result

Gene information

Detail information of g349896

Location

Gene	Chr	Start	End	Strand
g349896	Scaffold_70567:HRSCAF_453653	388148	390880	+

Sequences

CDS

>g349896.t1
ATGGGTAAACGGTCATTAAAAATACAGAAGAAAGGATCTTTCTCTCTCTTTCCAGACTGCCTCCCATCGTCCAACCTTTCAAACATTCAATTTTCAAAAACATTCAATTCCACATTTTCTTCAAGTCAACTAAACGCACATCTCTTCTTAATCTCAATCATCATCGTCATCGTCATAAATGAAACCGCCCATTCTTCTCCAATGTCCCTCCTCCTCCTCCTCCTCATCTCCATCTTCTTCCTCCTCTCAATCCCACCATCACTCTCCGGCCAAATCTCCACCCAATTCCTCCTCCCCACCAACTTCACTTCCTTTCAGTTCATCGAAAACGCCGGAACCTTCCTCTCCTCCTTCAACTCCACCTTCGTCGCCAAATTCTACAACCCTCTTCTTCAGCAGCTCCAAGACACCTACTACCTCTCTCTTCTTCACGCTCCCTCCAACAGTGTCGTCTGGTCTGCTAACATCGATCGTCCAGTTTCATCAACGGCCATCCTTTCCCTAACCCACGACTCGCTCTCTCTTTACTACTCCAACGGCTCTGTTGCCTGGGCCACCCCTTCTTTTCCTTCCAGAGTCCACAGGCTTCAGCTTCTAGAATCTGGTAACCTGGTTCTTCTTGACAAGTCCAATATTTCTCTATGGCAATCCTTCGATCATCCAACTGATACTCTTCTGCCAACCCAAAAACTCCATGTCGGGTCCTTTTTGACAAGCCAATTTGGTGGGTACAACCTTTCAGTTACGGTTACGGATGTTATTTTGGCGTGGCATGGATCCCAGCAGTATTGGAGTCTATCTCAGGACCCAAAATCCGTAAAAGATTATAGCATAGATGCTTCATATTTGGAGGTTAATGGCACTGGTCTTTACTTGTTTGGTAAAGGTGAAAGGATTGTTTATAAGTTGCCTGTTCCAATGGCCGCTAGTGGGTTTCAGGTTGGAAAGTTGGAAAACGACGGTAGATTTAAGATTGTTACTTACATGGTTGGAGGCTCAACGGATGATTTTACTGCTCCGGTTGATGGTTGTGAGCTTCCATTTACTTGCAAAACTCTCGGGCTGTGTCCTATTGCGTCTAATGTGTCCTCCTGTACTTGCCCGGATTCATTTAGATCCAGTAAGGGCGGTGGCTGTACTCCTAGTGATGATTCAGTTCTTCCTTTGTCTACATCATTATGTAATTCGACATCAAATTCTTCTTCGGTATTGTATTATAACATAGGAGATGGAAGCAGGTACTTTGCAAACAAATATGCAACACCTATATACGGAAACTATTTTTCTTCCTGTCAGGATGCATGCTCAAATGAATGCACATGTCTTGGTTTCTTCTACATGAATTCTACTATGTCATGTTATTTGGTCTATAACCAATTAGGATCTTTGATTCAGACAAAGTTTTCTTCGGATACTAATCCAAATGGCTACATTAAGGTAATCAGGTCCTCTTCATTATCATTATCTCCTACTAATAAGCCTCAATCGTCAACTAGCATTCTACCAATACTACTTCCATTGATAGCCACCACGCTTTTACTGCTCATTCTTTTATTCGTGGGTCTTAAATGGTGGAGGAGGAAGAACAAGAAAAGGTTGAAGATTACACGTGTTGACGAATTCAAACTCGGTAGACATCAGTATTCAACTGAAGAAGCTGAAATCAGTGACAGTGAAGAGTTTTCAATCCCAGGCCTTCCTAGCCGATTCACCTACGATGAGTTGGAAGAGGCCACTAACAACTTCCAAACACTGATAGGGTCAGGCGGGTTTGGATCAGTGTACAAAGGGCAGTTGCCTGACAAAACCCTTATCGCCGTAAAGAAGATTACGAACATCGGACTTGCAGGCAAAAAGGAGTTCTGCACAGAAATTGCAGTCATCGGAAAAATCCACCACATCAACTTGGTCAAACTCAGAGGCTACTGTGCAGAAGGTTCGAACAGGCTGCTGGTGTATGAATACATGAGCCGTGGGTCGTTGGACAGGCCCTTGTTTGGGCGTGGCCCAGGCCCAGCCCTGGAATGGTGCGAAAGAATGGAGATTGCAATTGGAGCAGCGAGAGGTTTGTCGTACCTGCACTCAGGATGTGAGAACAAGATATTGCACTGTGATGTGAAGCCGGAGAACATACTATTAGGGGAGAATGGGCAGGTAAAGATAGGGGATTTTGGGATGGCAAAGCTGATGACTCCGGAAGAGACCGGGTTGTTCAGTAGGATGAGAGGGACGAGGGGGTACTTGGCTCCGGAGTGGTTGAGCAACCGGATGATAACAGAGAAGACGGATGTGTACAGTTACGGGATGGTGCTGCTGGAGATAGTGAGGGGGAGGAAGAACATGGATGGAGAGGAGGGGAGGGAGTACTTTCCGAAGGTGGCGGTGGAGGGGAGGTGGAAGGAGATGGTGGATGGGAGGATGGGAGGGAGGGTGGAGGAGGAGGAGGTGGAGAGGATGGTGAAGGTGGCGCTGTGCTGCTTGCATGAGGAAGGGTGGATGAGGCCAAGCATGGGGATGGTGGCGGGGATGCTGGAAGGGACGATGAGGGTGTGGGAGCCCAAGGTGGAGGGGCTTGAGTTTTTGAGGTTGTATGGGCAAGGGCCCGAGGAGGGAGGAGGCTCCGCGGTTGGCGGTGGGGGTGGGGGTGGGGATGTGACTCGGTCGAGGAGTAGTGGGGCTAGTATGTCTCTCTTGACGAATATTTCTTCCCAGGATGTTTCGGGGCCTAGATAG

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_010916822.1	8.7e-220	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370
Swissprot	O65238.2	1.7e-175	G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370
trEMBL	A0A6I9QXV4	6.3e-220	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G35370.1	43.10	0.0	655		S-locus lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g349896	AT5G35370.1	877	410	25	93	910	26	872	43.10	0.0	655
g349896	AT4G32300.1	836	478	24	73	879	4	802	34.93	1e-124	444
g349896	AT1G34300.1	768	439	25	119	853	46	765	32.29	1e-90	331

Ortholog group

Species	Genes
Allium cepa	g349896.t1; g468517.t1
Allium fistulosum	AfisC3G01061; AfisC3G05941
Allium sativum	Asa2G01097.1; Asa2G01098.1; Asa2G01123.1; Asa2G04936.1
Arabidopsis thaliana	AT5G35370.1
Oryza sativa	LOC_Os02g52850.1; LOC_Os09g28180.1; LOC_Os12g44320.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	149	235	73.0	1.6e-20
PF00069.22	Pkinase	Domain	584	796	160.7	3.8e-47

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network