result

Gene information

Detail information of g359049

Location

Gene	Chr	Start	End	Strand
g359049	Scaffold_71778:HRSCAF_454864	30538	32199	-

Sequences

CDS

>g359049.t1
ATGGATCACCAACCTATCTCCACGGACTCCACCTTCTTTCTGTTCGCGCTGCCGACCCTCATCTCCTCTCAACTCTTCACACCTACCCAACTCTTCTTTCTCATCGCCGTCTCCCTACTTTCCGTCACGCTCCTCACCTGGGCCCTCTCCTCAGCCGGCCCCGCATGGCCGCACAACCGTTCCCGCCTCGGTCCAACTCCCATTCCCGGCGTCCGTGGCCTTCCACTCCTCGGTTCGCTCCTCTCCCTCACCTGCTCCCTCCCTCATCGCACCCTCGCTCGCCTCTCCCAGGCAGCCCGTGCCCATCAACTCCTCGCCTTCTCCGTTGGCTCCACCCCGACCGTAGTTTCGACCGACGTATCAACATCCAAAGAAATACTCACACATCCCAACTTTTCCGACCGGCCCATCAAGTTCTCTGCCCGTGAGCTCATGTTCCACCGGGCCATGGGCTTTGCCCCTAACGGTGTATACTGGCGTCTTCTACGCCGCATAGCTTCATCTCACCTGTTCGCCCCTAGAAGGATTGCGGCCCATGAGCCCTCCCGCCAGCTCGATGCGGAACTAATGCTGCATAGGATCACCACCGAAATGTCCCTTTCGGGCCGAGTCATGGTCCGGCCCCATCTACAAACCGCGGCGCTGAACAACGTGATGGGAAGCGTGTTCGGGATCAGGTACGAAGACGTGGTGGATGCCGATTCGTTAAAAGAGATGGTGCGGGAAGGGTTCGAGTTGCTTGGCGCATTCAACTGGTGCGATCACTTGCCGTGGCTTTCAGGATTCTTCGATCCAGGAAATGTGAAGATGAGGTGCGCTGTCCTTGTTCCACGTGTCAAACAGTTCGTGCAGGGAATCATCGACGAACATAGGGTTAGAAGGATCAAAGGCGGTAACATTCAAGATGGTAATGCGGATTTCGTAGATGTGCTGTTGAATTTGGAAGGTGAAGAAAAACTCGGCGATGACGATATGATTGCTGTGTTATGGGAAATGATATTTAGAGGAACAGACACAACGGCGCTACTGACGGAGTGGGCGTTGGCAGAGCTAGTTATAAATCCAGACGTGCAGACCAAACTGTACAACGAAATAGCAGCTGCCGTCGGTCCCGGAGTTGAGGTTGCAGATGCTGACGTGGCAAGAATGCCTTACTTGCAGGCTGTGATAAAGGAAACACTGAGAGCCCACCCGCCCGGCCCGCTTCTGTCATGGGCCAGGCTGTCAACTGACGATGTTAAGCTCAGCAATGGGATGGTGGTGCCGGCTGGGACGACGGCGATGGTGAACATGTGGGGAATTACTCACGACGAGAAGGTTTGGGCGAGGCCGGATGTGTTCGATCCGGAAAGGTTTATAGGTGCAGACGTGGACGTACGTGGGTGTGATTTGAGGTTGGCGCCCTTTGGTGCAGGTAGGAGAGTTTGTCCTGGGAAGAATTTGGGGCTGGTGACCGTTGGGCTGTGGATAGCCAAATTGGTAAGGAAGTTCAAGTGGGAAGAGACCGCGGAAGGTGTTGATCTGAGTGAGTTGCTTAAGCTATCTTGTGAGATGAAGAATCCTCTTGTTGCTAGAACCTGTGTCAGATATTAA

