result

Gene information

Detail information of g358122

Location

Gene	Chr	Start	End	Strand
g358122	Scaffold_71633:HRSCAF_454719	42178	44721	+

Sequences

CDS

>g358122.t1
ATGAAAATGTTCTTCCATTTTTATTTCCTCTTCCTTTTATTCATCTCAGTTTTCATTTCATCATCGATTTCTGCAACCATTCAGTTGGGTTCAACTCTCACACCCAAATCGACGAACATTTGGTCTTCACCAAAAAACACTTTCTCCCTCTCTTTCGTCCCCGCTCCTCAAAATTCATCTGGTTTCATCCCTGCCATTATTTTCATCGGTGGCGTCCGGGTCTGGTCACCTCCGGGTAACATCACCGCCTCTTCCTCGGCTTCCTTCTCCCTGACCGCCTCCGGCAACCTTGTTCTCAACGCCTCCGGCGGTAACTCCGCCGTCTTATACCAGTCCTTCACCTCCAACAAAGGCGTGGCTTCTGCTGACTTGGATGAATCCGGTAACCTAAAGCTCACCACCCGCAACGGCACCGTCGTCTGGCAGTCTTACGACCATCCATCCGATACTATTCTACAAGGTCAGAATCTAACTTCTGCTCCTAACAATCCGACTTCTTTAAGATCTGGAAGTTACTCTTTTATCCTACAAAGTAATGGCAACATAACTTTGAAATTCAACGATAATATTGTGTACTACAACCAAGGTTTGAACTCTAGTTTCAGTAATAGCAGTCTTAGCTCGCCTGTTTTGACCTTGCAAACGAATGGAATCCTTTCCTTGATAGATAATAACTTGCCTAGTTCCATTAACATCGCTTACAGTAGCGACTACGGCGAGCTAGTTGACCTAAGATTCATGAGGTTAGATAGAGATGGAAATTTTAGGGCTTATAGTACGAACAAAGGTAACAATAGTCCAAATATGAAGTGGCAAATTGTAAATGATCAGTGTGAAGTTTTCGGTTGGTGTGGAAACATGGGAATTTGCACATACAACGACACATCTCCGACTTGTATATGTCCATCTCAAAATTTTGATGTCATCGATCCAAATGATAGCACCAAAGGATGTAAAAGGAAGGTCGAGATTCAAAACTGTGCTGGAAACTCAACTATGTTAGAGTTGAACAACACTCAGTTTTTGACTTACGCACCGGAGACGATGACTGAACAGTTCTTTGTAGGCATTACTGCATGTAGACAGAACTGTCTTTCTGGTCCTTCATGTGTTGCTTCTACTGCACTTGCTGATGGGTCTGGTCTATGTTACCTTAAAGTTTCGAACTTTGTCAGCGGATATCAGTCTTCTGCTCTTCCAAGTACTTCTTATGTGAAAGTATGTGGTCAGGGTATTCCTAATGCTCCGATTATGGATTCTGTACAACCTGGTTCTACTACTTCGAAACTTAAGGGTTGGGTCATTGCTGTTGTGGTTGTTGGTACGATTATTGGATTGATTTTGTTAGAGGGTGGGTTATGGTGTTTATTTTGCCAAAACAACCCGAAGTTTGGACCTTCTTTGGCACAATATGCTCTTCTAGAGTATGCCTCGGGTGCTCCTGTTCAATTTTCATATAAAGACTTGTATAGGTCAACAAAAGGTTTCAAAGAAAAGCTTGGGGAAGGAGGATTTGGAGCAGTGTACAGAGGAGTGCTTGCTAACCGAACAGTAGTAGCAGTTAAGCAATTAGAAGGCATTGAGCAAGGAGAGAAGCAGTTTCGCATGGAGGTCGCTACCATAAGCAGCACTCATCATTTGAATCTTGTTAGACTGATCGGTTTCTGTTCAGAAGGAAGACATAGATTGCTTGTCTACGAGTTCATGAAAAACAGTTCTTTAGACAGCTTCCTCTTCTCCTTAGAGCCATCTACAAAGCTAAATTGGTCAGCAAGGTTCAAAGTAGCTATAGGCACAGCTCGAGGGATAACCTACTTACATGAAGAGTGTAGAGATTGCATCGTGCATTGTGATATCAAACCTGAAAACATTCTTCTAGACGAAAACTTCAATGCAAAAGTTTCTGATTTCGGGCTTGCAAAGCTGATCAATCCTAAGGATCACAGGCATAGAACCATAACTAGTGTGAGAGGAACTCGAGGATACTTAGCTCCTGAATGGCTAGCCAATCTACCAATAACAACAAAGTCGGATGTTTACAGTTATGGAATGGTGCTGTTAGAAATTATAGGTGGGAAACGTAACTTCGACGTGTCTGAAGAAACTGAGAGGAAGAAGTTTTCGACGTGGGCTTATGAGCAATTTGAGAAAGGAAACATGGAAAATATTGCTGATAAGAAGCTTATAGAGTTGGACATTGACATGGATCAGTTTGAGAGAGCTGTTCAAGTGAGCTTTTGGTGCATACAAGAGCAACCTTCAAGTAGGCCTCCGATGAGTAAGGTAGTTCAAATGCTTGAAGGAATAATGGAAATAGAAAGACCTCCTGGGCCAAAACCCAATAATGATGGATCATCTGTTAGTGGCACTAGCGCTAGTGGGAGTATAAGTAATTTCTCAACTACAGGTACTGCTGTTACTTCACAAACGATTGCTTCTTCTTCTAGTTTTGTTAAGGCTGCTCCAAGCTCAGTATCAGAAGTTCACAGAAGTAGGTTGGAGAAGGCATATTCATCGCTTCTTGCTCCGAATCAATCAATATGA

Protein

Gene

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020263389.1	1.2e-308	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
Swissprot	Q9XID3.1	2.1e-249	G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300
trEMBL	A0A804HYM2	6.1e-302	Receptor-like serine/threonine-protein kinase

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G34300.1	56.46	0.0	874		lectin protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g358122	AT1G34300.1	797	328	13	25	817	25	806	56.46	0.0	874
g358122	AT2G19130.1	802	451	26	12	779	10	779	35.54	1e-117	421
g358122	AT4G32300.1	305	134	3	473	776	472	774	55.08	8e-102	368

Ortholog group

Species	Genes
Allium cepa	g358122.t1
Allium fistulosum	AfisC4G06317
Allium sativum	Asa5G05285.1
Arabidopsis thaliana	AT1G34300.1
Oryza sativa	LOC_Os03g62180.1; LOC_Os03g62180.2; LOC_Os03g62180.3

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF01453.21	B_lectin	Domain	83	159	51.3	8.6e-14
PF00954.17	S_locus_glycop	Domain	231	302	28.7	1.3e-06
PF08276.8	PAN_2	Domain	327	392	23.7	3.4e-05
PF00069.22	Pkinase	Domain	497	764	170.3	4.5e-50

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005515	F	protein binding
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005488	F	binding
GO:0005516	F	calmodulin binding
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network