result

Gene information

Detail information of g388171

Location

Gene	Chr	Start	End	Strand
g388171	Scaffold_75301:HRSCAF_458387	16828	22452	+

Sequences

CDS

>g388171.t1
ATGGCTGAAAAATTCGTCCTCTACCTTGCACAATTCAACTCTTATGAGGTGATTGCGATTTTGTTTGAGGGTTCGGATGTTGATATTGATTCGGTGGTCAAGGTTGTAGACATAGGAAATGGTCGTTGTGAGCCCGGGTATGGGTTGTGGATTTGGAAGGTGAAGGTTGATATAAGCATAATGCTGGAAGAAGCGATTCAGTATGTAAAATTTTTGCAGCTCCAAATTAAGCTTTTGAGCACGGATGAATTTCCAAGTGAGGGGTTTTATATCGAAACACCAATGATGGAATTCAGTATGCAATCAAGGCATTCTACAAGTCCCGACTATCGAAGGTGTAGAAGAGAGGTATCCATCATAAAATTGTTGGAACATCCAAATATTGTAAATCTTGTTGAGGTGATTGATGATCCTGAATCAGATAGATTTTACATGGTTTTAGAATACGTGGAAGGTAAGTGGGTATGTGATAACTCGGGAGCATGTGGTGGAATAGGAGAATTCACTGCTCGAAGATACTTACGGGACATGATTATTGGACTCATGTATCTACATGCCCATGCGATTGTTTTGGGTGAGGCTGTCGCGGGTTGGGTCGCGAGTTTCTTGCGACTTGTTTTTTTTCTTTTTTTCCGGCGGTTGTTCGAATTGGGAATGGAGGTGGCTATTTTGGTAGAAGGGGATGATCAGGTTGAAAGCAGAAGGGAGTGGTGGAGAAAGGGGAGGTCGTCCGATTTTTGTCGATGTGGTTTTGAGTGGTTGCTCTGGTCAGGATTCATGGTGGAGCTCGGCAGGCAGACAGTGATGCAGTTGTGTGGCAGTTTTGGCCAGTTTGTTGAGGAGAAGGGCAGACAACTTACTCCAAACATATCGAAGCTTATACTCAAAAAGGTCGCAAACGGCATTTTAAACTCAATGGGAGTGGTTCCGAGTCCTAATTCGACCGTTGCAAGCCTTGGTAGAGAATTGTTAGAATTTTATCCAGAAACAACGGAAAAGGAGGAACAAATCCTTCAAATATTGATCGGTGGGTGCTTTAAATCCTTTTCCAGCGTCATCTTTGTTTCCTCCTCCTTTGTTGACAAAAATCAAATATTGCATCATTCAATGGTGAAGACTTTCAAAGCGCTATTAACGGCAGCGCCAACCGACAAGCAACTTTCAGCACTTGGAGAGCTCATGTATCAGTGCCATTATAGTTACAATAATTGCGGACTTGGGTCACACGGGACTGATAAACTAGTGGAGCTAGTTCAAGAAATGCAGCATCGGCTATTACTTCACACTGACAGTTCAAGCTTGTTTGGTGCAACAAGTGGCATAGTTTGTGTCATTGGAAGAAACTGCATTCGAAGCAGCAAAGAAATCCTAGAGATTAGATGA