Protein

Gene

>g359049.t1
ATGGATCACCAACCTATCTCCACGGACTCCACCTTCTTTCTGTTCGCGCTGCCGACCCTCATCTCCTCTCAACTCTTCACACCTACCCAACTCTTCTTTCTCATCGCCGTCTCCCTACTTTCCGTCACGCTCCTCACCTGGGCCCTCTCCTCAGCCGGCCCCGCATGGCCGCACAACCGTTCCCGCCTCGGTCCAACTCCCATTCCCGGCGTCCGTGGCCTTCCACTCCTCGGTTCGCTCCTCTCCCTCACCTGCTCCCTCCCTCATCGCACCCTCGCTCGCCTCTCCCAGGCAGCCCGTGCCCATCAACTCCTCGCCTTCTCCGTTGGCTCCACCCCGACCGTAGTTTCGACCGACGTATCAACATCCAAAGAAATACTCACACATCCCAACTTTTCCGACCGGCCCATCAAGTTCTCTGCCCGTGAGCTCATGTTCCACCGGGCCATGGGCTTTGCCCCTAACGGTGTATACTGGCGTCTTCTACGCCGCATAGCTTCATCTCACCTGTTCGCCCCTAGAAGGATTGCGGCCCATGAGCCCTCCCGCCAGCTCGATGCGGAACTAATGCTGCATAGGATCACCACCGAAATGTCCCTTTCGGGCCGAGTCATGGTCCGGCCCCATCTACAAACCGCGGCGCTGAACAACGTGATGGGAAGCGTGTTCGGGATCAGGTACGAAGACGTGGTGGATGCCGATTCGTTAAAAGAGATGGTGCGGGAAGGGTTCGAGTTGCTTGGCGCATTCAACTGGTGCGATCACTTGCCGTGGCTTTCAGGATTCTTCGATCCAGGAAATGTGAAGATGAGGTGCGCTGTCCTTGTTCCACGTGTCAAACAGTTCGTGCAGGGAATCATCGACGAACATAGGGTTAGAAGGATCAAAGGCGGTAACATTCAAGATGGTAATGCGGATTTCGTAGATGTGCTGTTGAATTTGGAAGGTGAAGAAAAACTCGGCGATGACGATATGATTGCTGTGTTATGGGTAATTTTCATTTACCACCTTTTCTTATAACCTAATTTTATTACTAATTAACCAGTTGAGTTAATACAGGAAATGATATTTAGAGGAACAGACACAACGGCGCTACTGACGGAGTGGGCGTTGGCAGAGCTAGTTATAAATCCAGACGTGCAGACCAAACTGTACAACGAAATAGCAGCTGCCGTCGGTCCCGGAGTTGAGGTTGCAGATGCTGACGTGGCAAGAATGCCTTACTTGCAGGCTGTGATAAAGGAAACACTGAGAGCCCACCCGCCCGGCCCGCTTCTGTCATGGGCCAGGCTGTCAACTGACGATGTTAAGCTCAGCAATGGGATGGTGGTGCCGGCTGGGACGACGGCGATGGTGAACATGTGGGGAATTACTCACGACGAGAAGGTTTGGGCGAGGCCGGATGTGTTCGATCCGGAAAGGTTTATAGGTGCAGACGTGGACGTACGTGGGTGTGATTTGAGGTTGGCGCCCTTTGGTGCAGGTAGGAGAGTTTGTCCTGGGAAGAATTTGGGGCTGGTGACCGTTGGGCTGTGGATAGCCAAATTGGTAAGGAAGTTCAAGTGGGAAGAGACCGCGGAAGGTGTTGATCTGAGTGAGTTGCTTAAGCTATCTTGTGAGATGAAGAATCCTCTTGTTGCTAGAACCTGTGTCAGATATTAA

Functional annotation

Database	accession number	e-value	annotation
nr	NP_001106069.2	1.5e-192	cytochrome P450 78A1
Swissprot	Q7Y1V5.2	1.3e-183	Protein PLASTOCHRON1
trEMBL	A0A1D6KVT1	1.1e-192	Cytochrome P450 CYP78A1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G09970.1	58.94	1e-180	629	CYP78A7	cytochrome P450, family 78, subfamily A, polypeptide 7

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g359049	AT5G09970.1	526	205	6	7	524	8	530	58.94	1e-180	629
g359049	AT1G13710.1	500	227	9	36	529	23	512	51.40	8e-137	484
g359049	AT2G46660.1	528	243	11	13	525	9	524	48.86	3e-135	479

Ortholog group

Species	Genes
Allium cepa	g359049.t1
Allium fistulosum	AfisC4G02200
Allium sativum	Asa0G00209.1; Asa0G05879.1; Asa4G02264.1; Asa4G02341.1; Asa5G02980.1; Asa5G02981.1; Asa5G02984.1
Arabidopsis thaliana	AT5G09970.1
Oryza sativa	LOC_Os10g26340.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00067.19	p450	Domain	69	502	267.6	1.7e-79

Gene Ontology

Accession	Ontology	Name
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004497	F	monooxygenase activity
GO:0055114	P	oxidation-reduction process
GO:0016491	F	oxidoreductase activity
GO:0008150	P	biological_process
GO:0009058	P	biosynthetic process
GO:0016705	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016709	F	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
GO:0019748	P	secondary metabolic process
GO:0022603	P	regulation of anatomical structure morphogenesis
GO:0040034	P	regulation of development, heterochronic
GO:0044550	P	secondary metabolite biosynthetic process
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0065007	P	biological regulation
GO:0090709
GO:1905428

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K20619	CYP78A; cytochrome P450 family 78 subfamily A	EC:-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network