result

Gene information

Detail information of g366449

Location

Gene	Chr	Start	End	Strand
g366449	CHR6	181151439	181155783	+

Sequences

CDS

Protein

Gene

>g366449.t1
ATGGTCCAGCACTTCACCCAACCCAACTGGGATAGGAACGATCGACCCATACACTGCACCCGTTTGAAATTCGACTCGTCCGCCTTGCTTGACCACCGACTGACCCGTCATAACAATGCTCTCTCAAGGTACACCTTTTCTGCTTTGGCAAAGCTAACGGTTAAGCCTACCTCATATGCACCAAGCGGGAAGGGAAGTGAAAGTTGTCCTAAAAGGTTAGGGACCACCAAAAACCAGTTTACTCAATCGACAAGCCACCGAACAGCTCCCTTGTTCATCTTCGTCTTCATCCAGGTCCGCCCTCGACCTCAGGTTCTTGTACTGCCTTCAACCAATCTTCTTCCTTCAGTACTCTTACCACACTTAGGCTTTCTTCACCTAAGTGACTAACATCCTCTTTATATTCTAGTCAGATATCCCAGAATGAGTCCCATTAGAAGAACTTGCGAGTACACTGGCATTCTTAAAAAGGATCAATTCGGACTAGAGAAAATCTTCTTACCTCCTCACAAATGATTGATTAATATAGTTTTGCCTCCTTTGCAGTGGAAGGAGCATCGTCCCTAATCTGGTTCCTACCAATTATGCCAAAATCATCAATTCATTCCAATTTCAAAAAATAAAACAAAGGTAGATAAATATAAGAGAGGGAAAACAACAAACAAAAAGTAAACAAGGTGACGATGGATTTTTACAAAGGTTCATTCTATATTTGTCAATGGATATCCAAAAAATCTGAAATCTATCCGCATTTGTATTTGTATGCATAAATATTTGATATCTAGAGAAAAAAATGGATGTAGATACGAAGGCATCCATATTCGAAAAATATTCGACTGGTTTTGTCAAGATTATAGTTTAATTTATGTGTATTTTAGCATAAGGAAAGATATATATTTATTTTTTGTATTACATGCTTATCAACTGCTCAAAACTATTTATTACATTATATTTTTTGATTTTGCATACTTTTATAATCAATAAGATTGAAAAGGGACTTATGTTAAATTAAATTTTTTTTATTTATGTTTCTTGATTTATTGATCGTTGGCGGATATGATAATATCCTATATCTATCTATATACGTGGATGCGGATATATGTCATTCAAAAATGATTTTGAATGCGGATGCGAATGTGACATTATACTTATTTGAAAGTATCTATTGACATGCCTAGTTTACTCTAATGTTGACCTACGTCCTCTTTCCCATTATTTCTCACTACCTTTGATCGTTTTCCTTTACAACTTTGTTTTATATTATAATATGTAAATTTATTAATACAAGAATGGAGGATTGGTGGGGAATACAACAACGTTTTGACGTATTTATATAGTGGAGGGACTCACCTGTCCAATTTTTCAATTTGAGAACTACTTTATAATTAAATTTGGGTATGAGAATTTTCATCTTCATTTCTTTGTGTAGTGTCATTTTCTTTTTGATTGGAATCTCTTTCCTTGATCAGAGTCATGTTTTTTGATTGGAGCCTTTTTTGTTGGAGTGGAATGCTTTTCTTTTCGAGCAAAACCAGCCCTTATCTTGAATGGAGCGCTCCAAATCGAAGCGCTCAAAAATTGACAGCGCTTGACTCTTGAGTGTTACACCAGTTCTTCCTCTAAGGTCAGGCTTGAGAGTACCCGAAGCATGCTTCAAAACACGTTCGAAGTATGAAGTGTTACCCAGAACTTGGTTCAGGGTCAGCCTTGAGCATAGCGTTCAAGTAACGCTACCACATAGCTTGCTCCGGGAGTAGCGTTGACCAACCAACTAATACAGATAAACCCCCGCCCAAACAAAAAGGAGAGTTGTCCCTTTCTCTTCTTCCTTGCCTCTTATTTTTAAACTTAAACATTTTCTAAAAGCTTAAAATCCATTATAATAGCGTATTAAGAGAAATCAATTATTGTAATTGTAAAAGGAGGCCAATAAAAAGTATATTTAGAGAAGGTGAACTCCAAACTAATAGTTGGCATTATTTGTCTTGCATTTACTCCCTTTTTCATTACCCTCTTTACAAATCAATATTCAAACCACTTTCATAAGGCAATCTCTTTACATTCGAAGAAATAGTTTTGTCCTTTTAATATATGGAAGATTGGTCAAGATAGTTGGCTCAGTTCGTCGATGGTTTGGACTGCCAAATCAAATGTAGCGCGTTTGAACTCCGAAACTGGCACATGTTGGTGCAAGTTAATAAGATATGATGGAAAATCTATTTGAGAAACTAAAAAATAAAGCAGTAAAAGCGGATAATGTGGATGGATGTTGAGTTAGATCTATAGTAAGCAAGAAATTGTTGTATTACATTAACTGGAATAATAGGAAATATAATTATGGGGCTTTGCACCTTCGATCTCTATTTCTGATGTTTTTACAAGAAAGGCCTCTGCAGCAATGAATATATAAATTAGATTTCTATTTTTCTAAATGAGAAAGTGCAAAGTAGCTTGCACTTTTTGATAGAAAGTGCAAGTTAATTTGTGTTTTTCAAAAAGTTTTTCAAAATTTAGAAAATCAAATTTCTTTTCTATTTTTGATAGAAATTGCAGGTCAGCTTATATTCTCCATCAGAAATGTAAAAATTATCTTGAGTTTCAATTTTTATTTTAAAATATAGACTTATTTCCGTGTTAGGGGTACTTTTCTTGTAATAGCACAATAAACGTGTATACGTTTGTGTTTTAGTGAACAATTAATTGATGATGATCAACTGAAGTCTTCCTTCTACTTGGCCAAGTCAACCTTTTGAATTTTCCAAACAAGTCTTACTAATCTTCACCTTACTTAATCATCAACACCACCTAATTAATGCCAAGAAATCACTCAACACAATGACTTCCATTCTCGCCTCCTTCTTCCTCACCCTCCTCTCAATCTCAACCACCCACCCACTCAATCGCCACTATCAGCTCTCCTCCCCAATCATCCACGGCGAATTACCAACTCTCAGAAATTCACTAAGAAGAAGCTTAGCCAGTATCTCCACTTCCGGTTCACATACAAACGGTACAAATACAAACGCTACAAATACAACTGCTCCTGCACCCAATTCTTCAAACAAAATCCATAAGAAAAAACACAAGCATCGCATTCGCAATTGGATCATCGGCTTCGCTGTTGGCACTATAGCTGGTATCGTAAGCGGTCTTCTTGCGTCCATAGCGTTTCGGTTCTTACTGAACTGTATCGGAGGGAGGTACAAGACTAAAGGTATGTTCTTTCTTCACAATTTAATGCATGAATTCACAACGTTTAACGAATATTTTGAAACAGGCGGCTTATCCATATTCAGCTCGATCATAAAAGCAAAAGACCTGACCTTTCTAGATCACGACGAAGCGTTGGCGACGCTGGAAGTGATCGGAAGAGGAGGGTGCGGAGAAGTGTATAGAGCGGAGCTGCAGGGAAGTCCTGGAAAGATGATCGCGGTGAAGAAGATTGCGAAGACATCGGCCGTCGGTGAACCGACAGAAGACGAAAGCCGTTTGCTTGATAGATGGACGAAGCAGATTCGGGCGGAGATATTAACGGTGGGCCGGATCAGACACCGTAATCTGCTTCCCCTGTTGGCCCATAAAGCCCGGTCTGGTACGCACTTTTTGATCTATGAGTGTCTGAAAAACGGAAGCTTGCATGACTTGATTAAGCAGTCTTCACAGGTAACGTTTTTGACGCCTAATTGCATAACCGTTAGCAACTTAACAAGCAGAGTTAATCTGGAACAAAAGGATAAATAGTAAAAATTTAAGATATTCGAGATGATCGCAGGGGCTAAGAGAGTTAGATTGGAGGACAAGATTGAATATAGCGAAAGGAATAGCAGCGGGCATGGAGTACATGCACGTGAGTCATAAACCGAACATAATACACAGGGACTTAAAACCTGCGAACATATTGATCGACGACAACATGGAGGCAAGAATAGCGGACTTTGGATTCGCGAAAGAGATACCGGATGCCAACACTCATATGACATCTTCAAACGTGGCCGGAACATATGGATATATAGCGCCCGAGTACCACCAGACGTTTAAATTTACGGTGAAGTGCGACATATACAGCTTCGGGGTGATTCTTGCAGTGATAGTGACAGGGAGGTTTCCATCTGATGATTTCTTTCAGGAGACGGAGGAATTAAGTCTAGTGAAGTGGTTGAGGAATGTGATGAGTTCAGACAATCCGAGTAGGGCAATAGATGAGAGGTTGGTGTTGGGTGGGAGTGAATTTGAGAAGGAGATGTTGCTTGTGTTGAAAATTGCTTGGTTTTGTACGGTCGATGATCCTAAGGAGAGGCCCGATAGCAAGAATGTTAGGCTAATGTTGAGTCGGGTTGAAGGTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020246449.1	6.2e-127	leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1
Swissprot	Q9SKB2.1	2.7e-111	Protein SUPPRESSOR OF BIR1-1
trEMBL	A0A5P1E8H2	4.5e-127	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G31880.1	53.85	2e-126	449	EVR;SOBIR1	Leucine-rich repeat protein kinase family protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g366449	AT2G31880.1	429	188	7	229	651	216	640	53.85	2e-126	449
g366449	AT1G17230.1	292	153	7	362	652	804	1077	41.10	2e-54	211
g366449	AT5G63930.1	314	161	8	339	651	794	1082	40.45	1e-53	208

Ortholog group

Species	Genes
Allium cepa	g366449.t1
Allium fistulosum	AfisC6G02324
Allium sativum	Asa8G04408.1
Arabidopsis thaliana	AT2G31880.1
Oryza sativa	LOC_Os06g18000.1

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	359	592	143.6	6.6e-42

Gene Ontology

Accession	Ontology	Name
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004713	F	protein tyrosine kinase activity
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0010941	P	regulation of cell death
GO:0010942	P	positive regulation of cell death
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0018108	P	peptidyl-tyrosine phosphorylation
GO:0018193	P	peptidyl-amino acid modification
GO:0018212	P	peptidyl-tyrosine modification
GO:0019538	P	protein metabolic process
GO:0031347	P	regulation of defense response
GO:0031349	P	positive regulation of defense response
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0048518	P	positive regulation of biological process
GO:0048522	P	positive regulation of cellular process
GO:0048583	P	regulation of response to stimulus
GO:0048584	P	positive regulation of response to stimulus
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:0071944	C	cell periphery
GO:0080134	P	regulation of response to stress
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network