result

Gene information

Detail information of g358762


Location
GeneChrStartEndStrand
g358762CHR2319916285319944009-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_009417723.10.0e+00PREDICTED: E3 ubiquitin-protein ligase KEG
SwissprotQ9FY48.20.0e+00RING-type E3 ubiquitin transferase KEG
trEMBLA0A804KJY10.0e+00RING-type E3 ubiquitin transferase

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score		gene aliasesShort description
AT5G13530.164.220.02115KEGprotein kinases;ubiquitin-protein ligases

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Ortholog group
SpeciesGenes
Allium cepag358762.t1
Allium fistulosumAfisC2G03067
Allium sativumAsa5G02556.1
Arabidopsis thalianaAT5G13530.1; AT5G13530.2
Oryza sativaLOC_Os05g32570.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF14634.3zf-RING_5Domain6911528.88e-07
PF07714.14Pkinase_TyrDomain40269584.27.7e-24
PF12796.4Ank_2Repeat76784340.23.6e-10
PF13637.3Ank_4Domain84789334.02.8e-08
PF12796.4Ank_2Repeat966105138.61.1e-09

Gene Ontology
AccessionOntologyName
GO:0005515Fprotein binding
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0001101Presponse to acid chemical
GO:0008152Pmetabolic process
GO:0003674Fmolecular_function
GO:0006952Pdefense response
GO:0003824Fcatalytic activity
GO:0016192Pvesicle-mediated transport
GO:0046903Psecretion
GO:0004672Fprotein kinase activity
GO:0004674Fprotein serine/threonine kinase activity
GO:0004842Fubiquitin-protein transferase activity
GO:0007165Psignal transduction
GO:0005488Fbinding
GO:0016567Pprotein ubiquitination
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0005768Cendosome
GO:0005769Cearly endosome
GO:0043231Cintracellular membrane-bounded organelle
GO:0005794CGolgi apparatus
GO:0005802Ctrans-Golgi network
GO:0006464Pcellular protein modification process
GO:0006468Pprotein phosphorylation
GO:0006793Pphosphorus metabolic process
GO:0006796Pphosphate-containing compound metabolic process
GO:0006807Pnitrogen compound metabolic process
GO:0006810Ptransport
GO:0006950Presponse to stress
GO:0007034Pvacuolar transport
GO:0040007Pgrowth
GO:0007154Pcell communication
GO:0008150Pbiological_process
GO:0009719Presponse to endogenous stimulus
GO:0009725Presponse to hormone
GO:0009737Presponse to abscisic acid
GO:0009738Pabscisic acid-activated signaling pathway
GO:0009755Phormone-mediated signaling pathway
GO:0009787Pregulation of abscisic acid-activated signaling pathway
GO:0009788Pnegative regulation of abscisic acid-activated signaling pathway
GO:0009966Pregulation of signal transduction
GO:0009968Pnegative regulation of signal transduction
GO:0009987Pcellular process
GO:0010033Presponse to organic substance
GO:0010646Pregulation of cell communication
GO:0010648Pnegative regulation of cell communication
GO:0012505Cendomembrane system
GO:0016197Pendosomal transport
GO:0016301Fkinase activity
GO:0016310Pphosphorylation
GO:0016740Ftransferase activity
GO:0016772Ftransferase activity, transferring phosphorus-containing groups
GO:0016773Fphosphotransferase activity, alcohol group as acceptor
GO:0019538Pprotein metabolic process
GO:0019787Fubiquitin-like protein transferase activity
GO:0023052Psignaling
GO:0070887Pcellular response to chemical stimulus
GO:0023051Pregulation of signaling
GO:0023057Pnegative regulation of signaling
GO:0031410Ccytoplasmic vesicle
GO:0031982Cvesicle
GO:0031984Corganelle subcompartment
GO:0032446Pprotein modification by small protein conjugation
GO:0032502Pdevelopmental process
GO:0032870Pcellular response to hormone stimulus
GO:0032940Psecretion by cell
GO:0033993Presponse to lipid
GO:0036211Pprotein modification process
GO:0042221Presponse to chemical
GO:0043170Pmacromolecule metabolic process
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0043412Pmacromolecule modification
GO:0043621Fprotein self-association
GO:0044237Pcellular metabolic process
GO:0044238Pprimary metabolic process
GO:0044260Pcellular macromolecule metabolic process
GO:0044267Pcellular protein metabolic process
GO:0044422Corganelle part
GO:0044424Cintracellular part
GO:0044431CGolgi apparatus part
GO:0044444Ccytoplasmic part
GO:0044446Cintracellular organelle part
GO:0044464Ccell part
GO:0045324Plate endosome to vacuole transport
GO:0046907Pintracellular transport
GO:0048519Pnegative regulation of biological process
GO:0048523Pnegative regulation of cellular process
GO:0048583Pregulation of response to stimulus
GO:0048585Pnegative regulation of response to stimulus
GO:0048589Pdevelopmental growth
GO:0050789Pregulation of biological process
GO:0050794Pregulation of cellular process
GO:0050896Presponse to stimulus
GO:0051179Plocalization
GO:0051234Pestablishment of localization
GO:0051641Pcellular localization
GO:0051649Pestablishment of localization in cell
GO:0051716Pcellular response to stimulus
GO:0065007Pbiological regulation
GO:0070647Pprotein modification by small protein conjugation or removal
GO:0071215Pcellular response to abscisic acid stimulus
GO:0071229Pcellular response to acid chemical
GO:0071310Pcellular response to organic substance
GO:0071396Pcellular response to lipid
GO:0071495Pcellular response to endogenous stimulus
GO:0071704Porganic substance metabolic process
GO:0097305Presponse to alcohol
GO:0097306Pcellular response to alcohol
GO:0097708Cintracellular vesicle
GO:0098791CGolgi subcompartment
GO:1901419Pregulation of response to alcohol
GO:1901420Pnegative regulation of response to alcohol
GO:1901564Porganonitrogen compound metabolic process
GO:1901700Presponse to oxygen-containing compound
GO:1901701Pcellular response to oxygen-containing compound
GO:0140096
GO:1905957
GO:1905958

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K16279KEG; E3 ubiquitin-protein ligase KEGEC:2.7.11.1 2.3.2.27 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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