result

Gene information

Detail information of g364478

Location

Gene	Chr	Start	End	Strand
g364478	Scaffold_72399:HRSCAF_455485	51992	54116	-

Sequences

CDS

>g364478.t1
ATGGAACTAACTCCTGGTATGTCTGCTCTAGTCACTGGAGGAGCTAATGGAATAGGCAAAGCTATCGGCCTGGCTCTTGCCAAAAATGGTCTCTTTGTAACTGTTGTTGATTTTTCCAAAGAGAGAGGAACTGAAACTGCTTCCTTGTTAGAAAAAGAGAACAAAAAGTTCTATCCTGACATAGATCATCCTTCTGCAATGTTCATCAAATGTGATGTTACTAATACTGGTGAAGTATCTGCTGCATTTGAGAAGCATGTAGAGATATACGGAGGTCTAGACATTTGTGTAAACAGTGCAGGAGTTGGTACTACAGTAAAACGCTTTGATGAAGATGTATCTGATGGCATTAATACATGGAGACGGATCATCAGTATAAACTTTGTTGCTGTTATTGACTGCACTAGAATTGCGATTCAAACAATGCGGAAAACTAAGAAGCCTGGGGTAATTATCAATCTTGGGTCAGCATCCGGTCTTTACCCAATGTGTGTTGATCCAATCTATTCAGCCAGTAAAGGTGGGGTTGTTCTATTTACTAGATCATGCAGTACATTAAGTCGTGAAGGGATCCGTGTTAATGTCCTTTGTCCTGAGTTCGTGGATACCGGCATAATATCAGAGAACAATTTGGCAGACGTTAAAACGGTTGGTGGGTATTTGCCTATGAAGACGGTTGTAGAAGGTGCATTTGAACTTATAAAAGATGAGAGCAAAGCCGGAGCATGTTTATGGATCACTAACCGTAGAGGCACAGAATACTGGCCTACTCCTGAAGAAGAGAACAAAATATGGAGCAATTTAGTAACAAAATGGCATGGGAAAGTATGCACAGAGCTTCCAACGACAAAACCTGATCAAGCATGGTCGCTACTAAAAGACTTTTGCAACCTCCATAAATATCTACCTTCACTGTCTGTCTGTGAAAAAGTAGAGGGTGAGAATGAAATTCCAGGCTGTGTACGATATTGTGCAGGTACAATGCAACCAAGTGGAGTGAACTTCTGGGCTAAGGAGAAGTTGATATCATTTGATAATACAAATAGGAGCTATAGCTATGAGGTAACGGAGAGTGGCATAGGGGTTGAAGGGTATGTTGCAACGTTACAAGTAGTCGAGGGAGGTGTTGATAATAATGATGGATGTAAGATTGAGTGGTCTTTTGAGTTCAAACCTCTAGAAGGTTTCAGCGAGGCGGGTTATATTGAAATTTTGCAACACTGGATTAAGGAAATGGCTAAGAAAGTTGAAGATGGTTTAGTAATGAATGGCCATTGA

