result

Gene information

Detail information of g344867

Location

Gene	Chr	Start	End	Strand
g344867	CHR8	79401491	79408691	-

Sequences

CDS

Protein

Gene

>g344867.t1
ATGGGCTGCATTTGCTCTAAAGGAATTGATTCAGATGAGCAGAATGCGTCCGAAAGAGTAAAGTCACGTAGATATTCAAAAAGGTTTGTTATTTCGTCTAAAAAGGATGAAATTTTGGTACCTGATAGCAATGGTTGTTCTAGTAGTTATGTAGGGAGGGAGAGGCTTATATCTGATGATTTAGAAGATAATACTACAAATCCAATTCCGAGATTATTGAATGAGGTTGACAAGAAAGTAGAGGAGGTTGCTAATAGAGCGCATAGAAGAAATATTACTGAACCGCAGAGTTCTGGTCTAATTATTGAAGATAATCATGATTTGAGAATACCCAATGGGCCTAATGGATTTAGGAGGGAACGTGAGGTGGCGGGTTGGCCTCCGTGGCTTATGGCTGTGGCCAAAGAAGCAGTTGAAGGATGGCTTCCTAGAAGAGAAGATTCTTTTCAGAGATTGAACAAGGTAAATTCTTCTTTTTATATATAGAAAAAGGTAAATTCTTAAACATGGTTTCATGATTTTTCACTAAAAAGTAGTTGCTCTTGTAATAAAATTCTTTGAGCAAAACCGTGATGGATAGCCAGAGATAGGATGAATTTATTTTTTCTACATATTTTGGGCATAATTTTCCTTATAAGGATCAAAAACGTGTGCTATGTAAAAAATATAAACATGTATTGTTATCTTATTTTGGAGTTTTCCCCACAGACTTTGGGCTGTAGAAACGGACTATAGCTGAATTTATTTAGATTTGGAACATGAGATCTTATTCTTTTATCATGGATGTTACTTGATAATCTCCCTTGTCCCACAACACAAATATAAATAGTAACTTTCTCGCATCAAATAGCAATCATTAACCGGTAATATTTATGGACCGACTAAAATTGGTACTATGGACTTTAATTATGCAATCATGAATCGTATGCACATTCGACATTATACGTGTGTAAACCACTTACTGAGTATCTTAGAAACATAAGAGCATCAGATGCACATACGGCAGCGTCCACATAACTCATCAGGCAGTACCGTGGACAAAGTAGATGTAACCAAATACATGTGCATTTATCTTTGTGTCTAGCATTCAGGTGGGTATTATAGTGGACATTTATCTGCATTATATGCAAAATTGTATATATGACTAGTATAATTATTCAACGTTCACTTGTTGATGAAGAAACACTCGTGTGTGTCATACTTTTGCTTATAAGCTGGGTTGTCTGCTTAATATATGATTCTGAATAGATATCAACTGAAAGCATGTTTAGTTATCTGAAAATGTTGTCATTTGGACTGACATATTGGAAAGGAAGTTCCAATATCAGTGTCCCAAGTGCGGTACCATAATGAAAACTAGGGCCATTCGTCAGTTTAAACCGGCTGTGGGCATTGTCCCTTGTACTCACCTCCTCACTGCAGTATTACAAGTCAAAGTCGATTGATTTATTTATTTAATCATCTAGTGGTTAGAAAACAATAGATTTCTGATAGAAGGTAAATGGGGGAGATAACAAATGCATATCACTGCGTATAAGCATAGAGCTACAAACAGTGATGAAACCAGGATTTTTGTGTGCGGTGGAAAGAATTATATAAATGATCAAGCATTTTATGTAATTTAAAACAAAGTATAAATTTCGACTATACACATCAAAATAACAATTTGAAGTAATTGCGTTGATATCAGCATATAAATCAATACAAACAACAGAAAACTATACTGGCAACAAAAAATTTAACACACAGCAGTCATCAGTGGGAAAAAAATCATTGAAAGTATCATCAAAAAAATGATACGCAACACGCATCGGCAACCAAAACATTCAATGCTTAGGGAATTCACCCAAAATAAATAGAAGTCATAAGTCGCAGCAAGATCTATAGTTTCTTAGCGATTGCAAGTTTCAATAACTGAAAAACCAGTGAATAATTTTAGGGCAACTATTTTTGAGCACTCGATTTAGCAATTTTAGATCAGTAAAGTAGTGGGCAAGTGCAAATTTGAAGCACGGTGGTATTCTATTGCGAGAATAGACAAAAAATCGATCAACTTTCAATTGTCAAATTGGCATACTTTTCTGATGTCATATTGAAAGATGAAAATTTGATAGGGTTTCATTTTGTTGGGTTCACATTCTTTATTGCTTTGTTTTCTTATGGTTTTTTGGGTTGGGCAACTGCCCACCCAACTCAACACATAGATTCGTCACTTGCTATATGTCTGAGGAGTAATACTTCAAAGCGAACAACTTTTTGATGAATATTTTGGTAGATGGTTAGCAAATCATGGACTTCGGCTTTCTTAAACTGAACTTTGCTGGTACTATGTAGTAGGAACAATGATTATGTGAATGCATATTCTCGACATTTTCTTATGAACTTATATGCCATCTATTAGAGTACCAGGAGGGATTATGGCTATACTAATCAAACTATTATCATCTGGAAAATGCTAATGTCCATTCATCAGTCACAGGTTAAGATATTACATTTATTTCATTTGCCCTTATTAAATACTGATACTTAATTCCACTAGAAAGGGAAATTTGGTATTTAAACATTAAAATACTTCGTCTTGTGTAATAAAACTTTGTTTTCCTGTGACATGTCCCGTGGATACATGTTAATAACACAACCCTGGCTGGTTGGAAAGTTAGCTATTATCTAGTGAATTAAAAAAGCACACCCGAGGCGTCCGTCAAGGCGAGGCGTAGTCTATAAAGTCTCCACGCACACTCCAGGTAGTGTTTAGCGGTGCACTCCTCAAGTGGTTGAGTTGTGTGCCTCAAAAACAAAAACTTTTGCCTCCTGTTCAAAGCTATCGGGTTATTCAAACCAGCATCTCAAAACAGGGAAAAGGAAATACAGAGCGTTAATCAAAATTTGAAATTGATTCCATCAGGAATTAATATCTGAAATCCTGGAATCAATTTCATAAATCGATTCCGCTGGAATCCATTATATAAATCAATTCCAGTTTTGGAATTGATTTAAACATACAACAGTTTTTTTTTTTGTCGGAAAAAATAATAAAATAGTGCTAATAAGAAAAACACAGATGAGAGGAAGAAATGAAAATGAAATTTAAATACCTAGGCAATGTTTGGCTTGAAAACAGGTTTTGTGTTTTCGATATGTATGTCAATTGACATAGGAAGAGGATGAGGAGTTGGAAAATCCTAGTCATTCCAACAAATGGAATGGGAGAATGTAGTTTTTGATATTTCACAAAAGCAAAAAATAAGTAAAAACAGATTTCAATTTTATATATGTTAAAATTATTTTCCAAATCGACCATTTTCCACCACCTTCTCATTATCAATGCATTTTAAAGTACACTTTGAAAATGCGATACACAATACTCGTTTTCAACCAAACGCTACCTTGACTTTTACTTGAGAGTTGAGAGATAAGATTACCTACTGCTAGTTGAGAGATAAACTGATACATTGATAATTGCTGCCGCTGCTAGTCAGGAGTTACCTGAGAATTGAAAATTACAGTGGATTATTTATACTTAGCTGCTACTAGTTAGTTGAGAAGTGTTAAATATTTTTTTTATTCTTGTACTATTTTTTTTATTACTTATACTATTACTCTTTGATAAACAACGCATTATTCTGTAGAAAAATTGTATTACTAACTACTCTTTAGATTGTTAATTGATTTTTTTTTTTCCTTTGGATTTTATATTACTTTGTGTTATGTACGTTTACTGTTCTATTTCTAATTCTTTAATATGTCATGTGTATAATGGTTACCAAAAAACTTACACTTCAATGCCTCGAGGTTTACGCCTTGCCTTACGAGCATAAAAATGCCTCATATGCGCCTTCATCTTTTAAAACATTGCTATCATCTCGTAAATGTTTTGCAAGGAAATCCTAACTTAGGAGTACGTAGATCTTAGCCTATAAGATTAGGATACCAGAAAATTGGACCAATTTAGTATAATTTTCCACATATTGTCTTCTTCAGTAATGTTTTTATTCCAAAAGCCATGAGCCATTCAAAACAACCTTACTTATAAATCTCCATAGTTCACAGATATTATACAAGGCAAACACTAGTTTCTAGCTGTGGTATGCATGCACATGAAGGTGTAATAGATATGCATTCTGGTATTATTGCGCCAGTATAATGGATATGCGTAAGAAAAACATGGAATAAGGTAACACATATGTTTCTACGGCACAGTGCACTGAATGATAATACACAACTTTAGATAGTACGACTTGAAATGATGCACCAAATGATGAACAATGAAAAAAAGATGTGTTTTTTTATATTTTTGGCTTTTTCTTCAATTTTTCCTCTTTCATTTTCATAATCCAAAAAGCGTATGAAAAATTGTATTTTTTATTGCATAATCATGTTTTTAAATTAACTTCAATTCTTTTTTGCACGTTGTAAAAAGCAGAAAATATGAACAAATTCTCTACAGTTGAAGACTAATGGATGTAGTTATGATCTGGAAAGACTAAACTGTTTTATGTAATATTCTCTACGAACACTTCATTATTCCATCATGTATATAGAGATCAGTTCATATCTTGTGATGGTTTAGAAAAACTAATTAGAGTATTTTTAGGAACTAGTTAGCATTTTTGCTTGGAAGAATTTATTTATATGAGACTTATGTATATGGTTGTTTTGAGTTGTTTACACGCTTATTTATACAATTATACAACATTTTTCTCTTTTAAATACATTTATATACGGACAAACTGGATTATGATTCAAAAAGTAGTTTTCAATGTATTCAAAATATTTCAAAAACTACAAAAAAAGGTAAAATAACACGACATAAATTATATAAATCTCTATATTAATTTGTACTATTTTTGGTAAATACACAGTATTTCAAATGAAGTGCGTGTCTTTCATGTCGTACACCAAGCCCCCAGAAAAATTGGCTTTGTGGCCCTTCGATCTCAAATTAGGAAGTAACCTTTCTTTTTACTTCTGTATTTTTTGAACTTTGGCAGTTGTCTTATTCTCCTATTTCGGTTGTCTTCTCATCTTAAATAATACTAATCATTTTTTTCCTCAATTGTTACCGATGATGCGTAATTTTATTTGATTCCTTTAAGCATGAAAATGACTCTTAGTATCCTACTCAACAATTCGATTCCCTGGTATGAATCATATTATTATTTGCTTCTTCTGCAGATTGGACAAGGAACTTATAGCAACGTTTACAAGGCTCGTGACCTTGAAACTGGAAAAATAGTTGCTCTAAAAAAAGTGAGATTTGTTAATATGGACCCTGAAAGTGTTCGTTTTATGGCAAGAGAAATATATATTCTTCGCAAACTGGATCATCCTAACATTGTGAAACTGGAAGGTCTAATTGCCTCAAAATTCTCAAATAGCCTGTATTTAGTTCTTGAATATATGGAGCACGATCTAGCTGGACTTGCTGCCACACCTGGTATCAAATTCAGTGAACCTCAGGTACTTGTTAAAGTCACTATTCATGTTTATTTTCCTCTAAATGTCATCTTCCACATCAGGTTAAATACGAACTAGTATGTATCATTCTATTGCTTGTAATGGATTTTGGTATGGATCTAAGAATAAGTTTTGTCATTACAAAGTATGTTAATGAATTGGATTCCAACAAAGAAAAGATCCTTATATAACTTTCAAATTAATGTGGCTTAAGATGATAATCTGACAACATGTTATAAACCTAATAAAGTTTCAATTTTAGTTACAAAATCAAATATTTTTTGGCATTTCATTTGAGTATTTTGTGAGTGGATTTTAGGTCAATATCATATGTGCAAAATTACGTAATTGTGTACATGAATCGCCAACAATGATACAAGCAGTACTTATTTTTTAATAATTCCTAATTTTTGGAAGTGTAATTCATTGCTTTGAGTCAATTCACTTCAAATTTGTATGTGCCTAACTTTCGATTAACATTAAAGATTTTATACAGCAATTTTCCTTTATGTGTTATATTCCATGCTTAATTCAGATTAAATGCTATATGCAACAACTACTCAGTGGACTTCAACATTGCCACAATCACGGGGTTTTGCATCGTGATATAAAAGGCTCGAATCTTCTAATTAACAACGATGGAATACTTAAAATTACTGATTTTGGATTGGCGACATTCTACAATCCAAATCATAAACAACCGTTGACTAGCCGAGTCGTGACACTGTGGTACAGACCACCTGAGCTTTTGATGGGAGCTACAGAATATAGTGTTTCTGTTGATTTGTGGAGCACTGGCTGTATCCTTGCAGAGTTGCTTGCTGGAAAGCCTATAATGCCTGGAAAAACTGAGGTTTGTTTATATGTTACGCGGTTGTACTCATATTCAAATTTGTTGAAATTCAAAACCTCCGAGCGTTTTAACTTTTATTTGCTGTATTAAACACATTTATTTGGAAATAGAAAATGGAGTATGTGTTGCATATTGGTACAGCCATCCTATTCTGTCTAGGCCGTTTAAATTTTTTACTAGTTGTTACAACTTAGTGGTGTACTCTTAATTATATGCATATCACAGGACTGCATGACAACTGTCCTTTTTTGTACCATTCATTTATCATACATGAGCAGTGTATGACATTTATGGGTGAGAAAAACTTAGAATTTACGCATCCTTTTTACTATTATTATTACTGATTCTAAGTTGTCTTTTGTGCTCAACTTTTGACATCAAAGGGAAGAAAGTGGTTGCACTGATCTTATTGGTATACAGATCATATGAATAAGATTCACTGTGGTTTTTCCACATGATACTATATGTACATAGAAATGAACTTAAACTGCAAATATATTGCGACATACTGTTTGACTAATCTTCTGAAAAATATATATCCAACTCTTCCTATTTTCTTTTGCATTCAATTTTATATAGGTGGAACAATTGCACAAAATATTTAAGCTTTGTGGCACACCAACCGAATCATATTGGGCAAAATATAAGTTACCTCATGCTACCATATTTAAGGTGCCTCTTCCTTGCCGTCTTAGAGATTCATTTAGAGATTTCCCTCCGACAACCGTTAAGTTAGTGGAGACATTGCTGGCAATAGATCCGGAGGATAGGGGGACAGCATCTTCTGCATTGAAAAGCGAGGTAAGTTCGTCTTCCATTTTTTTAGGACAAATTTTACAACAAGGCTTCATAAATAAACTTATTCCAAGTATAGGCATCAATGCAAAGTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020261976.1	1.6e-153	LOW QUALITY PROTEIN: probable serine/threonine-protein kinase At1g54610
Swissprot	F4I114.1	5.2e-133	Probable serine/threonine-protein kinase At1g09600
trEMBL	A0A8B9AWL5	8.8e-154	probable serine/threonine-protein kinase At1g54610

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G53050.1	57.37	5e-143	504		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g344867	AT1G53050.1	441	159	6	1	433	1	420	57.37	5e-143	504
g344867	AT1G09600.1	455	174	6	1	434	1	450	56.04	4e-136	481
g344867	AT1G54610.3	405	153	4	56	458	43	426	56.54	5e-136	481

Ortholog group

Species	Genes
Allium cepa	g344867.t1
Allium fistulosum	AfisC8G02738
Allium sativum	Asa1G02511.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	149	429	240.2	2.2e-71

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0051726	P	regulation of cell cycle
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004693	F	cyclin-dependent protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0097472	F	cyclin-dependent protein kinase activity
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K08819	CDK12_13; cyclin-dependent kinase 12/13	EC:2.7.11.22 2.7.11.23	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network