Detail information of g389882
| Gene | Chr | Start | End | Strand |
|---|
| g389882 | Scaffold_75487:HRSCAF_458573 | 904218 | 963426 | - |
| Database | accession number | e-value | annotation |
|---|
| nr | XP_010938177.1 | 1.8e-50 | zinc finger CCCH domain-containing protein 3 isoform X1 |
| Swissprot | Q0JP11.2 | 5.1e-37 | Zinc finger CCCH domain-containing protein 3 |
| trEMBL | A0A6I9S647 | 1.3e-50 | zinc finger CCCH domain-containing protein 3 isoform X1 |
| TAIR id | % identity | e-value | bit
score | gene aliases | Short description |
|---|
| AT5G26749.1 | 46.45 | 2e-31 | 130 | | C2H2 and C2HC zinc fingers superfamily protein |
>>>Show top 3 blast result 
| Query id | Subject id | alignment
length | mis
matches | gap openings | query
start | query
end | subject
start | subject
end | % identity | e-value | bit
score |
|---|
| g389882 | AT5G26749.1 | 155 | 69 | 5 | 1 | 149 | 1 | 147 | 46.45 | 2e-31 | 130 |
| g389882 | AT5G26749.2 | 174 | 69 | 6 | 1 | 149 | 1 | 166 | 41.38 | 8e-28 | 119 |
| Pfam ID | Pfam name | type | alignment_start | alignment_end | bit_score | Evalue |
|---|
| PF06220.9 | zf-U1 | Domain | 5 | 39 | 35.6 | 5.1e-09 |
| PF00642.21 | zf-CCCH | Family | 62 | 83 | 27.7 | 1.7e-06 |
| KO | Name | Enzyme ID | Pathway | Pathway ID |
|---|
| K13152 | ZMAT5; U11/U12 small nuclear ribonucleoprotein 20 kDa protein | EC:- | - | - |