result

Gene information

Detail information of g366430

Location

Gene	Chr	Start	End	Strand
g366430	Scaffold_72651:HRSCAF_455737	465078	472737	+

Sequences

CDS

Protein

Gene

>g366430.t1
ATGTGTGGACTCTTAAAACAAAGACAAGACAACGTCATCAGCGAGTCAAATTTTGAATCGGTCCACGTGTCAGTAAACTATTTTCCATTTAATATTAATTTTGTATTATCTATTAAGCCGTCGCTTCACCACCCTTCCATCTTAAAAGTCAACAATTCCTCACAACTTTCTTCCTCTCTTCTTCCCAATTATTTTTCCATCAAAATCTCTCTGATTCTATTGCTCTGGCTAACTTGCGCGCACCTTTTGATTTTCAAGAAACGACGTTCCTTTTGGTAACTTATTTTCTCGGTTTTGATTACGATTCCTATTGTGCATTAAGTAACCTGTTTTGAATTTTAAATTAATCGGATTTTGTTCATAACTTAGGCTCGTTGATACGTTTTTAGAAATTGGACTGGAGAGGAATGCGCTAACTCACACCAATATTTGACCCTATTCTTCGATGTGAATTTCATATTCATTTTGATATATTTGTGCTCTCTCCCTAATTCCTAAACTTGTAGTTGAATGCTTAAATTAATTTATTTGGTACTATGTTTGTGTACTTTAGATAACTCTGAGTTGGGCGAGTAAAAAAATGTGATCCATTTTTTATGTACAAGAAAAGTTCAAAATCATGGATACAATGCACATAAAGTACACACAGTTTGGCCTGTAAAATTCAGCAATATTGAATTTATGTCACTTTTATCCGAACATTGACTCTCTCGTATCTTATTTCAGTAACTTGGTTACAGGAGTGTAATTCTTGTTATAACCGCAATGCTGTAGTTTAAGAGAATGGGGGAAAATAATCTTGTGTTTATTTTGCTAGATTTGAATTTTTTTGTAATGGCAGTGTTTCATTTAGCTAAGAATATCCCTTAATTCGAATGTTGATCAGTGTTATGCTTCGATATCATGGCTGATCATAAAACATGTGCTTCCCAAGTTCAGCTTTACTATCTATAATGTGGAACTTACATAAAAAACATGTAGAATCAGTGTTATCAAAATAAACCAAAAGATAATTCTCACAAACACCTAGTACATAATTCATTAACAGGCATGTTTCACAGATCAAAAACAAAAATAACAATTCAACATGGAGTAAATTTGAATAAAATATACTTGGTTCATTGTTAGAATATGCTCACCCTACGGTCAAAAATTTAGTTGATTGTTTCAGTTAAGAAATTTTTGGCATGTTGGATGTATGTAAACATTGTGAATCGCATATGATAAATGCATATGATATCTATTAAATAATAGTAAAGCAGAAGAAATTCAGACTCTCTTATTAATTGTAGTAGCTTTCTCTACTCTCCTTAATTCTCTCTCTAGATATTTTCTTTTAAATTTTTATGATTTATTACTTTTATTCTACTAAACTTCTAATGCCAAATTATAATCAAATATATACTTTTGCAATTTTCTATAATTATTCAAAAATGCCTTCTTAGTTCTCTTCTAATATTTTACATTTAAGTGCACACATTTAAATAAATTACATAATTTAAAATTTAAACCATTCGGTAAACTCAACTAACGAATATTCGATATGTCCTGTGAATCCTAAAATATGAACAATTTCGATAGTATACCATAATAGCATCAAAAAACAATTAAAACAAAATTTTCATTTGCATACAAAGATATGTAAATCACATAACATAAATTATATACACCAACAATAATAACAAATTTATTTTATATTTTGTTTATATCAATGAAGTTATCGTTCATTACACTGAAAAATTATATTTTTAGCTTTAAACGCTTATATTTTAAATTCCCATAGTTACTTACAAACCAATTCTCAATTCCCTCCTACTATTTTTTACTCAATTCCATGTATTTAAATAATTATATCATGTTTATTTTAAATCATTCAGATAAATATAATTAACTAATATTTATTAATTCATCTAATCAATCTTCAAATATGCCGATTAAGCATGTATACAACATTCACATATATAAGCGAAGATGATAAAATTATAATTTTTATTCATACACACACTCACACACACACACACACGCAGATATATATATATATATATATAGATATAAAGATATATGAATCACGTAACATAAAATATAAACACAAACGATGATATATTTTTTAATTTATAATTCATTTATTTCAAATAAATATTATACATCGCATTACAATTTTTTTTACAACTTTTAAAGGATGAATTTATATTTTACAACATGAGTGTGGAAGCACAGATTAATCTAATAAAAATTAGATTATGTAGACATTCTCATTTTCAACGTGACATTAAAACTTACCCAGTGCATAACTCGAACTAACGTTACATTTTTTTTTATGAATATTGAAGTTGTAAACATGACACTCTTACAACAACGTGAAATTTATGATTAACTACAAAGTTTAAAAAGTTTACTAATTGAAATCTCAGATAATGAATAAAAGTTCGTGTGCATATAAGTTGATGTAAGATGTTTTTCTCAACTACATTACATACAAAGCTCTTCTCATTTTTCTCTACTTTCTAAATTCAGCTTCATATATTTAATTAGTTAAGTTGATCATTGATTTACAATATTTAAATATATTCAATTATGTAATATTCCTTATTTTATTATAAATCCTTAAAAATGTATATACAATATTCTTTTTAATATAAATGGAAAATTCATTTTCTTATATACATAAAATACACGTATCACATAGCATTAACTATTTACATATATAGCAATAGCATATTATACACACACACACACAAACATACGTATATATATATATATATATAGTGTTTGTTATTACCGAGTTAGGACAATAACTCCGATAAGAATATGTGGTTAGCGACCCTCTACCTTTTATATGAGTGTTACATGCATTTTTAATTATAAATTACTTTATTTTAATAAATTTATCGCATACTACTTTAAAAAAAATTAGTTTTTAACAATAATTAAATTTTAAAGACAATTTTTTAACAACTTTATCGTGTGCAACGCACGGGTTACATACTAGTTCCTATAATTGCATGAATTATATGTCCTCTCCATTCAAACCATCAATTGCATATTACCAATGGATTTCTGATAGTTCTATGCATACCTAATTTGCACGGAATATTATTGTGCCCAACATTCTAAATAACTAAACAATAGCTATATTTCTAGAATACTTCATATATGCTAAACACGACTTTTGTTGGATTTAGTTCTCTGGATCGCTATTAGGCTTTGTGTGTGTAGGCATGCATGTGTGCACGCGTGTGTACGCACACACACATACACACACAGCGACACCTCTCTTTTGTAGCACCTCCTTAGCACTCCTACTTTCCACCACAGGTTTTAATTAAATAATAGTATGATGTGGAAGAGAGAAACAACAAATATTTATGCAATAGCAGGTTGTGGAAAGCAAAGGTGCTTACAAAAGAGGGGTGAATTTGAACCTTGTGCACGCGCGTGTAATGTGGTTGTTAAGCATTTTCGTCAGTGATATAGGTTTGGTGGAGTGGTTAAGTTAGTTGAGTCGAGTAATGTCCTCCTTTACATATGGCCTATAGTCAATATGAAAAAACATTGGATCCATTAAGTGTGCTAACACATAACATAGTATTTTATTTTACTCTAAATTTGGTACATATAAACCAACTCCTTCATCCAAGCAACATATGGATTTGGGTCCATTAGCTGAATCATGTTGTCATCTTGAACTTAGTAAACACGTGAATGAAAGAAGCATACAGACATGCATATAAATGTGGAATACTGTTGTTATTTTCTTTTTCTAAGCAAATGATTTTTACCTCATACATAACAACCAAATCTTTAGCAGGTGCCCATCTCATTTTTACAAGTCATCAGACAGTATAAAAGTCCAGTTTCGTGTAATTGACAAAACATGTCCTGTTTCTTTTGCAAATTCAAGGGTCCAAAAACTTCAAAGCAGAAATGCAATCAAAATAATACAGGTGTATGTCTATCTATTTGTAAAATATTTATATTTATCGTTTTCAGTGAAAGCCAATGATAAACCGTTTTTCATTTAGATATTTCTAGCACACAAAGTGTAAGGGTATTCTTATACAAAGAATTGAAGAAAGCTACAAATGACTTTAGTGCTGGTAACATAGTTGGAAAAGGCGGTTTTGGATCCGTTTACAAGGTTTACATATACTATTGCCTACAATACCGACAATAATGAGTTTATCTTTTAGTAAATAAATAGATAATTCTTGTGTAGGGTATACTTAATGATGGTACAGCTGTTGCTGTAAAGGTGCTTTCGCAAGAATCAAAACAAGGAACACGAGAATTCATTTCCGAGCTTACTGTAGTGACTGGCATTGTACATGAGAATTTAGTTACACTGTATGGTTGTTGTGTGGAAGGAACTCAAAGGATTCTAGTGTACAATTATCTTGAGAACAACAGTGTTGCACAAACACTTCTAGGTATGTTTTGCAAATTTTGGCTTCATGTTTATCATCATAACTGAGTCATAATACATCATGCATTACAAGCCACTGTTATGGGTGAACATATTTGCATGAATGTATTTATATTTACATTCGGTTTTTAGCCTGTATCAAAATTTGAAATCAGGAGGTAACTTGTCCACAAATGTATTTTCTTCTCAATATCCTATGGAGAACATTTTCTAATAATTAGGGCTGTCCAAGGCAGTGGAATATTCTGACTACACCCTACCACTACTATTTACTAATGCAATTTATATATACATAAATGCATACAAGTATGTGTATATGTGTATCAGTGTATGCATGTAAGAGGGATCCGTAGCCACTCCATAGCCTCTTCTGTATTTTTGCATCAAATGTGAAACTCAAATATTTTTGTAAGTACCATTTATTTGTTGTCGGGATCATCTTTGAAGAAATTGGAACATTCTGAAATTTATCTCTTTCAAAATCATAAAACAAATTGAAATTTTAGTTTAGAATTTTCCTCAAAACCACCTGAATTTTGCATTGTTGGATAGCCCTTTAAATAAATAAAAACTCTCTGAGTCTCACCCATTGATGAATCTCATCTCATGTGTATATCATTATACATGCTTCCATGTAATATTTATGTAAGAGTGAAGGTTTTAAAGAAGCAAGGGGTAAATTGCTATAACTTGCTTATTTACGATCTGTTTGAATCGACTTAAATAAGCTATTTTTGGACTTTTTGAAAACCAAAATGAATTGGTTTTGGCTTTCAAAAAACAAAAAAATAGCTAGGCCTATAAACGGTCGGATGCGGATTCAAATAGTGTCATACCCGTATCAGTATCCGAAATTTCGATATTGGATACACGTATCCGTGGATGCGGACGGATATTGGATATTCTTCGATTAGATTCACAAATAATAAACATAAATTAATAAATAGAAAATTTTGATTTATTACGAATCCATTTCAGTACTAAAAATATAAAAAATAATAAATATGCTAAGGAAAATAATTTTAAGTAACAAATATTGATTTTTATACATACTAAACTTTCTTTTACCCGGATAAAATAATAAATGACAATCATTTTATGTACTAAAAGTTTAAAATACACAAAAAACAATTATAATTTTGATAAAAACTAAATGGATAATTATTGGATTCTGATATGGCCATATCCGCATTTGTAACAATTTTTTGGATATCGGATAATTTTTCATATTTTGGATATGGATATAAACGGATTTTAGATTTTTCGAGTACTCAATGACGGCCCTAAAAGTAGTTTAAGTCCATCCAAACGGACTGTTAATTGGAACTAATGCCTTCAACTTCTATCTCGTTGTAAACAGATATTTACCCACGTAGCTTCTAATGCAGATGTTCATAGGAGTAGATGAATTGTACCCTTTTTTGTACATGTTAATCTTTCTAACATTCCACACACTTGCCTTTTATAGGTTCAAAAAGAAGTAATATTCAGTTCAGTTGGAAGACACGAGCTAAAATTATAATAGGAATTGCTCGTGGTCTTGAATTTCTTCATGACCATGTGCAGCCTCATATTGTACATCGAGATATCAAAGCGAGTAATATTCTTCTTGACAGCGATCTCACTCCAAAGATTTCAGATTTTGGTCTGGCAAAACTGTTGCCCTTGGATACAAGTTATGTCAGCACTCGTGTTGCTGGAACCATGTAAGTTTATATTCGCTTCTTGTTAGGTGCAACCATATGAAGGTTTAAAACATTCGAATTTGCCATTCTATTGCTAAGTTGGTGTTAATTTACATCCAAATGAACTAAATATTATGTCTTATGATATGTTCTATTTTACTTAACCATTCTGTTTATCAATGGTTGTCTTTAAAACTTTTTTCTTCTTTTTCTTGAACAGAGGTTACTTAGCTCCGGAGTATGCAGCACGTGGTCAGGTTACACGAAAATCAGACGTCTACAGCTTTGGTGTTCTCTTATTGGAGATTGTAACTGGAAGATCTAATGCCGACACAAGGCTACCTTATGAAGAGCAACTTTTCCTTGATTATGTAAGAGTATGACTATTGTTTAACTATTGTTTACTTTTCAGACATATTTTTCTTCAATAGATGGCACAACTTTGGTTCCTTTGAGTGTCAGCATTTTATTTTAACAAGGCTATGATGAGTGCCTATTAAACTGCCCTGGTGGAAGATTTTGACTTTATGGGATAGTTAATTTCTAGTCGACAAACAAATTGTTACCTTTATGCAATAAGAATTTGATTTGTAGAAGTACATGCCTAACATAAATTTGCTATTCAATTTTCAGCTAACAGTCGTCAGTTCTATTTCATTTTTAAGGATATTTCGCTATGTCTGGACACATCTTCCTTTTCTTATGACTGCAATTGGCTACACTTGTACCCTACAAAATAACATAATTAGATTCCCATGTATAATGGAAAATGATACTAATATCTCTATCCTTCATTGTCGTAACCAATTGTCAAGCAACTGATTTCTTAATATATTATGTTCGTTCACTTCTTTGCCAAAACCTAAATCTTGGTAGCGGAGTTTTTGCCAGGGTTTACAAAGCTAAATAATGTCTAGAAATATAACTGAAAATCCATGAACATTGTTATATAAATGATACTCTGAAAAATAAGAGTTTTTATTATTTAAGAGTAAACAAAATTCTACCCGTGAATAATGGTGCAATACTTACCAATACCAATATTCAATCAATTTTTATTATTTAAATAAAAAAATTAGTAATTGGTTTTTTGTTGCACACATGAACGCATGCAAATTGTTCATTATAACTAAGAAATTTCAACTATTTGTTTCAGTCACCAGATGCTGCACACGGGCTCATCATATTACAAACATGGGCTCTCTATGAAAGCGGAGACCTCTCAAGAATTGTAGACACATCAATAACTGATACTTCAGATCTTAATGAAGCATGCAAGTTCTTAAAAATCGGACTTCTATGCACACAAGAAGCATCCAAACTCCGACCTTACATGCCCAAAGTACTTAAACTGCTAGAAGGTGAAATTGATGTAGAGTCTGAAAAAATTACTAAACCAGGAGTTATTTCTAATTTCATGGAGCTCAAGCTTAGAGGCCAATCTACACCTACTGACAAAGGAAATAAGGATTCATCGTTAACTGCATCGAGTGGTTCAACATCTTCGTCTCGAGCCACAATGACATATACTACCCTGAGCAACAGAGAATGA

