result

Gene information

Detail information of g335984


Location
GeneChrStartEndStrand
g335984Scaffold_69001:HRSCAF_45208710053701014321+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_010247478.22.6e-142PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ6IVC2.26.1e-128bZIP transcription factor 8
trEMBLA0A1U7Z5A51.9e-142transcription factor TGA2.2-like isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G12250.173.093e-132 468BZIP45;TGA6TGACG motif-binding factor 6

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag168250.t1; g335984.t1; g60786.t1; g72979.t1
Allium fistulosumAfisC2G06918; AfisC5G01010; AfisC7G04286; AfisC8G05968
Allium sativumAsa1G00060.1; Asa3G01569.1; Asa4G02800.1
Arabidopsis thalianaAT1G68640.1; AT3G12250.1; AT3G12250.2; AT3G12250.3; AT3G12250.4; AT3G12250.5; AT5G06950.1; AT5G06950.2; AT5G06950.3; AT5G06950.4; AT5G06960.1; AT5G06960.2
Oryza sativaLOC_Os01g17260.1; LOC_Os01g17260.2; LOC_Os01g59350.1; LOC_Os03g20310.1; LOC_Os03g20310.2; LOC_Os03g20310.3; LOC_Os03g20310.4; LOC_Os05g41280.1; LOC_Os06g15480.1; LOC_Os06g15480.2; LOC_Os07g48820.1; LOC_Os07g48820.2

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00170.18bZIP_1Family14218030.62.4e-07
PF14144.3DOG1Family224299106.36e-31

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0002376Pimmune system process
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006952Pdefense response
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006355Pregulation of transcription, DNA-templated
GO:0006950Presponse to stress
GO:0006955Pimmune response
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0042802Fidentical protein binding
GO:0042493Presponse to drug
GO:0009605Presponse to external stimulus
GO:0009607Presponse to biotic stimulus
GO:0051707Presponse to other organism
GO:0009627Psystemic acquired resistance
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009751Presponse to salicylic acid
GO:0009814Pdefense response, incompatible interaction
GO:0009862Psystemic acquired resistance, salicylic acid mediated signaling pathway
GO:0009863Psalicylic acid mediated signaling pathway
GO:0009889Pregulation of biosynthetic process
GO:0009890Pnegative regulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009892Pnegative regulation of metabolic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010558Pnegative regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010605Pnegative regulation of macromolecule metabolic process
GO:0010628Ppositive regulation of gene expression
GO:0010629Pnegative regulation of gene expression
GO:0014070Presponse to organic cyclic compound
GO:0045935Ppositive regulation of nucleobase-containing compound metabolic process
GO:0045893Ppositive regulation of transcription, DNA-templated
GO:0045892Pnegative regulation of transcription, DNA-templated
GO:0046677Presponse to antibiotic
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0031323Pregulation of cellular metabolic process
GO:0031324Pnegative regulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031327Pnegative regulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0032870Pcellular response to hormone stimulus
GO:0035690Pcellular response to drug
GO:0042221Presponse to chemical
GO:0043207Presponse to external biotic stimulus
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043565Fsequence-specific DNA binding
GO:0044424Cintracellular part
GO:0044464Ccell part
GO:0045087Pinnate immune response
GO:0045934Pnegative regulation of nucleobase-containing compound metabolic process
GO:0048518Ppositive regulation of biological process
GO:0048519Pnegative regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048523Pnegative regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051172Pnegative regulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0051253Pnegative regulation of RNA metabolic process
GO:0051254Ppositive regulation of RNA metabolic process
GO:0051704Pmulti-organism process
GO:0051716Pcellular response to stimulus
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0071229Pcellular response to acid chemical
GO:0071236Pcellular response to antibiotic
GO:0071310Pcellular response to organic substance
GO:0071407Pcellular response to organic cyclic compound
GO:0071446Pcellular response to salicylic acid stimulus
GO:0071495Pcellular response to endogenous stimulus
GO:0080090Pregulation of primary metabolic process
GO:0097159Forganic cyclic compound binding
GO:0098542Pdefense response to other organism
GO:1901363Fheterocyclic compound binding
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:1902679Pnegative regulation of RNA biosynthetic process
GO:1902680Ppositive regulation of RNA biosynthetic process
GO:1903506Pregulation of nucleic acid-templated transcription
GO:1903507Pnegative regulation of nucleic acid-templated transcription
GO:1903508Ppositive regulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2000113Pnegative regulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K14431TGA; transcription factor TGAEC:- Plant hormone signal transductionko04075

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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