result

Gene information

Detail information of g357844

Location

Gene	Chr	Start	End	Strand
g357844	Scaffold_71586:HRSCAF_454672	147128	154136	-

Sequences

CDS

Protein

Gene

>g357844.t1
ATGCCAAATTTCGACAAGCTAACAATACTTTTGGTGGATGATGATATGCTTCAACGGAGAATCTTAAGAGCATTACTCAAAAAATGTGGAGTAATGCATGTTCAAGAGGCAACAAATGGTAGGGAAGCTGTGGGTCTTGTTAGTAGTGGTTCAACTTTCAATATCATCTTTATGGATAGAGACATGCCAGAACTAAATGGTGTTGAGGTAACTTTCACAATCTATCATTCCATTAGATAATTAAAGATTATCCATAAATTCATTAGGATACATATTTCTACACGATTATCAAATATTGAAATTCCATATTTATATTTCACTAATCTACCTGGATCAAACTACTTATCATTTGTGTTAGCAAACCCTAATTTTTTATTTAACATGTTTTTGGAAATACGGAGTATAAAGTTATGATAAAAATGAGGTACCGAAATAGCTAAAGAGTGCTATTAATAATATAAATAAGGGAAAAAACTACTCTACAACTTCCCCGCACTTATGAGAGAAACACTTGTATTTTCCTTTAATAACCAATGGCGGCGGCTTTCTTTTTTTATTTTCTTATATTATATTCATGGGAATTTAAAAATCTTGAAAATTGAAATTAATATACGATTCTTGACTCAAATATCTCAAAACAATAGCTACATAACTATAAAAACAAATATGATAAACCTTATGGAAAAATTTAAGGATGTTTCCAACAAATTACATTAGAAACTCGATGAAAAAAGATTAACACCTCTGCAAGTTCTGCATAATTTAAATAATTTTTCTTCAAATATACTAAAGCTTTGCCATATTCTATTCTTCGAGAATGTACTTCTTGCAAATGCTCTAGTTTTAATTACAATGCTAAAACATGTATATGTGACCTTATACACAATAAAATGAATAATCACTAAGTGGATCCACCATATCATTCATTTTCCAACTATGAGGGGAAAGTGACCTTAAGATGTGAGAAAAATAGACATTTTTGTTAATTCATAGTATACACCAACTTTTCCATTAAAAATAAAGCGACATTACATAACGTTTTCATTTGTGTGAAAAATATAGAACAAATACGTTATAGTAATTATCAATGACATTCAGTAAAATGATATGAATAAAGGTTAAAAGAATCAGATAAAACTTGTCAAATTTTGAATAAAAATGGGACCAATATTTTTATCAGTATCTCAAAAACTACGCGGTTAATCATGTTTTTGTGTAAAAAAATTTATGTGCATTTTGAGTAGTTTATTCTCACAACAGGCTTAAATATAAAAGTATTTAATATTAGGGAGTACAAAATAAAATATTATGTATATAAGAATAAAGAGTAAACCAAGACATATATCCTAGAATTAAATCTTGATTTCATCCATTAGTCCCATGATCGAATGTACTAATAAAAAATACCTAGCTAATATGGTTTTCCTTTTTTGAGTACTCAGGTAAATCAGTTTTCAATACGCAACTTTTTAATGACAATAGCATATTTATTTTATAAGGTAGTTAGATTTTAGAATCAAAACGGATATGCAATGTACCACAGTAAAGATTATTACATAATCATTTGCATGTTTTTTCATATGCATTCTATAATTATAAAGATGTGTTTACACCAGTAACAAATTTATGGTAAAATATCTATGAACTGAGTTATGCGGAATATAACCTATATATCATAGCATCTGTTATTGTGTGTATAATTCAATTTTAAAACAATAGTCTTTACAATAATAATTATTATTGAAAGATTACTAGTTGGTACAATTATTTAGATATTTGCTACTTTATTATAACAAGGTAACCTTAATTTTTTTTAAATTTTATGGAAAATATTATACAAATCGATGATGATGATGATTATATTGAAATTCAATATGTGAATATGGTTATGAATTAATTAGACACAATGATTTAAAAATAATGAAAATGAATGAAGAAAGTGGAGTTCATAAAATTAGAGATGTCACTGCCAAACAGTGACAGCTTTGATATATACATTAATACTTGACCATAAACCCATTACGCCGTGCTAGGTTCCATTATTTTTAAAGAGATCTAAATTTTTCTTGAAAATTAGAAACTGGGTAAAATTATGTAATTAATTGAAATAAGGATTATAAAAAACTTCAGCCATGAGAATGAGATTAAGATTTGCATAATTTTACTATGAACTTGAAGTTAATTTAGACTAAGAGCAAAGCTTATACCTAGATAAATCATAACATGAATATCTTTAATTTTTTACAAGTTAAATTAGAAAATAATTAAAGATGAAAAATTAAGTAATTTTAATCATTGTACATTGTTAAATACAACATATTCCAATCAAAATTACTAGTAAGGAAATGTCAAAACAAACATAATTGTACTAAACATTTCTTTGCTCTATAAATTTTATTTGGATATCTTTTCTAAGAACACAATGTTGTTTCGGATATATAATTTTAAATGGTAAGTAAATTATTTTGAATTACATCGAGTAGGTAGGGAAATCTATTTTTGAACGATATCGAGGAAGTAATGAAGACATTTATAATTTTCCTTAACTAGCGATGTAAGAGACGATAAGTATTTCCCTCTAATAAAGGATTGGTAGAGGCACGATTTATATTTATCCTTTAACATAGTGAATCTGATTCTTACAGTTCAAAAATATGCATCTCAATAATATAAAATTTGGGGAAATTAAAATTAATCTTGTGGAATTAGGTAGATTCTCAGATAGTCATTTCTCATGATAATTTTCTTTGTGTCAGGCTACTAATCAGATTAGGTCTATTGATGCATCTGTAAAGATATTTGGGGTGAGCTCGCACACTGACACATCAATTATCAAGGACTTTCTGGATGCAGGACTAAATGGCTTCTATACAAAACCGATGACAATAGACAAACTTATCGAACTATTGGATGGACTTGCAGTTGAATAAAATATGGTTACAACTTGTATATCGATAATTAAGACAATGATTATAGTGAATAAATGAAATTAATATGGTAAAATAAGTTGTGTATTTTAATTTCTTATTGAAATATGGGTATTTTATATTATTAGATTTCATGCTTTAATTTATTATGTACTTATTTTAAGCAATATCCATGTAAAATAGTAATTCGATGGAATAAAAATTTAGCAACTATGTATCACTAAAATACATGCATGCTTACGTACACACTCACACTCTCACACACACACACACTCTTATACTCTCATATAGATATGGGCGCGCAGACAAAAACACAATAAGATTAACCCAAAGTGATCCCATTTGGTTCACTGACACTTGAAAATTAGTTTTATCTCCGTTTCCATGCATAAATTAGACCAAAGTTTAATGAAATAGTAACATTACACTTAATTGCATATTTTACTACCATGCATTATGACACAAGCTGCATGGGTGATCTAGTATAGCAAAATATACTCCATTCATATTTGTAAATGAATGTCTACTCATCTTGGTTAACTTTAGGTAGTTAACTTCTCATTTTACAAATACAAGTTAATGCTAATATTAAACTAGTTCACGCTATGCCAAAATAAATTTCAAATTAAGGCATGCAATATTTACAAACCTAATAAAGATACTACTATGAAATTAATCGTATTACAGTATTTCGTGTTATAACAAAAACTCTAAATTGACTACATCAACGTTGTATAAATAATTACTTAATCGCTTTCCAATTTTTTTCCTAAGAAATGGCAAAAATTGATATATTGGCCTTAAACAAAATTATAAGGATCTATGGTTGACATAGGTGATGAACGCTTAGAGTTCTACTATTTGATATCCAAAAATAGCGTTAAAAGCATTTACAAAACATAGTTAATGGGAGTGTTGAACAGTTGGTCATACTTGATGATATAACACAACATATCTTTCATTTTTTAGTGTTGTATATTAAAGGCAAATATATAAAACACTTTGTATAATTAAAACTAAAAGAATCATAAATGATGATAAAGTTATTTTAATTTTTCTAAATGTATCCAAGGAACAGGGGGACAGTAATGTCACTTTTAAAAAAATTTCATTATCGAAACATTATTGAACTCCAAATTAATTATTCTTATAAGCTCTTCTCATGCTATAGTATAATATATCAAATTATTTAAAAACATGTTGCATAAGAATGAAAATGGCCACATAAGAATTAGTGTTCATAATTAAAAATTATAATAGCCCGTACCTTAATGAGCCCAAATTTTGATAAAAATCCAAACCCAAGTCCATCAAAGCACAGATTGTTGGATTTGGTACCTACAAATAAGCACGAGCATTATCAGAGATTGATAGAAATCTAAATTCACAACGAAACGAATAATAAGATAAATACTTACTATGAATGCTACCTTGGAATCAAGGGAATTCTTTGGGTATCGTATTTCCACATCAGCATCGAGCATAAGTGGAAAGAAGACTTTTCCAACAACTAAACATGTCCGTCCTAGTGACATGTTCCTCTAAAATCTATCATGCGGGTGGTAATGAGGAGGGGGTCAAAAGATAGTTTTAGTTACTGGAAAAATCTATAAACGGTCCATAACATAAATTTACACAGATTGGTTTCCATGTAACTATTATGCCTATTAAGGTTAGCAATTTTAATCTAACCTTGCATTGCACATATTTACCTATCCATTCCCAACGTATGAAATACTGATGAAGCCTTATCAACCACCCAATATTTCCAAGTCCATTAGCCACGTGATACTTCTAAATATGAAGTGGGATTCTACTATCTCCACATAAGACTTTTAAAAGAGAATTAAGCAGGCTTTTCCATTTAAGACCTCAATTAAGGTTGACTCCATCATTTAAGACCTATTTCCAAGATGGACTACTAGCATCATCATTATTGGTTTATTAGTCCTAACTATAGAGATCTTTGACCACTATATATGATCTTATAATTTATAATAGTCATACCACAAATGCATCTATCATTATTATAGTCCTAGCAATGTGACAGACTGTACCCAAGCCAAATAATACCTCATTAATAAGGACTAAGTAGGCCTCTGACCATTTAACACCAATTTATAGGTAGGCCTTTGCTATTTAATACCCAACCCCAAGGCGGACACCTCACTGGTATTATCTAGCTGACATTTTTGGAAATCTCATTGGGCTACATAAAACTTCTTTCATATGAAAGAAGCGGAAACTGATGCCACTTAATACCTCAAACCTAAGGCAAACCTTTCTAGAGATATCCACCATCACTCTTAATTATAAATGTGGAATCTCATTAGGTTACTCCTTTCGGTAGGGAGGTGGGCCATACAATTGCCAATTAATACCTCAACACTGCAGTAAACGTTTTTAGAGATATACTTAATTATTTAGAACCTTAGTAGGTTGCTTAATACTTCTTTTTAGGAGGGAGGCAGACCCTAGAGCCGCTTAATACCTCAAACCCGAAGCAAACCCCTATGGAGATATCACTCGCCGGTCCTTATTCCAAATTTGGACCATTTAATCCTTTTCAATTAGGAAAAAAGGCCTAATCTCTCATGCCATCATGGGTCTTAGGGTTAGTGATACCTCACATTAGTAGTAAGTGCAAGGGACCGTTGTAGCCTTAAAGTGAAAGTCAGTCTTCTGTCGAGTGACTCTAGTGAATCGCATCACTAACACACTAAGCTCAATTTACCATCCTAAGTCTTTGCTTATATTATCTTAGGTAGACATTGGACTTAGCTTACCAATTCCGTTTTTATTGAAGGCAATAAGATTTACATTCAATACTTATCTATCCATAAATTCCCTTTTTAATGCTCATAAATGTCTATTTGCCCATAAAATCCCAACAAGCAATTCCATAGACATTTATGTATGATTACTAATTCCAAGTAAGTAACCTTTTTATATCTATTCCATTTTTATCAGTCCTATAAATACATTATCTCTATTAATTGTAACTCTTAATTTAATACTATCCATTATTTATCATTTACTACCCATTAATTTAGGTTATAATATTTCATTTCCTATTAAGTAATTAGTATGAATTCCTATTTTATTTCCTATTAATAGGAATTACTACATTTCTTAATTTTACCTATTCACTTCCCTAAATATAATGATAACTAACAAACATTACGCATAAATAACGCATGAATAAACGTTGTTCTTCCTTAATAATGCAATACGTACAAACTACCTTGTGACGACCCAAAATTTTTGGTATTTGAATTTGAAAATATTTAAGTGGTTTGAAATGTTTGGAAGATAGTTTAACTTGGATTTCAATATTCGTAGCTATCGTGTGATCGTACGAAATATAAACGCCTAGAAAATAATTAATTGAATTAATTTTAATAGTCAATTCAAAAAGCTATCTTCTCTATACGATCAAATTTGGACTCGAAACCTTTTCCATTGCGTTCGAAACAGGCGTATAACATTATAGACGCTTAGCGGCATGCCTCGATAGGACGTCGAGATTTTGAGTTGCAATTATCGAAACAATTTAAATTTGAATTAGAATTAATATATATTTTTATACCCTAGTCAATCTCCAGCTACATTTCTATCACATCAGCACACAAACTTCACGTCCCTTTCATTTCATACTTTACGCAACCTTTCCAGCTGAAATATCAGAAGAAAAAATCAATGCCGCATTCATCTTTCTATATTTCTAACCCAATTGTGCATCTCCCTTTCCCCAAATTCAGAAATCAAGTTCGAATTTTACGAAATCAATCATTAAAAAAAATATTAAAAAAAGGGCAGCCTACTTCCTAATCAAAAATGGTCGCGGGCGAATTAAACTCGAAGCGGCGGCATGGCGCATCGCCTCACACGCGTAGGGGGGATTCGCGAACTATAAATCTCGATGTTGTCACGATCATCATGGCCGAAGGAAGGCGCAAGCGTGGAGGCTCGCGCAAGGCGTGGCAGCTCGGCTAGGCTCGCAGCAAGGTCGTGAGTCAGAGCAATCGAGTCTTTTGATTTGGGGTTGTGCATACTCGAATCGAGGGTTCAAGCGACGATAA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_030958847.1	9.9e-08	two-component response regulator ARR22-like
Swissprot	Q9C5U0.1	4.5e-05	Protein WOODEN LEG
trEMBL	A0A1J7GXI4	7.9e-07	Response regulatory domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G26594.1	40.28	2e-09	57.8	ARR24;RR24	response regulator 24

