result

Gene information

Detail information of g390327

Location

Gene	Chr	Start	End	Strand
g390327	Scaffold_75543:HRSCAF_458629	67810	69827	+

Sequences

CDS

Protein

Gene

>g390327.t1
ATGATGCTGGGTTGTCATGGAATCTCTCTAGATGCCTCCATCCCTCTAAGAAACACAATAGGTATTTTTGGTTAAATTGGGTAGTTTGGAACTCATGCTCTTTTGGAAAGTCGGTTAGTCAAAACGTATAATGTTTAAAATCCAGACTTTTAGTCCAATTCTAGCAAAAAAGACAACTATATCGTCTTCCTTGCTTGTTGTCTAATAATAACATAGACAGTAACATAGCACCAAATGACTTCACGTTCAAAACGCAAGGATTGTTGTACTGATTGTTAGCTTTGTGGCAGTGATTTCTTGCATTTGTTAATTACATTACAATGCAAATGAAGGCTAACACAAACATAATATTCATGCTATTATTTTTATTTTATTTAAATTTGTAGAGTGGAGAATTTGATAGAATAGGTATTAGAAAAGTAAGGAGATGGGGCTATTTAGGTAATTGAGAGTGAAGAGGCAGAGTCCCCATGTGTAGAATTTCAAGTGGGAATAACTTGCTAAGTATTATCATTTGAACCGTAGATATAGAGTGGCAGATTCCTTTTATCAAGGATTTTTCAATATAGGTTGCTCCTACTTAAAACTGTAAACATGTAAAATTCTAAATATTGTAAAATATATCATATGTTTATTTGCAGCAGTCTATGGTTTAAGGTAGAGTCTAAACTGTCTAGTCTTTGGTAACTAGTGGTTGTTAATTTGATCGGGATGGTATATATTTGCCAAACTAATTAAGATGATGAGTAAAGAACAGCCACTGGACTTCATTTTTGTGAAATTGTTCAAAAAAGCTTGTTTCTATATCTTTTAGTCAGGATTCATGATATAATTTAAGATTTAAGGTTAATAAGGCAAAGGTTAGCTAAAAGTAGCTGTTGTTTAGAATGTTTTTTTTGAAGTAGCATGTGAAATTAATGAGAAATTTGAATTATAACACAATGCATTGTAGATGGTATGAAGGTGGGTGATAAGCTACCATTCGGCCATCATGTGATTAGTTTTGTATGTTTATGCACCTTACATGATTGTATATTCATATTATATATGATCGGTTTTGTTTCTCTTATAATTAGAGATCTTTTGTTTGCGATATTTATATATAAAATGTTGTTTTTAGTGAAGTTACTTGATTGGGGTGAAGAAGGTACTAGATCAAAAGCTGAAATCGCTGCCCTTCGATCTGCATTTTCCCAAGAAGTAGCTGTTTGGCACAAGCTTGATCATCCAAATGTTACAAAGGTTTTATTTTCTTGATTCACATCTGATAACATTGACAATTGATTATGATTTTTAACATTTTTTAAATCCATGAAATTTGATGACATTAAATGACCTGAAGTGGTATGATGTTAATTTATTAACTCTGTTCTGTTTATTGGATAAGTTTTTATGTTAATTTTCTGTTTGAAATATAATTACCGTACACATAATTGTAGTGTAAGAACGTATGTGTGTAGTTAAATTTATATATTTTTCAAGGATATAATTAATAAAACTCTTTTATCATTAGAAACTTGTGGTAATTCCAATTGCATGATCTGTGTAGTTTATAAGAGCTACAATGGGTGCAACCGGCCATACTATTCAAACTGAGAATCATACCCACTAGTTTATGCTATGTTGTAGTAGAATATCTTCTTGGCGGTACACTAAAATCCTATCTAATTAAGAATCGAAGACGAAAGCTAGCGTTCAAAGTTGTTCACCAGCTAGCTCTTGATCTTGCAAGAGGGTGAGCTTACTTTAATACCCTCTTTTCTAAGCTTTTCATAAATTATAACTTGTAGGTGAGCTTTAATCTTATCAGTATGTGTACCTTTGTGCATGCTGTGCAGGTTGAGTTACCTGCACTTAAGGAAATTGTGCACATAGATGTGAAGACAAAAAATATGCTTTTGGATAAGTCAAGAACTATAAAAATATGCAAGACTATCGCAAGACTGATGCTGAAGCAAGATGAAGCCAAGGCTGAAGGGTTCAAGAAGTACAGGTGCTGGAAAGACATGCTAGAGTAG

