result

Gene information

Detail information of g38580

Location

Gene	Chr	Start	End	Strand
g38580	Scaffold_23193:HRSCAF_216742	171026	174427	+

Sequences

CDS

Protein

Gene

>g38580.t1
ATGACTGGACAACTAATGCACAAGAGCGATGTGTATAGTTTTGGTGTCATTCTTTTGGAGCTTTTAACAGGAAGGAAACCCGTAGACCACACTATGCCGAAAGGACAACAAAGTTTGGTTACCTGGGTAGGTTTTTTGAATACAGCTCACACCTGAAGCTAGTGTTTCAATAGTTGCCTATAAAAATAATCACCAAATTAACTTATACATTCATGTTATTTTACATTGAGTTCAGGCAACACCAAGGTTGAGCGAAGACAAAGTTAAGCAATGTGTTGATCCAAAACTCAAAGATGACTATCCACCAAAAGCTGTTGCTAAGGTGTGATTATGAAGTACGTTCTGGTCATATCTTATTGATATATTTATTTGTAAATAAAATTCGATTTTAGAACAGTATGGTCTGCATCCGAGCTAGAGAAGGCCGTAAAGGTTCAAAGAGAAAGGAAGGGACACAAAATCAAGGTTAAGCTTCAGTTCGAGTCATGCATTTTTGGTGCATTATTGCATCTATCCTGACTAGTAAATATTTATTACCAATCACTCTATAATTTGATAACAAATATGGTTAATGAATAGAAATATTATGATATATATTGCAGTCGCAATTTGACATGCAATGGCTTATAGTGAAGTTGTGCTGCCTCCATATGTATACACATCTTTGGATTTAGGTATCTGTCAAATATAGCTGCAGAACTTTTAATATGACAATGTTCCGTACTTTGATTCCTTTATGATTGAATTGAAGAAATTTTTTATTGCTCTATTTCCCAAACACGCTGTGATATTATTTACTCAGCTTGCATCTTTACACTCGATATAACGGCTCTTGCATATATGTTAGCAACAAATTTGAAGTCTTTCTTACTACTCCTGTCAGCACTCTCTTCATGGGAAATGAAGAAATATCATTGTACACAATAATACAAGTGTGAAATTGTGCATAAGACAGCCAGCAACTGAAATTTTGAAATCCCTGTGTTTAGAAGTCAATAGTTCATGTTCTCACCTCTAGCCAATGATGTTTTCATTTGTACATATAAAAGCTAATAATAAAATGAAAAGGAAAAGTAAAAATATATATGAAATTTAAGATTGGTACAAGTATCTTATTGCATAGGTGTCGGCAATGCAAAGTACGTAATATGTTTGCATTACCACTTATATTTAATTATGTTTTTTCAACACATTGTTCACAAATCACAACATCAAACCATTAATTGGTTTGTCACGCGCGCTCATAAGATATTATAAAAGAAAGTGCAAACATTATGTATAATACTTTACCATCAAGTCAGGCCTGCGAGGTTCCGATCTATTGTATCTATTATATATTAAAGACTGGAACATATGCAATGTTTTTTTTTAAAAACATTTTTCCAGATTAAATTCTGAATTCCAGTTCATTCATCTTACATTCTGAATTCATGTAACCGACCTATATTCATTATATTTTATTTTTTGCTTTTCACGTAGTCTTTTCTTCCTCTCTTCCACAGCCTCTGATTGATCTCTTGCATACTTATTAGCTAATTGTAATTTACTTCTTACTTGGTTGTCTTTTAACTTGATCACTCACTTCTTCTTCATTGTGTTTTTCCATATTTGATTTTTTTTACCTTCCCAAAAATGACAATTTAAATTAAATTGTTGAATGTGTACATGTTTTCTCTTCCAGTGGATAAAAGTTTAACGGGTGAAATTTTGATTCCATGTTGGTATGTATATAGAGGAAAGTCAAGTTTATGTTTTCCCAAATGTGGAGATTTTGGTTTTCTAATAAAGGAAGAATATGTTCAAGATGGATGGTTTTTGTTTTATTTCTATAGTGTTTTTTCCACCGAGTCGATGTACTTTTACTAAGGAGCACGTTACGTCGCTCTTTATCACTAATCTACACTCTGTACATAACCAAGGGTGCCATAAAGTCATATATCACTCTTTCTACCAAGCCAATATATTGATAGCACTTGGGAGAGCACTTTATCACTCTTTTTTGTATGCCTACACTATGCTTGTAACGATAGTTCTTGGGGTGCATTATGTGCCTCTTTCCCACAAGTCTGCACTGCAGTATGTTTATGCTTTGGGAGTAATTTGAATTTCTTCAACTATATGTAGTCATGGTATATCCTACCACTAAGGGATTTATTCAATAAAATTTTAGGCTACTTATCTCTTAGGTTTGTCCCTCCACAAGGGGATTAGTTCTATTTAAAGTATTCTTCTATGATCACAAGTACAGACTAGCCTTGCACTTGCCAACTTTTCTGCTAAAGTTACGTCCACATATCATGTAAAAGTACTCAAAAAGGTCTGGCAAGTGATCAAGGACAATGCTCATAATGTATAGGGTAACTTAGGATAACTTATAATGCTTTAGCAACCGTAGAATATCTATATTATCGTTGACCATTGCTACTCCATGAAAGTTGTGAGTATTTCATAATATAAGTTATCATTTCACAAACAGTTCAAGATTTACTTATGTCTAATTTGTACTATAACGAACAAGTGTTTATTTGTGCTTAATATAGTCTTTTCTTTGTTTAGGATGCTTGTATAAAACAAGCATCATTAATTGGTATTAAGCACGTCAAATATGTATGTGATGGAACCGGGGCTGAACATGCTGTAAAGGTAATTAACTCGGAACATTTCTATAATTTGAGCTTTGAGAAGGCAAAAAGAAAAATTGAAAAAGCTATGCTAGAAGCTTCAGAAAAAGATGAATGCAGTGGAGGGCTGATCCGGAGTAAGTTTTCTTGTTATTAATATGTGATGATTATTAGAATAATAAAATTCTAGGTAACAATTGATACTAACAATATCGTTATTATTATTCAGTCAAACATATCAATTCGGAAAACCATGTTACTCATGTCGAAAGGAAATATATTAGGGAAATAGAAGAAGAGAAGGACGCCCGCCGGAAAGGAAAGAAAGCGTAAGAGGTGTGAATTATAAAATCAAATATAAATTTTAATACTTCTTGAATAGTTGTTCTCCATATAGGTTTCTGGAATGTTACTTCACACTTCATGCTTAATAGTTACACGTATGTACAAATATTGGATTTTTTGTTCTTACAGTCTATATTTTTTGTTCTTTCAATATATAGATTATTTTAATTTATAGTTATGAGTCTATCTTTTGCTGCATACTTTGAAAGTGATACAAATTTGAGGAAGGTCATTTGTATATTGAATAAAAATAGTTGGTTGACCATAACCTACCTAATTGTAGTAAAATATGTACTAAAATATCATAATTCTGAACTCATAAACTGTTAATTATACATGATTCTAAAATCTTTATGTTACATCATCTTTGACAGAGGAAGGGATCAGAACTAAATCAAGAAAGTTGACTAGGTTCATCATTATCCCAGCACTTTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_023155874.1	3.9e-32	probable protein kinase At2g41970
Swissprot	Q8H1G6.1	1.3e-32	PTI1-like tyrosine-protein kinase 1
trEMBL	A0A1D6GIV1	2.8e-32	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT2G30740.1	89.71	1e-32	134		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g38580	AT2G30740.1	68	7	0	1	68	253	320	89.71	1e-32	134
g38580	AT2G47060.4	87	16	1	1	80	253	339	73.56	2e-32	133
g38580	AT1G06700.2	66	6	0	1	66	250	315	90.91	3e-32	133

