAAGAAGAAGAAGGAACTGCTGAGGAGAAGGAAGGGGATACATGGTACAGAGCGGAGAGAACAGAGGGCAAGTTCTGGAGACAGTTTAGGATGCCTGCAACTGCGAATTTGGATGCGATAAAAGCACATTTGGAGAACGGGGTGTCGAAATTGTTGCAGTGGTGGAAGAATGCAGCAGGCATTGAAGGTGACAGCGTAGAAGAGGAGCAGGCAGTGGTTGTTTGGATGGAACAGCTCAACTTCAGGTAG

Protein

Gene

>g334264.t1
ATGAAAGGGATTATAAGCACAATTTTGAATTCCTATAGTATTATATATTCATTTAATATGCTACTTCTAGCTTTTGCTCTTGCTCAGAATGTGGAGATTTTTTGTCAAATTTTGTGTCATTGTCGTATTTAAATAGGATTTTCCATGTGTGTGTCTCTGTGTGTGGGGGAATTTAACTTGGTATGTTACACCTCCAAACTACTGTTAAGTATTAATCGTGTCATTTTACTAACATGGCAGTCCAACCAATTAATGAGCTGCAACTTATAAGCTGGAGCTAAAAGCCGCATATAAACAACTGACCATCTACACATAACTGAACGCATTTGATATTTTGTACTTTCATGTGAATCAGTTTCATATAGTAGTAATCATAACTATTTCATTGTATTCTGGTTGGCACTTCATATGCTTATAGTTTGAAGTGTTGGAAAGCTATTCTTAGCCTGATTAAATTTGTATATCAAAAGCTCATCAATTTATTACTTCTCCATGGATTTTTTATGGTTAGTTAATAACTACATAATATATAGCAGCCAAGTTCCATATTCACTAAATAACGGTGATGATAAAAAATAAAATAAAATAAAAACATAGTTTAATGAGATATCTACTATGGGGTCATTAACATGCAATTGTATTTGCAGGCGACAGTGAGTATCAAAAGCCAAGTTATGGTAATGAAGAAGAAAGTGGGAGATATAAAAAGAGTGAAGATCATGAGTATGGTGGTAGAATAAATAATTTTGAGAGGCTAAGCTATGGAGGTGTGGATGATACAAATGACAGGTATAAGAGGACTGAAAAGTATGGTTACGGTAGTGGAAGGACTAACTATGAAAAGCCCAGTTACGGAGGTGGAGAAGACGAAGAGAGGAGAAGGTATAAGAAAAGTGAGGAGCACGACTACGGTGGTGGTAGCAGCAACTATGAGAGGCCTAGTTATGGAGGTAAAGATGACGAGGATGAAGGGTATAAGAAGCCAAGTCGCTATGGTGAAGATGAAGGATATGGACGCAAAACATATGTCAGATATATCTTTTACATTGATTTTTTTTAAACCAGAACTGTTTCTTACAAAGTCTAAATTTGTTATGGTTTTGTTTACTTGGTTCTACATGATTGCATTTCAACACCAGTATGAACTCAGACAGAAAAAAAGCAAATGTATAATATAAGTATAACTGAAATAAATGAGACTAGCTTGAATCCAATTATTTAACCACGTGGTTTAATTGCAGAAATATAGGAACTTTGATTAGAATGTTTATATTTGAAGATAATGTCACCAACTTAGTTTTCTGTTGTATGATGTATCATTGTTTAGTGTTTTCTCATTATAAATAATAACTCGCAGCCCATAAAACAATTATTTGGCTCATTTTATAAAATGAATCATTGAAGATATGTTTGCTCAAATCAAATCAAGGCTTCCTTGAGCACTTAAATTTTTTCTTTGCATCCTACCTGATTAATTATTTTATAAACATCATAGAACGCTATATTTTCGAATCATTTCCCCACTTCAGTTTTGTTTATGATATCGATTTTTATCAGTATTTTGCTATTAGGTGGGAAATTGTTCATGAACTTCAATTGGCACGGTTATAATTCACTATCCCATGATTAATTATTGAACCATGAAATATAATTATGTTATTAAGAAAATTTATGCTTTAATAAGTCATGACTAAGTTATAATGGTATTAGTAAGAATAATAAGAGACCTGGCTAGTATGGTAAATTTGGCTTGTTTCGGGTTCAAAATTAAACGATTAAAGAAAAAATTGGAGTATTCTTGTAAACATTATTGTATATATATGGTTTGCTGCATTGCTTCTTTTCTTCATCAAAGCTTGATATGACTGCGGATTATAGCTTGGCATTTAATAATTTTGCAAAAGCTCTGTACTATGCTTTGCTACCCACGCTATTAACAATACTTACAGATTTATAGTGCACTACTACAAAACAGGCCATTTGCATCGCCTCATTTGAATCGGTTGAAGTTAAAACTGATGCAAATAGAACTATTTGCATCAGTTCCGTCTTAATAACCGATGTAATTGGTACGTAGAAAGAAATAGGTAATAAAAAATCAAATTTGCATCAGTTGTCACCAACAACCGATGCAAATACGTCGATGCAAATAGTTGTAGTTGCATCGGTTTTAAAGTCAACCGATGCAACTAAATTAATTTGCATCCCTTTCGTTACGCACTTTCGTTAATTCCCGCCATCCTAATTTTTTCTGCCGCCGGTTATTTTCCCATTCGTTTCTAGTATTTCTGCTGCTTCCAAAAAAGACCCTAGACCTTAACCAAAATCCATGATTTAATCAACGAATTCCTCTCCCATTTTCTCCTTCACCTTCTTCTCCTCTCTCTCATTTCAAACCCTAATTTCCTCTAATTAATGCTCGAGAGTCTGGATTAAAGGTGAAAGAGTTGGGTTCGCGACGTCGTTCAGGTAATTTCGTTTGTTTTGGGTCAAAAGAGAGGGGTGTAGGAACTTCGACGTTGACACCTGGTTTGAGATCGTCGATCAACCTTGAGACGACGATGGAGGCGTCGATGCCTACAAGATCTGCTTCTCCCAGTAGGCTAAAGTTAGGGTTTCGACTGCCATCTTTGATCGAAAGAGGTCGAAATATTGGCGATGCTGAAGTGGATTGGTGTCGGTCGTCTAACCGAGCGGCAAAGTATGTTGATTTCTCATTTTATATTTACAATTAGATTAATTATATTCTAAAGCTAGTCATCCTGCTGACAACGTTGACTTAATTCATTTATATGCTTCATAACCTCCCAGGAGTGTTTGATGCTTTTGCCAGTTCACATCAAAATTCAATACTCTGCCTTCCAACAAGCTTCAGAGCATTATACTGAGTGAAGAGGTTACTATTCCTGAGCATAATTATATGACTATTTTTTGAAGCATTTTGAAATGTAAGTCTCTAAACGTGCTTAGTTTGTATGACTATACCGCCAAACAGGTGCCATTACTTGTTGGGTTTAAATGGTGCATGTTAGAATATAGTTCAACACAAGTGAGCTTATGCTTATCTGGATATATGATGTCATTCTACATGTTTTTGATTTCATAGTTATCAAAAAAACTATTTCTTTAACATAGTCTAGAGTAATCAAGATATTATATCCACAAAAATAGTTTAATATATATTGTACTCTAGAGAAGTTTTGGATAGTCACCACGCATAATAGGATAGAGAAACCTATAAGAGAAATTAATGTGATATGATAATTTAGCATTACATTTAGTTACATGTAATGTATAGTTGAAGATCATTCAGTATTACCATCCTATAGTGAAGTTTCTTGCTCTTTTATCAAGTTCTTGAAAAGCAAGGATCCAAATAATGGAAGCAAGTAGGCTTCGCTTGCGGAACTGCAAGCTTTGGATGATCATCTCATGGCTCATGTATTTATATTGTGCTTTGCTCATACTATTGAACAACTCATGACTAGCCTTTTCTACTTCATTACCATATTTGTGAAACACTGATTTTTTTCTAATTCTATTAGGGGCCATTTGTTAATGGTGAGAACATATCTGCAGTTGACTGAAAATTATCGCTAAATTGCTTCTTTCCATATTTAGTAAATTATCTCTAAATTACCAGTAGTGCATGTATTTTCAAATGAAGTTACTTAGAAGTTATAATGGATGCTTCAAATTAATTTCTTAGTAGACCTTTCTGATCTTGTCACTTGTATGAGTTTTACCTTGTGAATTATTGCATTTAGACATTCTAATTATTTTGTATCATATATCAACTTTTAGCAGTATGCTATCTTATAACAGTTGTTTGCAATGCCTGAAATAGAATTAGGCTTACCTACATAATATATATATATATGTGCTTCATATTTTCTATCAAGGATCCCTGGACATTAAGGTATACATGATATACTGTCATCAGCACATTATCATGTTTATATCCTGACTAATTACAACATTCATCTTCAGTCACGAGCATGTACAAATTATTGTTTATGTGCAAAATACATTTATAATGAATAGAGAATAGTATGTTGATTTAACTAATCAAAGACTGAATGGCTTCGAAATGCTTGCTTGTGGCCGTGCAACTCACTTTGTTACTTCAGAGGTATATACACTTATTATATAACTGTTCTGAAGTTATATAAATTTATCATAGGCCGTGTTAATTCATAGAAATTGGATATGTTGGAGGAATCTCTCGTTGGAAAAAACACTTCTGATTCTTCTATTGTTCATGGAATTATCAATCGATTTTCTCATAAACTGCCTTTAGAGAAAATGGTGATATTAACATTTGAGCCACCAGTCTTTGACATGTTAAATTAGCTAGTGTTGATAGTTGCATTTCCACAATCTATGTATTAAAATTTAGGAATGAAATATGAGAACCATAAATGTTACATGCAATAAGTTCTAGTGTAAATGTGAGGTATCCAAAATGGATGGATAATGAATAATGAGATGTCTCAGAAAAATAGTAATGTGGTTGTGCTAACCTTTTAAATTTATTTTATAGGTTGACAGCCAATGCAACCAATATCTAAACCAAATACAGAGCATAATGTCTAAATACCAAGGAAAAACCAACCAAAGAATTCCTCAAATGAATGCTTGATTCACCACTCAGAAAATCTCCATCTTCTACAGATTTCTAAGAAATAGAATTGCTAGTCATATCTTATCAACCAATGAGCATTATGTTCAGAAATCTTCTATGGAAAAAGAAAGAAGCTTTGAAACATCATTTGTACAAAAACATTGGGCTCTTCAGCAGCTTAAGAGAAACGAGCATCAGTCCTGGAGACCCCAAAGAGGCTTGCCAGAAAAATCTATTTCTGTATTAAAGGCTTGGATGTTCCAGAATTTTCTGCATCCGTGAGTTCAACTAAAACTAAAATCCCAGTCGTTTCTTGAACACTCCGAAATTCCAGACTATTAACATAGGAAGTTATCACTGTTGATAAATCACAGTAGTTTTTAAAGGTTTTAGTTTTTAGCTGCAGTAGAAACACATAGCCAAACGTGTTTTTGTTAGTCTAATGCTGAATTTAGTGACCAACTGTAGAAAGTAACAGGTGTTTGGACTAATAAAGAATTTATTTATTTTTTTTCAATTCAGGTATCCAAAAGACGGCGAGAAGCAAATTCTTGCCATACAAAGTGGTTTAACATGGAGTCAGGTAGTCATTTTTGGAACTCCATTTATATACATTTTTCGCTTTTTTTTCCCGAACATACAAATAATATGTGTTATGTACTGCTCTTTTTATATGTTACACTTAGGTAATACTAATTTCTTAGATTGTGAATATGGGATAACATGGTATAGGTATCTAACTGGTTCATAAATGCTCGTGTTCGCCTATGGAAGCCTATGATAGAAGAAATGTATGCAAAAATTCATAAAAGAAATCAAGAAGAAGAAGGAACTGCTGGTTAAGGAAGAAATCTTGCATATACTGGAGGTTAGAAAACTCAAATGAACTAAAGCTTTCAGCCTCGTGGATCATTTTGTGAGCATTGTATCAGCTCTTGTTGTACATGAAGCAGTAGTGTGCAATAGTGCATAAGTTGCAGAGTTAGCAATTATCTTTTGTTTTACTTCATTAAGCATGCTTATATCGTTAACTCCAAATTTCAAGTACAGTAATACATTATCCGTTGAATAGTAGAATGGCATGTCTGCACTTATCAATCTATAACTGCTACAATATATCTTATACCAGGATTTGGCCATGGCATCCTCTCAAGTCTCAACTCTATTTACCGAAAACAACATTTCGGTTGGTGCATCTTTTCTTATTGATGCTTTTATAGAGTAAGCATTTAATTTCCATTTTTTTTCCTAAAACAGAGAGGGTGGACTGGAAGGAAATGCCTCAAGCTCATGTCATCATATTGGATGTGCCAAGTACATTACAAATTTGCATTCAAACCATATACATTTATATATAACTGTGTTTGCGCATGATCACAATATAACGGCTGTGATTTGTGAAATGATGGGAAACAGGGGTGGAAAATAAAGATATAAAGATAGAGGTGGAGGACAACAGAGTGCTGAGAATAAGCGGGGAGCGGAAGACATAAGAGGAGAAGGAAGGGGATACATGGTACAGAGCGGAGAGAACAGAGGGCAAGTTCTGGAGACAGTTTAGGATGCCTGCAACTGCGAATTTGGATGCGATAAAAGCACATTTGGAGAACGGGGTGTCGAAATTGTTGCAGTGGTATAAGTAGTGACAGGAAGTTATATGAGCAGTAACAGGGATTGGTGGAGCAGATGTTGCTGATTGAGGAGAGTTATATAAGTGGGGTTGTTGGAAATGTGACTATATGCTGAATGGAAAATTGTTGTTGCTGTCAGGTGGAAGAATGCAGCAGGCATTGAAGGTGACAGCGTAGAAGAGGAGCAGGCAGTGGTTGTTTGGATGGAACAGCTCAACTTCAGGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020249125.1	3.2e-16	homeobox protein ATH1-like
Swissprot	P48731.1	1.2e-15	Homeobox protein ATH1
trEMBL	A0A5P1FQV2	2.3e-16	Homeobox domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT4G32980.1	76.92	3e-18	89.4	ATH1	homeobox gene 1

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g334264	AT4G32980.1	52	12	0	223	274	394	445	76.92	3e-18	89.4
g334264	AT5G41410.1	51	16	0	228	278	418	468	68.63	2e-14	76.6
g334264	AT2G16400.1	104	48	2	196	296	277	372	43.27	6e-14	75.1

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF05920.8	Homeobox_KN	Family	228	258	37.8	1.2e-09
PF00011.18	HSP20	Family	270	323	34.9	1.2e-08

Gene Ontology

Accession	Ontology	Name
GO:0001067	F	regulatory region nucleic acid binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0005488	F	binding
GO:0006355	P	regulation of transcription, DNA-templated
GO:0008150	P	biological_process
GO:0009889	P	regulation of biosynthetic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0044212	F	transcription regulatory region DNA binding
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:1901363	F	heterocyclic compound binding
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network