result

Gene information

Detail information of g354207

Location

Gene	Chr	Start	End	Strand
g354207	CHR7	37875915	37881271	-

Sequences

CDS

Protein

>g354207.t1
MEREAPIFLHQPIPIRFHEAPVLVKKRDFPWQSQNVNHSNTPQASHWIANQNTWNQNLWEWDSQKFVAKSASDSPELPDKSVKVQNVSKKLEVEGQNLALKLGVAEEPVVRPCKRVRAGSPGSSGNYPMCQVDDCKTDLSNAKDYHRRHKVCDIHSKCSKAVVGNHVQRFCQQCSRFHPLSEFDEGKRSCRRRLAGHNRRRRKTQPEDVSSKNAPPINTVNNNITNSNLDIVNLLSIITNLQGNNATKQTDSTALPDKESLIQLISKINTISNNSSQKSTGLDLNVALSQECVDQSCKTNEHPTAASTVDLLKVLSAAVSNPNALTSLSQGSSFSSGDDKAKTSTDANMTMKQPPKQNFPLQLFGSGEDTSPPNFAASVKYFSSECSNPMEDGSPSCSPPAVQKLFPIHSTIHEKHERMSVFREDDDNMVELSTSQEWNTRLELFNESNRRAQNNAGHNNPYQGGGYASSSLSNHSPSSSSSDAQDRTGRIIFKLFDKDPSKIPTTLRTQIVNWLAHSPSEMESYIRPGCVVLSIYASMPSIGWDELEEDLHQRVSSLVEDSQSEFWKKGRFLVRTSKQLASHKDGKIRLCKSWKTWSAPEVASVSPIAVVSGQETSLVLKGRNLTVPGTKIHCTFMGRYTSKDVLGPVHPGTVYDDSSFESLTFPGGFPSEFGRCFIEVENGFKGNNFPIIIANSMICQELRSLESEFDDGTRTSDVNSEDQIRYTGQLRSREDLLHFLNELGWLFQRKSSQDPHSLEFSATRFKFLLTFSVERDWTVLIKMLLDTLVEKSLNCEVLTQESLEMLLETQLLSQAVKRKCRKMVDLLLNYYVIKDSNSRVRLFTPSTVGPGGLTPLHIAASMDDSEDIVDSLTNDPEKIGMNCWDSILDESGQTPYMYASQRNNHSYNKLVSRKLVDKKNGQVSINIANDTSMDKSWIVPDSRRLEVVCSKCAFMEKVRGRPMARARGLLGRPYVHSMLAIAAVCVCVCLLFRGSPQIGSVAPFKWENLDFGPS*