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	4	34	23.2	3.2e-05

Gene Ontology

Accession	Ontology	Name
GO:0000003	P	reproduction
GO:0005886	C	plasma membrane
GO:0005575	C	cellular_component
GO:0000902	P	cell morphogenesis
GO:0000904	P	cell morphogenesis involved in differentiation
GO:0008152	P	metabolic process
GO:0016049	P	cell growth
GO:0003006	P	developmental process involved in reproduction
GO:0003674	F	molecular_function
GO:0016020	C	membrane
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0004675	F	transmembrane receptor protein serine/threonine kinase activity
GO:0004888	F	transmembrane signaling receptor activity
GO:0007165	P	signal transduction
GO:0007178	P	transmembrane receptor protein serine/threonine kinase signaling pathway
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0040007	P	growth
GO:0007154	P	cell communication
GO:0007166	P	cell surface receptor signaling pathway
GO:0007167	P	enzyme linked receptor protein signaling pathway
GO:0007275	P	multicellular organism development
GO:0009653	P	anatomical structure morphogenesis
GO:0009888	P	tissue development
GO:0008150	P	biological_process
GO:0009826	P	unidimensional cell growth
GO:0009856	P	pollination
GO:0009860	P	pollen tube growth
GO:0009932	P	cell tip growth
GO:0009987	P	cellular process
GO:0010015	P	root morphogenesis
GO:0010053	P	root epidermal cell differentiation
GO:0010054	P	trichoblast differentiation
GO:0016043	P	cellular component organization
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019199	F	transmembrane receptor protein kinase activity
GO:0019538	P	protein metabolic process
GO:0021700	P	developmental maturation
GO:0022414	P	reproductive process
GO:0022622	P	root system development
GO:0023052	P	signaling
GO:0030154	P	cell differentiation
GO:0032501	P	multicellular organismal process
GO:0032502	P	developmental process
GO:0032989	P	cellular component morphogenesis
GO:0036211	P	protein modification process
GO:0038023	F	signaling receptor activity
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0044706	P	multi-multicellular organism process
GO:0048364	P	root development
GO:0048468	P	cell development
GO:0048469	P	cell maturation
GO:0048588	P	developmental cell growth
GO:0048589	P	developmental growth
GO:0048731	P	system development
GO:0048764	P	trichoblast maturation
GO:0048765	P	root hair cell differentiation
GO:0048767	P	root hair elongation
GO:0048768	P	root hair cell tip growth
GO:0048856	P	anatomical structure development
GO:0048868	P	pollen tube development
GO:0048869	P	cellular developmental process
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0060089	F	molecular transducer activity
GO:0060560	P	developmental growth involved in morphogenesis
GO:0065007	P	biological regulation
GO:0071695	P	anatomical structure maturation
GO:0071704	P	organic substance metabolic process
GO:0071840	P	cellular component organization or biogenesis
GO:0071944	C	cell periphery
GO:0080147	P	root hair cell development
GO:0090558	P	plant epidermis development
GO:0090627	P	plant epidermal cell differentiation
GO:0099402	P	plant organ development
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096
GO:1905392

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network