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g357844	AT5G26594.1	72	40	2	1	70	10	80	40.28	2e-09	57.8
g357844	AT2G47430.1	119	63	3	9	115	988	1099	31.09	8e-09	55.5
g357844	AT3G04280.3	63	33	2	7	68	22	83	44.44	8e-08	52.4

Ortholog group

Species	Genes
Allium cepa	g233236.t1; g258183.t1; g357844.t1
Allium fistulosum	AfisC1G00428; AfisC1G00433
Allium sativum	Asa7G00801.1
Arabidopsis thaliana	AT3G04280.1; AT3G04280.2; AT3G04280.3; AT5G26594.1
Oryza sativa	LOC_Os03g53100.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00072.21	Response_reg	Domain	9	69	47.6	1.5e-12

Gene Ontology

Accession	Ontology	Name
GO:0000156	F	phosphorelay response regulator activity
GO:0000160	P	phosphorelay signal transduction system
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004721	F	phosphoprotein phosphatase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005634	C	nucleus
GO:0005737	C	cytoplasm
GO:0043231	C	intracellular membrane-bounded organelle
GO:0006355	P	regulation of transcription, DNA-templated
GO:0006464	P	cellular protein modification process
GO:0006470	P	protein dephosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009719	P	response to endogenous stimulus
GO:0009725	P	response to hormone
GO:0009735	P	response to cytokinin
GO:0009736	P	cytokinin-activated signaling pathway
GO:0009755	P	hormone-mediated signaling pathway
GO:0009889	P	regulation of biosynthetic process
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0010468	P	regulation of gene expression
GO:0010556	P	regulation of macromolecule biosynthetic process
GO:0016311	P	dephosphorylation
GO:0016787	F	hydrolase activity
GO:0016788	F	hydrolase activity, acting on ester bonds
GO:0016791	F	phosphatase activity
GO:0019219	P	regulation of nucleobase-containing compound metabolic process
GO:0019222	P	regulation of metabolic process
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0070887	P	cellular response to chemical stimulus
GO:0031323	P	regulation of cellular metabolic process
GO:0031326	P	regulation of cellular biosynthetic process
GO:0032870	P	cellular response to hormone stimulus
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0042578	F	phosphoric ester hydrolase activity
GO:0043170	P	macromolecule metabolic process
GO:0043226	C	organelle
GO:0043227	C	membrane-bounded organelle
GO:0043229	C	intracellular organelle
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051171	P	regulation of nitrogen compound metabolic process
GO:0051252	P	regulation of RNA metabolic process
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0060255	P	regulation of macromolecule metabolic process
GO:0065007	P	biological regulation
GO:0071310	P	cellular response to organic substance
GO:0071368	P	cellular response to cytokinin stimulus
GO:0071495	P	cellular response to endogenous stimulus
GO:0071704	P	organic substance metabolic process
GO:0080090	P	regulation of primary metabolic process
GO:0101006	F	protein histidine phosphatase activity
GO:1901564	P	organonitrogen compound metabolic process
GO:1903506	P	regulation of nucleic acid-templated transcription
GO:2000112	P	regulation of cellular macromolecule biosynthetic process
GO:2001141	P	regulation of RNA biosynthetic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network