Gene

>g354207.t1
ATGGAAAGAGAAGCTCCTATTTTTCTTCATCAGCCAATTCCAATCCGATTTCATGAAGCTCCAGTATTAGTTAAAAAGAGAGATTTTCCATGGCAATCACAAAATGTTAATCATAGTAATACCCCACAAGCTAGTCACTGGATTGCGAATCAGAACACGTGGAACCAAAATTTGTGGGAATGGGACAGCCAGAAATTTGTTGCGAAATCCGCTTCCGATTCACCAGAACTACCAGACAAATCTGTAAAAGTTCAAAATGTGTCTAAAAAACTGGAAGTTGAAGGCCAAAATCTAGCACTGAAGCTTGGAGTAGCTGAGGAACCGGTTGTGAGGCCATGTAAGAGAGTACGAGCAGGCTCACCAGGCAGTTCTGGCAATTACCCAATGTGTCAAGTGGATGACTGTAAAACAGATTTATCGAATGCAAAAGATTATCATAGAAGACACAAAGTGTGTGATATTCATAGTAAGTGTAGTAAGGCGGTTGTAGGGAATCATGTGCAGAGATTTTGTCAGCAGTGTAGCAGGTACAATTGAGCTTAACCTGAAATCAGAAATTCTCTTTATTGTTTAGTTTAGTATGATGTTGAACAGCAACTGTTTTGATTGTCTTTGCCTTTTGGTTACATTTGTATAGTCCATTGAGTGAACCTTGTGGATTTAGATGTTACAACCAAAATGTTCGTTTAGATAGATTTAATATAGTTTTTGAAATTATCTGCATCCCTGTAGTGTATGCCTGTTTTTAGTGATGCTATTTGAATAATTATGTGTATATTTCACTACTCACACCATTTTTTTAACAGTAGACAATTAGTCATTCAATTTTTTTCATAAAATTCATCTCTTTTTGAAATGATTTGTTTTTAGATTTCAAGTAATGATTAACTATATATTTCATGGTGTAGATTTCATCCCCTCTCAGAATTTGATGAGGGCAAAAGAAGCTGTCGACGTAGATTAGCGGGGCATAATAGGAGAAGAAGAAAGACACAACCAGAAGATGTTTCCTCTAAAAACGCACCTCCAATTAATACTGTCAACAATAATATCACCAATTCAAACTTGGATATTGTCAATTTGTTATCTATCATCACTAATTTACAGGGTATATTTTCCATCTAGATCATGGATTTGAAGTTTGAAACGATTATGTTTTTCTATGATTTTTTGTAATCATTCTGAGATATTCATAATTTTGCAGGTAATAATGCAACCAAGCAGACAGATTCCACTGCTCTTCCTGATAAAGAAAGTCTAATCCAACTTATTAGTAAAATAAACACAATATCTAATAATTCTTCACAGAAATCGACTGGGTTGGATCTAAATGTTGCACTATCACAAGAATGTGTTGACCAATCCTGTAAAACCAATGAACATCCAACTGCTGCTTCAACAGTTGACTTACTTAAAGTTCTATCGGCTGCTGTATCAAATCCTAATGCTCTTACTTCTTTATCTCAAGGGAGCAGTTTTAGCAGTGGCGACGACAAAGCAAAAACATCTACTGATGCCAACATGACTATGAAACAACCCCCTAAACAGAATTTCCCGCTACAACTATTTGGTTCTGGTGAAGACACCAGTCCTCCAAACTTTGCTGCTTCTGTAAAATATTTCTCTTCTGAGTGTAGCAATCCAATGGAAGATGGATCACCTTCTTGTTCCCCTCCTGCAGTACAAAAGTTGTTTCCAATACATTCTACTATTCATGAAAAGCATGAAAGAATGTCTGTTTTTCGGGAAGATGATGATAATATGGTTGAATTAAGCACAAGTCAAGAGTGGAATACTCGTTTAGAGCTTTTCAATGAGTCAAATAGACGAGCACAGAATAATGCAGGTCATAATAATCCATATCAAGGGGGCGGTTATGCATCATCTTCTCTATCAAATCATTCACCATCCAGTTCAAGTTCCGATGCTCAGGTATCACATCCTTCCATTTTTCTTCTTCTACTAATATTGAATATTTTGGCCTAACATGGATAATTATTTAATAAGGATCGAACTGGAAGAATCATTTTCAAGCTTTTTGACAAAGATCCGAGTAAAATACCTACTACGTTACGGACTCAGGTGAGTCAACATATGACGCTGAGGTTCCACTTTTATTTATTTATTTTTATTATGTTTTACCTAGTAAAATTCGTTCTCTACAGATAGTAAATTGGCTAGCCCATAGTCCATCTGAGATGGAAAGCTATATACGGCCGGGATGTGTTGTTTTATCCATTTATGCATCAATGCCATCTATTGGGTGGGATGAAGTGAGTACTTATATTTGTGTTTAGGGCAATGTTTGTTGTTTTTGTGATACAATAACTAACCATGTTTGTGAGAAATATTTGTATTTGTATGACGATAACGTAGTTAACTGGTAAAATAATATTTGGTTGTAGCTTGAAGAGGATCTTCATCAACGTGTGTCATCACTAGTTGAGGATTCTCAGTCAGAATTCTGGAAAAAAGGGAGGTTTTTAGTTCGGACGAGTAAACAACTTGCATCTCATAAAGATGGTATGAGCTGTTGATTTATTACCATTTGAATGCATTTATCGTTTATTTATATGACTATTTTTAACTTTGAAGGTAAAATACGTCTTTGTAAGTCATGGAAAACATGGAGTGCTCCTGAGGTTGCTTCTGTATCGCCTATTGCAGTTGTTAGTGGGCAAGAAACTTCACTTGTTCTTAAAGGTCGCAATTTAACTGTTCCTGGAACCAAGTAAGATTTCATATCATATTAAAATATGTTATTTTAGTGAATGCTTGCTCATTGCAATAACGTGCACATTGCAGAATACATTGTACGTTTATGGGGAGATATACTTCAAAAGATGTTCTTGGTCCAGTGCATCCTGGTACAGTTTATGATGATTCTAGCTTCGAGAGTTTAACTTTTCCTGGAGGATTTCCATCTGAATTTGGTCGTTGTTTTATCGAGGTAAATATTTTTGTTCAAATGGTTAAACTATTTTGATTTTTTAACCTCCACGTGTTTCTACACACACGCAACACATATACACAGGCACACACGTGTGTACACACACATATAACACACACATTTGGAGTTACACTTATGTAGAGTGGGATCCACATTTTGGTTTTTATGTATCCCCTGATTTGTGCTCAACAAGATTTTAGGCATTTTCGATCATATGAAGTTGATAATTTTCTGTAGGTGTGGTTTACATATTATCTATATAAACTCTACAAACAATTACCTTATTATGCTAACTTCTGCCCCTAAACATAAATTCTTTCATACCAATGATTATAATATATATTTTTATTATTATTATTATATATATATATATATATATATATATATTGCATAATATATCGTTTGTAGAGATGATGTTAATGATAAGTATAACATCTACAAAAAATTATCAAATTTCGATAATCATACAAACTTTATATCAAGTTGCAGATACGAAAGAATGGGGTGCAGTTCGTGCCTCGTATATGTATGTATGTATATGTATATATGCTTATTTGAGTGAGTGCGCACATATAGATACATAAATATGTGTGGATGTCTCAATGTAACACATAAAAGATCATGAGACGAATACCTCTTTTTTCAAGACCGGTAGAAGCCTTTTTGAATTTTGAGACACAGTTGAGTGTTACGTCTACCTGAGAACTATGCAGTTTTTAATGTTCTACTCTAGAAAATAATCTGAATATAAAAAGCTAAACGCGTATACCTTAATCATACTGCAGGTGGAAAATGGTTTCAAAGGAAACAATTTTCCCATCATTATTGCTAATTCAATGATATGCCAAGAGCTAAGATCCCTTGAATCTGAATTCGACGATGGAACTAGAACCAGTGATGTGAATTCTGAAGATCAAATCCGATATACAGGTCAACTAAGATCAAGAGAAGATCTTTTGCATTTTCTTAACGAACTAGGATGGCTTTTCCAAAGAAAGAGCAGTCAAGACCCACACTCTCTAGAATTCTCTGCTACACGGTTCAAGTTCCTACTTACATTCTCAGTCGAGCGAGACTGGACAGTACTCATCAAAATGCTCTTAGATACACTCGTCGAGAAAAGTTTGAATTGTGAAGTCTTGACTCAAGAATCATTGGAAATGCTTCTGGAAACACAGTTATTAAGCCAAGCTGTGAAAAGAAAGTGCAGGAAAATGGTGGACTTGTTACTAAATTATTATGTAATAAAGGATAGTAATTCAAGAGTGCGTTTATTTACTCCCTCCACAGTTGGTCCAGGTGGTTTGACTCCTTTACATATTGCTGCATCTATGGATGATTCAGAAGATATAGTTGATTCCCTAACAAATGATCCGGAAAAGGTACGAGCTTATGTTTTGTATTTGATTGAGTTTCTTCTTTTGTTTTTGTTTCTCTGCATCGCACTCGTTGGCACGTACATATGCAGGTACCGGGTGGAATCTAAGATCCCCTCTTATTTACCACCTTTGTCTTTTTGTGCAAGTTTTTTTTTTCCGATTGAAGTAGAATTTTGTAGACATTCATAGTTCATTAACATATCATTTATGCTAAATTTGAAATCATTTCTACACTTCTATACCCTTCAAAATTACATTTCAAATTTGATGGTTATATAAATATTTTCGATGTTTAAAATTAGCATAGAGGATCTTGGTAATGAGTTAAAAAAAATTAACATAAGTACAAAAAGTCACTTCGATCTGGAATTTTTTTGCACTAAAGGATGGGGAGGGATTTACAAGAAAGGGGATATTGATCCTTCTCATATGTGTGTATGAGTATGTGCATGCGTGACTGTGTGTATATACATATGTGTGTGTTTATTCACACATTTTATACAATCCAAAGAACCAAGTTTCTTTAGTAAACCGCGAGAAAGTGTGCTTCCAACTGACCAGTGATAACCCTACATAATCCATTGAGTATCTTATTAACACAAGGTTACTATATTCAGATTGGCATGAACTGCTGGGATTCAATATTGGACGAGAGTGGTCAGACTCCGTACATGTACGCTTCACAAAGAAATAACCACTCTTATAACAAGCTCGTGTCCAGAAAGCTTGTTGATAAAAAGAACGGACAAGTATCGATAAATATTGCAAATGACACATCCATGGACAAATCATGGATTGTGCCTGATTCAAGGAGACTTGAAGTAGTTTGCTCAAAATGTGCATTTATGGAGAAGGTACGAGGCAGGCCAATGGCACGGGCACGAGGGCTTTTAGGCCGGCCATATGTGCATTCCATGCTTGCCATAGCTGCTGTATGTGTTTGTGTCTGCTTATTATTTAGAGGCTCGCCTCAAATTGGCTCTGTTGCACCCTTTAAGTGGGAAAATCTGGATTTCGGTCCAAGCTAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020268251.1	0.0e+00	squamosa promoter-binding-like protein 15 isoform X2
Swissprot	A2YX04.1	4.7e-219	Squamosa promoter-binding-like protein 15
trEMBL	A0A6I9RTI9	0.0e+00	squamosa promoter-binding-like protein 15 isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G20980.1	44.77	0.0	813	ATSPL14;FBR6;SPL14;SPL1R2	squamosa promoter binding protein-like 14

