Detail information of g345987


Location
GeneChrStartEndStrand
g345987Scaffold_70157:HRSCAF_453243104032116995+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrPAN45440.15.6e-48hypothetical protein PAHAL_9G119300
SwissprotP56521.13.0e-14RPD3 homolog
trEMBLA0A804I6233.9e-51(wild Malaysian banana) hypothetical protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT4G38130.180.953e-1580.9ATHD1;ATHDA19;HD1;HDA1;HDA19;RPD3Ahistone deacetylase 1

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag345987.t1; g483498.t1
Allium fistulosumAfisC3G00893; AfisC6G03414
Allium sativumAsa2G06979.1; Asa6G03801.1
Arabidopsis thaliana
Oryza sativaLOC_Os03g50110.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF04504.11DUF573Family41350687.37.2e-25

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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