Gene | Chr | Start | End | Strand |
---|---|---|---|---|
g368594 | Scaffold_72888:HRSCAF_455974 | 82356 | 93796 | - |
CDS |
Protein |
Gene |
Database | accession number | e-value | annotation |
---|---|---|---|
nr | XP_020257733.1 | 4.9e-303 | helicase-like transcription factor CHR28 isoform X1 |
Swissprot | Q94BR5.1 | 1.5e-192 | Protein SNF2-RING-HELICASE-LIKE 2 |
trEMBL | A0A5P1FH65 | 3.5e-303 | Helicase ATP-binding domain-containing protein |
TAIR id | % identity | e-value | bit score | gene aliases | Short description |
---|---|---|---|---|---|
AT1G61140.1 | 52.44 | 0.0 | 780 | EDA16 | SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related |
Species | Genes |
---|---|
Allium cepa | g368594.t1 |
Allium fistulosum | AfisC2G00004 |
Allium sativum | Asa5G00175.1 |
Arabidopsis thaliana | |
Oryza sativa | LOC_Os01g57110.1; LOC_Os01g57110.2 |
Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
---|---|---|---|---|---|---|
PF00176.20 | SNF2_N | Family | 514 | 838 | 200.7 | 2.4e-59 |
PF00097.22 | zf-C3HC4 | Domain | 872 | 908 | 24.0 | 2.3e-05 |
PF00271.28 | Helicase_C | Family | 1034 | 1136 | 66.5 | 2.2e-18 |
Accession | Ontology | Name |
---|---|---|
GO:0000724 | P | double-strand break repair via homologous recombination |
GO:0000725 | P | recombinational repair |
GO:0008152 | P | metabolic process |
GO:0006139 | P | nucleobase-containing compound metabolic process |
GO:0006259 | P | DNA metabolic process |
GO:0006281 | P | DNA repair |
GO:0006302 | P | double-strand break repair |
GO:0006310 | P | DNA recombination |
GO:0006725 | P | cellular aromatic compound metabolic process |
GO:0006807 | P | nitrogen compound metabolic process |
GO:0006950 | P | response to stress |
GO:0006974 | P | cellular response to DNA damage stimulus |
GO:0008150 | P | biological_process |
GO:0009292 | P | genetic transfer |
GO:0009294 | P | DNA mediated transformation |
GO:0009987 | P | cellular process |
GO:0033554 | P | cellular response to stress |
GO:0034641 | P | cellular nitrogen compound metabolic process |
GO:0043170 | P | macromolecule metabolic process |
GO:0044237 | P | cellular metabolic process |
GO:0044238 | P | primary metabolic process |
GO:0044260 | P | cellular macromolecule metabolic process |
GO:0044764 | P | multi-organism cellular process |
GO:0045003 | P | double-strand break repair via synthesis-dependent strand annealing |
GO:0046483 | P | heterocycle metabolic process |
GO:0050896 | P | response to stimulus |
GO:0051704 | P | multi-organism process |
GO:0051716 | P | cellular response to stimulus |
GO:0071704 | P | organic substance metabolic process |
GO:0090304 | P | nucleic acid metabolic process |
GO:1901360 | P | organic cyclic compound metabolic process |
KO | Name | Enzyme ID | Pathway | Pathway ID |
---|---|---|---|---|
- | - | - | - | - |