Detail information of g348578


Location
GeneChrStartEndStrand
g348578Scaffold_70441:HRSCAF_4535274712060880+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020257804.12.2e-244B3 domain-containing protein Os07g0563300-like
SwissprotQ0D5G4.27.9e-191B3 domain-containing protein Os07g0563300
trEMBLA0A5P1FHB51.6e-244TF-B3 domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G30470.146.232e-120 430HSI2;VAL1high-level expression of sugar-inducible gene 2

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag348578.t1
Allium fistulosumAfisC2G09295
Allium sativumAsa6G00314.1; Asa6G00315.1
Arabidopsis thaliana
Oryza sativaLOC_Os07g37610.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF02362.18B3Family34944851.85.2e-14
PF07496.12zf-CWDomain60164235.19.2e-09

Gene Ontology
AccessionOntologyName
GO:0003674Fmolecular_function
GO:0003700Ftranscription factor activity, sequence-specific DNA binding
GO:0006355Pregulation of transcription, DNA-templated
GO:0007275Pmulticellular organism development
GO:0008150Pbiological_process
GO:0009889Pregulation of biosynthetic process
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0019219Pregulation of nucleobase-containing compound metabolic process
GO:0019222Pregulation of metabolic process
GO:0031323Pregulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0048366Pleaf development
GO:0048367Pshoot system development
GO:0048731Psystem development
GO:0048827Pphyllome development
GO:0048856Panatomical structure development
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051252Pregulation of RNA metabolic process
GO:0060255Pregulation of macromolecule metabolic process
GO:0065007Pbiological regulation
GO:0080090Pregulation of primary metabolic process
GO:0099402Pplant organ development
GO:1903506Pregulation of nucleic acid-templated transcription
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:2001141Pregulation of RNA biosynthetic process
GO:0140110

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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