result

Gene information

Detail information of g348013


Location
GeneChrStartEndStrand
g348013Scaffold_70394:HRSCAF_453480132751142792-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020265084.15.0e-302histone-lysine N-methyltransferase ATX4-like isoform X3
SwissprotQ9SUE7.38.0e-228Trithorax-homolog protein 4
trEMBLA0A6I9QQ473.2e-258histone-lysine N-methyltransferase ATX4

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT4G27910.159.630.0 719ATX4;SDG16SET domain protein 16

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag348013.t1
Allium fistulosumAfisC6G04473
Allium sativumAsa8G02721.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00855.14PWWPDomain14023248.86.3e-13
PF13831.3PHD_2Family44047445.92.6e-12
PF13832.3zf-HC5HC2H_2Domain48159395.02.7e-27
PF00856.25SETFamily72583069.24.7e-19

Gene Ontology
AccessionOntologyName
GO:0005575Ccellular_component
GO:0005911Ccell-cell junction
GO:0008150Pbiological_process
GO:0009292Pgenetic transfer
GO:0009294PDNA mediated transformation
GO:0009506Cplasmodesma
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010638Ppositive regulation of organelle organization
GO:0019222Pregulation of metabolic process
GO:0030054Ccell junction
GO:0031056Pregulation of histone modification
GO:0031058Ppositive regulation of histone modification
GO:0031060Pregulation of histone methylation
GO:0031062Ppositive regulation of histone methylation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031399Pregulation of protein modification process
GO:0031401Ppositive regulation of protein modification process
GO:0032268Pregulation of cellular protein metabolic process
GO:0032270Ppositive regulation of cellular protein metabolic process
GO:0033043Pregulation of organelle organization
GO:0033044Pregulation of chromosome organization
GO:0044764Pmulti-organism cellular process
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051128Pregulation of cellular component organization
GO:0051130Ppositive regulation of cellular component organization
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051247Ppositive regulation of protein metabolic process
GO:0051569Pregulation of histone H3-K4 methylation
GO:0051571Ppositive regulation of histone H3-K4 methylation
GO:0051704Pmulti-organism process
GO:0055044Csymplast
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:1902275Pregulation of chromatin organization
GO:1905269Ppositive regulation of chromatin organization
GO:2001252Ppositive regulation of chromosome organization

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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