Detail information of g390396


Location
GeneChrStartEndStrand
g390396Scaffold_75556:HRSCAF_4586429111292099-



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrXP_020243700.11.7e-71LOW QUALITY PROTEIN: transcription factor DIVARICATA-like
SwissprotQ8S9H7.13.8e-60Transcription factor DIVARICATA
trEMBLA0A8B7BU632.4e-67transcription factor DIVARICATA isoform X1

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT2G38090.158.595e-61 230Duplicated homeodomain-like superfamily protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag188489.t1; g218120.t1; g223069.t1; g228004.t1; g246148.t1; g389580.t1; g389581.t1; g390396.t1; g415027.t1; g529114.t1; g76021.t1; g96418.t1
Allium fistulosumAfisC1G00287; AfisC3G01635; AfisC3G04498; AfisC3G07071; AfisC4G00204; AfisC4G06645; AfisC5G05775; AfisC7G01624; AfisC7G01795; AfisC7G04795; AfisC8G00305
Allium sativumAsa2G01536.1; Asa2G03527.1; Asa2G05863.1; Asa3G01223.1; Asa4G00352.1
Arabidopsis thalianaAT2G38090.1; AT5G58900.1
Oryza sativaLOC_Os01g04930.1; LOC_Os01g63460.1; LOC_Os05g37730.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00249.28Myb_DNA-bindingDomain337933.43.4e-08
PF00249.28Myb_DNA-bindingDomain13117545.26.7e-12

Gene Ontology
AccessionOntologyName
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KEGG pathway
KONameEnzyme IDPathwayPathway ID
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Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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