Protein

Gene

>g388171.t1
ATGGCTGAAAAATTCGTCCTCTACCTTGCACAATTCAACTCTTATGAGGTAATTTAAAAACCAATTTTCTTTTCTATTTCCGTTTTAAACCGGATTAGATTAATTTTGCTTGAGGTTGTTGAATTCGGAATTGGGGTGTTTGTGATTGCAGGTGATTGCGATTTTGTTTGAGGGTTCGGTTTTGTGAATGAAGTTGCTGTAGGAAATAGAGGATGTTGATATTGATTCGGTGGTCAAGGTTGTAGACATAGGAAATGGTCGTTGTGAGCCCGGGTATGGGTTGTGGATTTGGTAATTAGCAATTTTTAGTGCAAAGGAAAGTTGATGATGGAATTGGATTTTTTTATAGAGGAAGGTTTGTTTTGATTTGGGTTTGCAGTGAGGTAGGTACGAATTTATGGTGTAGGAGATTCGGTGCTTGATTGTTGAAGTTGTTTGAACTTGCAGTTGAGGTTGGAAGGTGTTAAGGTGGGTGATGGTGACTGGAGATGGTTGTTGAAGGTTTGCTGATGTGGGAGATGGAGGCTGCTGTGTGTTATGGCAGTTTTGTGATGAGTGGCAGAGGAAGTAGAGTTGCGGTTTGAGGAAGGTGAAGGTAGGTTTGATGGTGAAAGGTGGACATTTTGAACACTGAGATTTAACTGATAATTTTACATTTGCTGCATGAATATAGTTTATTTGAAGAAAGTCTCATGAGATTTAACTGATAGGTTGATATAAGCATAATGCTGGAAGAAGCGATTCAGTATGTAAAATTTTTGCAGCTCCAAATTAAGGTACACACATTAAGTTTATTAATTAGATTCCCTACGCATGTGCTTGCTAATTATTCATCTAATATATTTAACTGACAACGCCTAGGATTCAATGTACCTTACAATTGTACTTAGAACAAGGCAAATCTAGTATAATTTATACTATGAGATAGAAACACATTAGCTAATTCTCTCCTATAAAATAAGGTTGATGCATCATGCAACCGTAAATTTAAGAATATATATTGCGGTCAATTTTGAACTACAATCAACATGTACATCAAAATTATGAATAAATCTTGAGAACTAATCACTTCAGGCTTTATATTTGCAGCTTTTGAGCACGGATGAATTGTAGATGTATGCACCACTTGCTTACAATGGCATGGATATTGGTTTAGAACTGAAGATTCATCTTCCTCAGCAGCAATAATAATATGAAGTTGTTGAATTAATTGATCATTTTAAAGCTTTCTAACAGTCCAAGTGAGGGGTAATTATATTTTTATTGAACGAGTGTACAATTCTTTTTCCTTTTTCTTTAATTCTCTTGCTACAAAGCAAAAGCCAGATCCTGAAGAATGAAGGCTACTCCAGGTTTTTTTCTGTTAAAAAGCAGAATATACGTAATTCATAGTTTGTAATACGGTCTGCGAACATATTCCTGCAAGTTATTTGACAAGAAAACTATGATGAAATTATATTTAGTGTCCAACATTTTTATGCTGGTTACCGCTTTGAAAAACCAAAGTGACGCTCAAAGATATGATGGAACCTTCCGAATATATATGATAAAAAGATTTTTAGTAAGGTCATTTTATTCTCATGCATAACCATTCTTGTATGTGATTACTCAGGTTTTATATCGAAACACCAATGATGGAATTCAGTATGCAATCAAGGCAAGAGTTTCTACCCTTTGAATTTCTGTTTTAAACTATTTTCCAACACACATGTGCGCGCGCGCACACACACATATAAACATATTTAATTATTTATGTGGCTATCATATGTTTATGTTCGATTATTTTATGCTAGGTTACTCAATATTGGGTTTATCTTTTTCTTATTTAACAATCTGCAGTTACCGATTACTGAAATTTGATTTTAAACTCTCTTTGAGTGCAGGCATTCTACAAGTCCCGACTATCGAAGGTGTAGGTATCATCATCTGAGGCTGCTATGATAGAAGTTAGAAGAGAGGTAGATGCCTCTGATCTTAATATTTTTATATGCTTAATTAAGCATGAGGGTTATTTAGTTAGAATATAGCATCAGTAGATTTTATAATAGTGGTCTTTCTGATATTTACCTCTTCGTTTCTCAGGTATCCATCATAAAATTGTTGGAACATCCAAATATTGTAAATCTTGTTGAGGTGATTGATGATCCTGAATCAGATAGATTTTACATGGGTAATTAATTCTGTTATACTTTTCTCTCAGACTTATTTTTTTATAATTTGTTTTTCTGGAAAATTCTCAAAAAAAACCTTTTTGTGTTAAAGCGAAATTTCTATGTGTGTAGTTTTAGAATACGTGGAAGGTAAGTGGGTATGTGATAACTCGGGAGCATGTGGTGGAATAGGAGAATTCACTGCTCGAAGATACTTACGGGACATGATTATTGGACTCATGTATCTACATGCCCATGTATGTTATTATATTTAGCTGCTATGTTATTATCAGCATGCATGATGTTATTATTATTCTAAATCTGCCTTAGTTGATCCTTATTGATCATGTATGCATTCAAACGATAAGATATCTGATTGAATTTTGTTTAATACATCTTTATGGGACTGTGTAAACTCCCTTACTCTGTTAATGAACAAGGAATCGTTATTGTTATAGGAAATTTCAATTACAAGTAGTTTGGTAAAAAGCTTCTAGGATTGAATTAAATCTCGGTTCCTATTTGATTGCTGAGAGGATTGTGAGTTAGAGAAGCAGCGGTTGCGTGTGAGTTATGAGGTGGGTGGAGCGTTGTAGGATTTGGGAATTAAGGTACTGGAAATGCTGTAGGGAGTTACGGTTGGTGATTTGAGCGCAGTTTTGAGGGTTTAGGCGATTGTTTTGGGTGAGGCTGTCGCGGGTTGGGTCGCGAGTTTCTTGCGACTTGTTTTTTTTCTTTTTTTCCGGCGGTTGTTCGAATTGGGAATGGAGGTGGCTATTTTGGTAGAAGGGGATGATCAGGTTGAAAGCAGAAGGGAGTGGTGGAGAAAGGGGAGGTCGTCCGATTTTTGTCGATGTGGTTTTGAGTGGTTGCTCTGGTCAGGATTCATGGTGGAGCTCGGCAGGCAGACAGTGATGCAGTTGTATGATCTGATGGTCGTATGTAATACATGGAATATGGTAGTTTTGAATACGTAATATATGGCAGGTCGATGTTGAGGCAATGGCAGGTGTGGCAGTTTTGGCCAGTTTGTTGAGGAGAAGGGCAGACAACTTACTCCAAACATATCGAAGCTTATACTCAAAAAGGTCGCAAACGGCATTTTAAACTCAATGGGAGTGGTTCCGAGTCCTAATTCGACCGTATGCAAAAAAGTAGCTTTTCGGACTAAATTCTGAGTATCGATAAAATATTTAAATATAAAAAATCGACAAATATGCGGGTTGTTACATCATCTTTCACTAATTTATTCACTACTAGCAGACAAACAGATTAACTTTTTTTAAAATGTTACAGCTGTTACAATACTTTTCCTCCAGGTATTTATAACATCATTTTATGTTCTTTTTTATTCTTGTGAAAACTTGCAATTGAAAAATGGAGGAATCTATCGAAGATGTGAAGAAAGAAACTCAAACTCCTAATAAAGGAGGGTTGAAGACCCTTCCATTTATCATGGGTAATATATTTCATATTACACAAGCTCTTACATATGTTTAGAAAACCTTCTGAATGTTTTTATTCTTGTATGTATGTAGCTAATTAAATATTTGAAAAGGTTGCAAGCCTTGGTAGAGAATTGTTAGAATTTTATCCAGGTATATTTGATAAATTTGATAATATTTGAAAATTTTGATTTATTTCATACAACGTGTTCTTTCCCTCAATTCTGTAACTCTTTTTACCCTACTTATACTGTGCCCAGGTAGAGAATTGTTAGAATTTTATCCAGGTAATTGCACGGCAAAGAATATAAATTTGTGATATTTGTTTATTTATTATGGTATAATAATTCAACTAGAAAGTTCTTACATTAGTGTTTAATTTCTTTAGTTATTAATATTCAGTATTTGCTGAAACTTGCGTATGAATTACTTTTGCTTTCATGTACATCAATATATTTGTCACTGAATATAAACATGCATAACATATGAAAAATAATGGGCTTTTTAAATTGAACTAGAAAGATTTTATAGTGATTTTATTTATACCTTCAGAAAAATTATTGCATTACCAATACAACCCATGTGTAGCATGAGTTCACATCAAGTGCCCCAATAAAACTGAAGAAAACTTTTATTTATTTGCACAATAATGTTTTGTTGCATCATTATCACCTAATATTTTTATTTATTTTTTATTTGAACGAACATACTGCGCATTTGAATAACCACAAAACTAGCCACGGTCCAGTGAAGTTAAATAAATGGTAGGATTTATAACAACGAAGCTTCGCTATTTTATACTTATGCCCTAAACTTATGCCGCTACAACTTATAACGGCGAAGTATTCCCCGTTATAAACTTATAACGACTTATAGCGGCGAAAGCTTCATCGTTATAAAAACTAGCCACTGTTTATAATTGAAACCGAGTATTGCAAAGTATTGAAAATTGAAACTGAGAGTATTCCTTCTACTCCTAGGAAGTAAGTTGAATGCAATTTAATATTGATGCAATTAGGTATTCATGAATCTAAATAATAAACTAACGTTTTGTCGACTGCAGAAACAACGGAAAAGGAGGAACAAATCCTTCAAATATTGATCGGTGGGTGCTTTAAATCCTTTTCCAGCGTCATCTTTGTTTCCTCCTCCTTTGTTGACAAAAATCAAATATTGCATCATTCAATGGTGAAGGTAAGACTAAATCCGTATTTAATTGAGGTTATCTGCTGTTTTTTGACTGCACATACTTTGCTTATGTTATTTTATCCCTTAAAATGCTTCTAATTGATATGTGCTACTGTTTTTTATGAGGTAACACACAGTTTTGATGCCATATTTACTCTTAGGGACAACTAATGTGTCGCTAGTAAAATAATGTGGCTTATCCTTTATTTTAGTTCCTTTGTACGCAAAATTTATACACATGTTGTACGATGTTTGAAGATTTTACTATGCTTGAAGATTTTGCTAACCATGTTGTACGATGATTTGGGAATATATAGACTTTCAAAGCGCTATTAACGGCAGCGCCAACCGACAAGCAACTTTCAGCACTTGGAGAGCTCATGTATCAGGTATTGGTTGTCTAGTCATCTTCTGCTAAAAGGGGCATTTATTTTACTGTCATGTAGTCTTGTATCGTATGAACTCTATCATCAACGCTTATTACTTACCTTACTGGCATACAGTGCCATTATAGTTACAATAATTGCGGACTTGGGTCACACGGGACTGATAAACTAGTGGAGCTAGTTCAAGAAATGCAGCATCGGCTATTACTTCACACTGACAGTTCAAGCTTGTTTGGTGCAACAAGTGGCATAGTTTGTGTCATTGGAAGAAACTGCATTCGAAGCAGCAAAGAAATCCTAGAGGTAACAAACAACCCTCTTTAAAAACATAATTATTTTTACATTTTATTTTTGATTTTTTATCCTTTGGGTTTTAAGGGATGAAGGGATGACATGATCCATTTCTTGTATTTTTCTTCTACTTTTTATCAATAACTTCTTTTTTAGATTAGATGA