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g354207	AT1G20980.1	1081	467	27	5	1012	10	1033	44.77	0.0	813
g354207	AT1G76580.1	1017	468	24	51	1012	6	986	45.03	0.0	785
g354207	AT2G47070.1	550	310	14	484	1014	357	881	35.64	2e-89	327

Ortholog group

Species	Genes
Allium cepa	g354207.t1; g425776.t1
Allium fistulosum	AfisC6G03865; AfisC6G03869; AfisC7G00731; AfisC7G00789
Allium sativum	Asa3G04270.1; Asa3G04271.1; Asa8G03191.1
Arabidopsis thaliana	AT1G20980.1; AT1G76580.1
Oryza sativa	LOC_Os08g40260.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF03110.11	SBP	Domain	130	203	98.4	1.8e-28

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0001067	F	regulatory region nucleic acid binding
GO:0003674	F	molecular_function
GO:0003676	F	nucleic acid binding
GO:0003677	F	DNA binding
GO:0003700	F	transcription factor activity, sequence-specific DNA binding
GO:0016020	C	membrane
GO:0006952	P	defense response
GO:0042742	P	defense response to bacterium
GO:0005488	F	binding
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009889	P	regulation of biosynthetic process
GO:0009891	P	positive regulation of biosynthetic process
GO:0009893	P	positive regulation of metabolic process
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0010557	P	positive regulation of macromolecule biosynthetic process
GO:0010604	P	positive regulation of macromolecule metabolic process
GO:0010628	P	positive regulation of gene expression
GO:0044212	F	transcription regulatory region DNA binding
GO:0045935	P	positive regulation of nucleobase-containing compound metabolic process
GO:0045893	P	positive regulation of transcription, DNA-templated
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0031323	P	regulation of cellular metabolic process
GO:0031325	P	positive regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0031328	P	positive regulation of cellular biosynthetic process
GO:0043207	P	response to external biotic stimulus
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051173	P	positive regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051254	P	positive regulation of RNA metabolic process
GO:0051704	P	multi-organism process
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071944	C	cell periphery
GO:0080090	P	regulation of primary metabolic process
GO:0097159	F	organic cyclic compound binding
GO:0098542	P	defense response to other organism
GO:1901363	F	heterocyclic compound binding
GO:1902680	P	positive regulation of RNA biosynthetic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:1903508	P	positive regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140110

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network