Detail information of g342402


Location
GeneChrStartEndStrand
g342402Scaffold_69742:HRSCAF_452828153218162877-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020267653.12.9e-240protein DA1-related 2
SwissprotQ0WSN2.15.6e-180Protein LATERAL ROOT DEVELOPMENT 3
trEMBLA0A1D1Z8H02.3e-218Protein DA1-related 2 (Fragment)

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G39830.160.982e-176 616DAR2;LRD3DA1-related protein 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag206664.t1; g331720.t1; g342402.t1; g363944.t1
Allium fistulosumAfisC2G05310; AfisC3G01668; AfisC3G03286
Allium sativumAsa0G03349.1; Asa2G00720.1; Asa2G02641.1
Arabidopsis thalianaAT2G39830.1; AT4G36860.1
Oryza sativaLOC_Os03g16090.1; LOC_Os03g16090.2; LOC_Os03g42820.1; LOC_Os03g42820.2; LOC_Os03g42820.3; LOC_Os03g42820.4; LOC_Os06g08400.1; LOC_Os06g08400.2; LOC_Os12g40490.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00412.19LIMDomain23128535.01.1e-08
PF12315.5DUF3633Family380592322.48.1e-97

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003674Fmolecular_function
GO:0005488Fbinding
GO:0007275Pmulticellular organism development
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0010087Pphloem or xylem histogenesis
GO:0010088Pphloem development
GO:0022622Proot system development
GO:0032182Fubiquitin-like protein binding
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0043130Fubiquitin binding
GO:0048364Proot development
GO:0048731Psystem development
GO:0048856Panatomical structure development
GO:0099402Pplant organ development

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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