Functional annotation

Database	accession number	e-value	annotation
nr	ONK70775.1	3.8e-30	uncharacterized protein A4U43_C04F1400
Swissprot	Q5HZ38.1	7.7e-28	SnRK1-activating protein kinase 1
trEMBL	A0A5P1EXE8	2.8e-30	Protein kinase domain-containing protein

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G60550.1	70.89	1e-29	127	ATSNAK1;GRIK2	geminivirus rep interacting kinase 2

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	query start	query end	subject start	subject end	% identity	e-value	bit score
g388171	AT5G60550.1	79	23	115	193	160	238	70.89	1e-29	127
g388171	AT3G45240.2	79	24	115	193	161	239	69.62	1e-28	124
g388171	AT3G45240.1	79	24	115	193	161	239	69.62	1e-28	124

Ortholog group

Species	Genes
-	-

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF00069.22	Pkinase	Domain	105	190	46.2	3.4e-12

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0009615	P	response to virus
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0004674	F	protein serine/threonine kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009605	P	response to external stimulus
GO:0009607	P	response to biotic stimulus
GO:0051707	P	response to other organism
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0018105	P	peptidyl-serine phosphorylation
GO:0018107	P	peptidyl-threonine phosphorylation
GO:0018193	P	peptidyl-amino acid modification
GO:0018209	P	peptidyl-serine modification
GO:0018210	P	peptidyl-threonine modification
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0030587	P	sorocarp development
GO:0031156	P	regulation of sorocarp development
GO:0032502	P	developmental process
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043207	P	response to external biotic stimulus
GO:0043412	P	macromolecule modification
GO:0043900	P	regulation of multi-organism process
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044464	C	cell part
GO:0045595	P	regulation of cell differentiation
GO:0046777	P	protein autophosphorylation
GO:0048856	P	anatomical structure development
GO:0050789	P	regulation of biological process
GO:0050793	P	regulation of developmental process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051703	P	intraspecies interaction between organisms
GO:0051704	P	multi-organism process
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901261	P	regulation of sorocarp spore cell differentiation
GO:1901564	P	organonitrogen compound metabolic process
GO:2000241	P	regulation of reproductive process
GO:0090702
GO:0099120
GO:0099134
GO:0099135
GO:0099136
GO:0099139
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
K00908	CAMKK1; calcium/calmodulin-dependent protein kinase kinase 1	EC:2.7.11.17	-	-
K07359	CAMKK2; calcium/calmodulin-dependent protein kinase kinase 2	EC:2.7.11.17	AMPK signaling pathway	ko04152
			Autophagy - animal	ko04140
			Adipocytokine signaling pathway	ko04920
			Oxytocin signaling pathway	ko04921
			Longevity regulating pathway	ko04211

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network