result

Gene information

Detail information of g349778

Location

Gene	Chr	Start	End	Strand
g349778	Scaffold_70560:HRSCAF_453646	195717	198095	-

Sequences

CDS

>g349778.t1
ATGAAAAATTCAACTGTTCTTGCATGCTTGATACCTCTCATTCTGTTTACAGAAAACTCTGTGTCTCAAAGCACCAGTTCACTTTCAAAAGGATCTTCTCTTTCAGTGGAAGACAGTTCGAACCCATTCCTGGTTTCACCAAAAAACAAATTCAAATGTGGATTCTACGAAGTCGGCACCAATGCTTACATCTTCGCAATATGGTTTTCAAAGTCTAATAAAACCATTGCATGGAGTGCAAACCGTGATCAACCCGTTAATGGCCATGGTTCAATAATCGAATTTCAGAAAGATGGTACCATGTCCTTAACAAATTACGATGGAAACACAGTATGGAGCACCAACACAAGCTCGGCTTCTGAAAAAGCAATGCTTTTGGATACAGGTAACCTTGTGATCACCGATTTCAGTAGTAAAATCATATGGCAAAGTTTCGACTTTCCAACTGATACTATTCTGCCCATGCAACCATTAACCAGAAATACAAAATTAACGTCTGCCTCTACTAGAGGCTCGGTATCCTCTGGCTATTACAGTTTACTTTTTGACAACGACAATGTATTGAAACTGATATACGATGGACCTGAGATTTCCAGCATCTATTCGCCTAACCCTGATTATGGGGTGTTTCAAAATGGAAGGAGTAATTACAACAGCAGTAGAATCGGAATTCTTGATGAAGAAGGAAACTTTATGGCTAGTGATGGATTGGCTTTCAGTTCATCTGATACAGGCTTTGGAATTCAGAGGCGCTTGACTTTGGACTATGATGGAAACTTAAGGCTGTACAGCTTAGATAAGTCAAATATGATGTGGTCGATTACAAGCCAAATGATTATGAACCTATGTGATGTGCATGGATTATGTGGTAAGAATGGAATATGTACTCCCAGCGGTTTTAATTCCAGGTTCAAAACAGTGTGTTCATGTCCTCCTGGATATGAAATGAGCGATGTCAAGGATTGGAGAGGAGGCTGTGAACCTAAATTTAATTTGAGTTTTGTGAAGCCAGAGAATTTGAAATTCATCAAGCTTCCAAATACTGATTTTTGGGGGTATGATCTCAATTATACATCAACTATATCGTTAAAAGGGTGCAAACATTTGTGTAGGCAAGAAAAATTATGCAAGGCAGTAAAATTTAGAGGAGGCGACTGCTTTGCTAAGTATATTCTCTTTAATGGACGGAGTTCTCCAAGTAATCAAGGCGATATTTATTTGAAACTGCCTAACACAAATTTGATGTGGAAAAGCAGTACTGATCAAGTGCATGAGATTGACTGCAATAAAAGTAAAGAGTACTACAACGCAACTGGCTCTTCGGGTGAAGTTTATGACAAGGGAACCACTAAATGGGTGTACTTTTACTGGTTTGTTACAGCGTTTGGTTCGACCGAGTTCCTTTTTATCTGTGCTGGATGGTGGTTTGTTTTTAGAAGGGATAAGAAACCTACATTGCTAGAAGAAGGATATAAAATGATATCGAGTCAGTTCAAGAAATTCACGTACAAAGAACTTAGAAAAGCAACCAATAATTTTAAAGAAGAGTTGGGTAGAGGAGGGTCGGGAGCTGTATACAAAGGATTTATGGAAGACAATAGATTGGTAGCAGTGAAGAAATTAGAAGATGTGGTACAAGGAGAAGAAGAATTTTGGGCAGAGGTAAGTGTAATTGGAAAGATATACCATATGAATCTTGTGAGAATGTGGGGTTTTTGTAGTGAGAGTTCGCGAAAACTTCTAGTTTATGAGTACATAGAAAATGGATCATTGGATAAACATCTCTTTGCTGATGATGGTAACAACTATAGTAGCCAAAGTAGGACTAATAGTTTGCTGTCATGGAATGCTAGATACAAAATAGCAGTTGGAGTTGCAAAGGCATTAACATACCTTCATCATGAGTGCCTTGAGTGGATTGTACATTGTGATGTAAAGCCTGAAAACATACTTTTGGATAGTGAGTTTGAGCCTAAAATAGCAGACTTTGGGTTGGTGAAGTTGTGCAAGAGAGGTGGAGTTGGATTAGACGTGTCACAGATAAGAGGAACTAGAGGATACATGGCACCAGAATGGACTTTGAATCTTCCAATAACTGCAAAAGCTGATGTTTACAGCTTTGGGGTGGTGTTACTAGAAATACTAATGGGCACCAGAGCATCAAGTGGTGATCTGATGAGCTTGGTTGAGGTTCTGAAAATTAAATTGCAGAAGGAAGGAAACTGGGTTGAAAATTATGTCGATGGAAAACTGAACAGAGAATTTAACTGCAAGCAAGCAATGCTTATGATGAAAGTGGCGGTTTCTTGTATGGAAGAGGAAAGGACTATGAGGCCCAACATGGATAGCGTTGCTCAACTGCTTGTGTCTGAATATTGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010921667.1	5.0e-264	putative receptor protein kinase ZmPK1
Swissprot	P17801.2	4.5e-193	Putative receptor protein kinase ZmPK1
trEMBL	A0A6I9RDP2	3.6e-264	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	33.33	4e-97	353		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g349778	AT2G19130.1	796	429	26	39	788	33	766	32.54	2e-97	353
g349778	AT1G34300.1	783	424	25	40	788	38	756	33.33	4e-97	353
g349778	AT4G00340.1	781	448	22	41	788	30	759	31.88	1e-83	308

Ortholog group

Species	Genes
Allium cepa	g131982.t1; g349778.t1
Allium fistulosum	AfisC4G03362; AfisC4G03365; AfisC4G03373; AfisC4G03379
Allium sativum	Asa4G02562.1; Asa4G02628.1; Asa4G02630.1
Arabidopsis thaliana
Oryza sativa	LOC_Os01g47810.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	74	168	91.8	2.2e-26
PF00954.17	S_locus_glycop	Domain	248	316	34.4	2.4e-08
PF00069.22	Pkinase	Domain	513	785	162.4	1.2e-47

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network