result

Gene information

Detail information of g351755


Location
GeneChrStartEndStrand
g351755CHR1325010862325045114+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020599046.12.8e-85PHD finger protein ALFIN-LIKE 8-like isoform X3
SwissprotB8BJV8.11.5e-78PHD finger protein ALFIN-LIKE 8
trEMBLA0A1U7WYV88.0e-82PHD finger protein ALFIN-LIKE 3-like isoform X2

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT3G42790.157.033e-70 261AL3alfin-like 3

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag351755.t1
Allium fistulosumAfisC1G00332
Allium sativumAsa7G01187.1
Arabidopsis thaliana
Oryza sativa

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF12165.5DUF3594Family13137201.23.3e-60
PF00628.26PHDDomain18823638.19.6e-10

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0016049Pcell growth
GO:0003674Fmolecular_function
GO:0003676Fnucleic acid binding
GO:0003677FDNA binding
GO:0042393Fhistone binding
GO:0005829Ccytosol
GO:0005488Fbinding
GO:0005623Ccell
GO:0005634Cnucleus
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0006417Pregulation of translation
GO:0006950Presponse to stress
GO:0006970Presponse to osmotic stress
GO:0040007Pgrowth
GO:0007154Pcell communication
GO:0007275Pmulticellular organism development
GO:0009653Panatomical structure morphogenesis
GO:0009888Ptissue development
GO:0008150Pbiological_process
GO:0009267Pcellular response to starvation
GO:0009605Presponse to external stimulus
GO:0009628Presponse to abiotic stimulus
GO:0009651Presponse to salt stress
GO:0009889Pregulation of biosynthetic process
GO:0009891Ppositive regulation of biosynthetic process
GO:0009893Ppositive regulation of metabolic process
GO:0009987Pcellular process
GO:0009991Presponse to extracellular stimulus
GO:0010015Proot morphogenesis
GO:0010053Proot epidermal cell differentiation
GO:0010054Ptrichoblast differentiation
GO:0010468Pregulation of gene expression
GO:0010556Pregulation of macromolecule biosynthetic process
GO:0010557Ppositive regulation of macromolecule biosynthetic process
GO:0010604Ppositive regulation of macromolecule metabolic process
GO:0010608Pposttranscriptional regulation of gene expression
GO:0010628Ppositive regulation of gene expression
GO:0016036Pcellular response to phosphate starvation
GO:0045727Ppositive regulation of translation
GO:0019222Pregulation of metabolic process
GO:0021700Pdevelopmental maturation
GO:0022622Proot system development
GO:0033554Pcellular response to stress
GO:0030154Pcell differentiation
GO:0031323Pregulation of cellular metabolic process
GO:0031325Ppositive regulation of cellular metabolic process
GO:0031326Pregulation of cellular biosynthetic process
GO:0031328Ppositive regulation of cellular biosynthetic process
GO:0031667Presponse to nutrient levels
GO:0031668Pcellular response to extracellular stimulus
GO:0031669Pcellular response to nutrient levels
GO:0032268Pregulation of cellular protein metabolic process
GO:0032270Ppositive regulation of cellular protein metabolic process
GO:0032501Pmulticellular organismal process
GO:0032502Pdevelopmental process
GO:0034248Pregulation of cellular amide metabolic process
GO:0034250Ppositive regulation of cellular amide metabolic process
GO:0035064Fmethylated histone binding
GO:0042592Phomeostatic process
GO:0042594Presponse to starvation
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part
GO:0050801Pion homeostasis
GO:0048364Proot development
GO:0048468Pcell development
GO:0048469Pcell maturation
GO:0048518Ppositive regulation of biological process
GO:0048522Ppositive regulation of cellular process
GO:0048588Pdevelopmental cell growth
GO:0048589Pdevelopmental growth
GO:0048731Psystem development
GO:0048764Ptrichoblast maturation
GO:0048765Proot hair cell differentiation
GO:0048767Proot hair elongation
GO:0048856Panatomical structure development
GO:0048869Pcellular developmental process
GO:0048878Pchemical homeostasis
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051171Pregulation of nitrogen compound metabolic process
GO:0051173Ppositive regulation of nitrogen compound metabolic process
GO:0051246Pregulation of protein metabolic process
GO:0051247Ppositive regulation of protein metabolic process
GO:0051716Pcellular response to stimulus
GO:0055065Pmetal ion homeostasis
GO:0055080Pcation homeostasis
GO:0060255Pregulation of macromolecule metabolic process
GO:0060560Pdevelopmental growth involved in morphogenesis
GO:0065007Pbiological regulation
GO:0065008Pregulation of biological quality
GO:0071214Pcellular response to abiotic stimulus
GO:0071470Pcellular response to osmotic stress
GO:0071472Pcellular response to salt stress
GO:0071496Pcellular response to external stimulus
GO:0071695Panatomical structure maturation
GO:0080090Pregulation of primary metabolic process
GO:0080147Proot hair cell development
GO:0090558Pplant epidermis development
GO:0090627Pplant epidermal cell differentiation
GO:0097159Forganic cyclic compound binding
GO:0098771Pinorganic ion homeostasis
GO:0099402Pplant organ development
GO:1901363Fheterocyclic compound binding
GO:2000112Pregulation of cellular macromolecule biosynthetic process
GO:0104004
GO:0140030
GO:0140034
GO:1905392

KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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