Detail information of g35285


Location
GeneChrStartEndStrand
g35285Scaffold_20977:HRSCAF_20332999235100243+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020276091.13.3e-82heat stress transcription factor B-4b-like
SwissprotQ9C635.14.8e-54AtHsf-02
trEMBLA0A5P1ECN32.3e-82HSF_DOMAIN domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT1G46264.162.216e-73 270AT-HSFB4;HSFB4;SCZheat shock transcription factor B4

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag35285.t1; g359492.t1; g362628.t1
Allium fistulosumAfisC1G02669; AfisC1G03946; AfisC2G03998; AfisC6G06314; AfisC6G06315
Allium sativumAsa0G03146.1; Asa6G01673.1
Arabidopsis thalianaAT1G46264.1
Oryza sativaLOC_Os03g25120.1; LOC_Os07g44690.1; LOC_Os09g28200.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00447.14HSF_DNA-bindFamily26115110.73.6e-32

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0003674Fmolecular_function
GO:0005488Fbinding
GO:0042802Fidentical protein binding

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K09419HSFF; heat shock transcription factor, other eukaryoteEC:- --

Expression pattern in different tissues

Expression pattern in BioProjects

Click here to link to expression search in BioProjects.  



Co-expression network

Click here to link to co-expression network search.