Functional annotation

Database	accession number	e-value	annotation
nr	XP_020256651.1	1.6e-32	serine/threonine-protein kinase HT1-like
Swissprot	Q2MHE4.1	3.8e-07	High leaf temperature protein 1
trEMBL	A0A218VZA2	2.5e-32	serine/threonine-protein kinase STY13-like

Best hit in Arabidopsis

TAIR id	% identity	e-value	bit score	gene aliases	Short description
AT5G50000.1	61.98	2e-35	144		Protein kinase superfamily protein

>>>Show top 3 blast result

Query id	Subject id	alignment length	mis matches	gap openings	query start	query end	subject start	subject end	% identity	e-value	bit score
g390327	AT5G50000.1	121	21	1	17	112	104	224	61.98	2e-35	144
g390327	AT3G01490.1	121	22	1	17	112	130	250	61.16	2e-34	140
g390327	AT3G22750.1	135	42	1	4	112	83	217	49.63	2e-31	131

Ortholog group

Species	Genes
Allium cepa	g390327.t1
Allium fistulosum	AfisC8G01990
Allium sativum
Arabidopsis thaliana
Oryza sativa

Pfam domain

Pfam ID	Pfam name	type	alignment_start	alignment_end	bit_score	Evalue
PF07714.14	Pkinase_Tyr	Domain	41	111	31.8	7.5e-08

Gene Ontology

Accession	Ontology	Name
GO:0005622	C	intracellular
GO:0005575	C	cellular_component
GO:0008152	P	metabolic process
GO:0003674	F	molecular_function
GO:0003824	F	catalytic activity
GO:0004672	F	protein kinase activity
GO:0007165	P	signal transduction
GO:0035556	P	intracellular signal transduction
GO:0005623	C	cell
GO:0005737	C	cytoplasm
GO:0006464	P	cellular protein modification process
GO:0006468	P	protein phosphorylation
GO:0006793	P	phosphorus metabolic process
GO:0006796	P	phosphate-containing compound metabolic process
GO:0006807	P	nitrogen compound metabolic process
GO:0007154	P	cell communication
GO:0008150	P	biological_process
GO:0009987	P	cellular process
GO:0016301	F	kinase activity
GO:0016310	P	phosphorylation
GO:0016740	F	transferase activity
GO:0016772	F	transferase activity, transferring phosphorus-containing groups
GO:0016773	F	phosphotransferase activity, alcohol group as acceptor
GO:0019538	P	protein metabolic process
GO:0023052	P	signaling
GO:0036211	P	protein modification process
GO:0043170	P	macromolecule metabolic process
GO:0043412	P	macromolecule modification
GO:0044237	P	cellular metabolic process
GO:0044238	P	primary metabolic process
GO:0044260	P	cellular macromolecule metabolic process
GO:0044267	P	cellular protein metabolic process
GO:0044424	C	intracellular part
GO:0044464	C	cell part
GO:0050789	P	regulation of biological process
GO:0050794	P	regulation of cellular process
GO:0050896	P	response to stimulus
GO:0051716	P	cellular response to stimulus
GO:0065007	P	biological regulation
GO:0071704	P	organic substance metabolic process
GO:1901564	P	organonitrogen compound metabolic process
GO:0140096

KEGG pathway

KO	Name	Enzyme ID	Pathway	Pathway ID
-	-	-	-	-

Expression pattern in different tissues

Expression pattern in BioProjects

Co-expression network