Functional annotation

Database	accession number	e-value	annotation
nr	XP_008806819.1	9.8e-133	cold-responsive protein kinase 1-like isoform X1
Swissprot	Q93YN1.1	3.9e-110	Cold-responsive protein kinase 1
trEMBL	A0A8B8ZLL1	8.4e-134	cold-responsive protein kinase 1-like isoform X1

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT1G16670.1	59.70	4e-116	415		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g366430	AT1G16670.1	330	118	3	143	469	35	352	59.70	4e-116	415
g366430	AT3G09010.1	307	138	4	143	448	40	333	50.49	3e-87	319
g366430	AT1G29730.1	316	140	5	143	456	634	934	50.32	3e-84	309

Ortholog group

Species	Genes
Allium cepa	g124499.t1; g333320.t1; g366430.t1; g536661.t1; g66594.t1
Allium fistulosum	AfisC1G03109; AfisC1G03647; AfisC1G03650; AfisC2G09370
Allium sativum	Asa6G00356.1; Asa7G04946.1; Asa7G04948.1; Asa7G04958.1
Arabidopsis thaliana	AT1G16670.1
Oryza sativa	LOC_Os02g06930.1; LOC_Os02g06930.2; LOC_Os02g06930.3; LOC_Os02g06930.4; LOC_Os04g52840.1; LOC_Os04g52840.2; LOC_Os06g46330.1; LOC_Os08g10070.1; LOC_Os08g10070.2

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	152	349	156.6	6.5e-46

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0002237	P	response to molecule of bacterial origin
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0006950	P	response to stress
GO:0008150	P	biological_process
GO:0009266	P	response to temperature stimulus
GO:0009409	P	response to cold
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009617	P	response to bacterium
GO:0009625	P	response to insect
GO:0009628	P	response to abiotic stimulus
GO:0009987	P	cellular process
GO:0010033	P	response to organic substance
GO:0050826	P	response to freezing
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0032386	P	regulation of intracellular transport
GO:0032388	P	positive regulation of intracellular transport
GO:0032879	P	regulation of localization
GO:0032880	P	regulation of protein localization
GO:0033157	P	regulation of intracellular protein transport
GO:0033158	P	regulation of protein import into nucleus, translocation
GO:0033160	P	positive regulation of protein import into nucleus, translocation
GO:0036211	P	protein modification process
GO:0042221	P	response to chemical
GO:0042306	P	regulation of protein import into nucleus
GO:0042307	P	positive regulation of protein import into nucleus
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0046777	P	protein autophosphorylation
GO:0046822	P	regulation of nucleocytoplasmic transport
GO:0046824	P	positive regulation of nucleocytoplasmic transport
GO:0048518	P	positive regulation of biological process
GO:0050789	P	regulation of biological process
GO:0050896	P	response to stimulus
GO:0051049	P	regulation of transport
GO:0051050	P	positive regulation of transport
GO:0051222	P	positive regulation of protein transport
GO:0051223	P	regulation of protein transport
GO:0051704	P	multi-organism process
GO:0060341	P	regulation of cellular localization
GO:0065007	P	biological regulation
GO:0070201	P	regulation of establishment of protein localization
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0090087	P	regulation of peptide transport
GO:0090316	P	positive regulation of intracellular protein transport
GO:1900180	P	regulation of protein localization to nucleus
GO:1900182	P	positive regulation of protein localization to nucleus
GO:1901564	P	organonitrogen compound metabolic process
GO:1903827	P	regulation of cellular protein localization
GO:1903829	P	positive regulation of cellular protein localization
GO:1904589	P	regulation of protein import
GO:1904591	P	positive regulation of protein import
GO:1904951	P	positive regulation of establishment of protein localization
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K04733	IRAK4; interleukin-1 receptor-associated kinase 4	EC:2.7.11.1	MAPK signaling pathway	ko04010
			NF-kappa B signaling pathway	ko04064
			Toll-like receptor signaling pathway	ko04620
			Toll and Imd signaling pathway	ko04624
			NOD-like receptor signaling pathway	ko04621
			Neurotrophin signaling pathway	ko04722

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network