Protein

Gene

>g364478.t1
ATGGAACTAACTCCTGGTATGTCTGCTCTAGTCACTGGAGGAGCTAATGGAATAGGTAACAGTTGCTATCATAATATAATCCAGTTCATTGTATGTATAGCTTGTTTAAAGTAAATATATGCTACAACAATACGCTTACTTTAAAACATACTGCAATACATATACTTGCTTGACATTTACTTCTGTTTCAGGCAAAGCTATCGGCCTGGCTCTTGCCAAAAATGGTCTCTTTGTAACTGTTGTTGATTTTTCCAAAGAGAGAGGAACTGAAACTGCTTCCTTGTTAGAAAAAGAGAACAAAAAGTTCTATCCTGACATAGATCATCCTTCTGCAATGTTCATCAAATGTGATGTTACTAATACTGGTATATAACCATGCATGCGACATGTAACTTAATATTGTACTATGTATAAGATTTCACTGTTACATATGACAAGAAACTTTGGATCCATTTTGCGTAGGTGAAGTATCTGCTGCATTTGAGAAGCATGTAGAGATATACGGAGGTCTAGACATTTGTGTAAACAGTGCAGGAGTTGGTACTACAGTAAAACGCTTTGATGAAGATGTATCTGATGGCATTAATACATGGAGACGGATCATCAGTATAAACTTTGTTGCTGTTATTGACTGCACTAGAATTGCGGTAAAAATGATTATTTCAGTCAATACGGATAAAGTTTAGCAACTACTGCAAGATAAACAATTTTGCAGAATTTCACGCTAATTTTAGTTACTATTTTGCAGATTCAAACAATGCGGAAAACTAAGAAGCCTGGGGTAATTATCAATCTTGGGTCAGCATCCGGTCTTTACCCAATGTGTGTTGATCCAATCTATTCAGCCAGTAAAGGTATGAATTAGATGAACTCCTATTTGTAAATAAGCATTTGGTAATTTGAAGTAATTTTTATTTTTAAAATGATGCGAATAAATGTGTAGAGAGCTCAGAACAGAAACTCTGAGATACATGTATGAATGTCATACTTTAGAATAACATATACATAGCAGTCATTGAAATTTATATAATTGTGTATGTAAACAATAGGCGAATATCATTGTAAAGCATGGAGTTTAGAACTGATTACATGCGGAAAACGAACTGTTTTTCATTCGTTTATTTGCAGGTGGGGTTGTTCTATTTACTAGATCATGCAGTACATTAAGTCGTGAAGGGATCCGTGTTAATGTCCTTTGTCCTGAGGTATAATTTGATATGATTTATGATTTTTTTTCTTCTTCTTTTCAGAGCTAAATAACCTTGTCTTAGTAAAAATATGCACGTAGATGACTCAATAAATAATATGCTGACTTCATACAGTTCGTGGATACCGGCATAATATCAGAGAACAATTTGGCAGACGTTAAAACGGTTGGTGGGTATTTGCCTATGAAGACGGTTGTAGAAGGTACAAATCACAGCTAAACTAATGATTTAATGATAGGAAGATAATATAAACCAAAAGGGACAAATATTTTGTTTATCTATGGCTTTCCTTAATACCTCGCATGCTACATCTATATATTTCAGGTGCATTTGAACTTATAAAAGATGAGAGCAAAGCCGGAGCATGTTTATGGATCACTAACCGTAGAGGCACAGAATACTGGCCTACTCCTGAAGAAGAGAACAAAATATGGAGCAATTTAGTAACAAAATGGCATGGGAAAGTATGCACAGAGCTTCCAACGACAAAACCTGATCAAGCATGGTCGCTACTAAAAGACTTTTGCAACCTCCATAAATATCTACCTTCACTGTCTGTCTGTGAAAAAGTAGAGGGTGAGAATGAAATTCCAGGCTGTGTACGATATTGTGCAGGTACAATGCAACCAAGTGGAGTGAACTTCTGGGCTAAGGAGAAGTTGATATCATTTGATAATACAAATAGGAGCTATAGCTATGAGGTAACGGAGAGTGGCATAGGGGTTGAAGGGTATGTTGCAACGTTACAAGTAGTCGAGGGAGGTGTTGATAATAATGATGGATGTAAGATTGAGTGGTCTTTTGAGTTCAAACCTCTAGAAGGTTTCAGCGAGGCGGGTTATATTGAAATTTTGCAACACTGGATTAAGGAAATGGCTAAGAAAGTTGAAGATGGTTTAGTAATGAATGGCCATTGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK67273.1	2.0e-102	uncharacterized protein A4U43_C06F18430
Swissprot	P59082.1	4.9e-45	Lachrymatory-factor synthase
trEMBL	A0A5P1ENN6	1.5e-102	Enoyl reductase (ER) domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G49670.1	57.79	4e-93	338	NQR	ARP protein (REF)

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g364478	AT1G49670.2	263	110	1	1	263	1	262	57.79	3e-93	338
g364478	AT1G49670.1	263	110	1	1	263	1	262	57.79	4e-93	338
g364478	AT2G25770.2	152	86	3	271	418	9	157	38.82	1e-26	117

Ortholog group

Species	Genes
Allium cepa	g364478.t1; g468157.t1
Allium fistulosum	AfisC8G01480
Allium sativum	Asa1G03601.1; Asa1G03607.1
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00106.22	adh_short	Domain	9	209	143.6	4.6e-42
PF10604.6	Polyketide_cyc2	Family	283	402	71.1	1e-19

Gene Ontology

Accession	Ontology	Name
-	-	-

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00069	HPGD; 15-hydroxyprostaglandin dehydrogenase (NAD)	EC:1.1.1.141	-	-
K07119	PTGR3, ZADH2; prostaglandin reductase 3	EC:1.3.1.48	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network