Detail information of g393604


Location
GeneChrStartEndStrand
g393604Scaffold_75995:HRSCAF_45908112167141252195+



Sequences
CDS
Protein
Gene

Functional annotation
Databaseaccession numbere-valueannotation
nrONK69357.11.3e-110uncharacterized protein A4U43_C05F22010
trEMBLA0A5P1EW099.2e-111SET domain-containing protein

Best hit in Arabidopsis
TAIR id% identitye-valuebit
score
gene aliasesShort description
AT3G07670.167.641e-102 369Rubisco methyltransferase family protein

>>>Show top 3 blast result


Ortholog group
SpeciesGenes
Allium cepag393604.t1
Allium fistulosumAfisC6G04077
Allium sativumAsa8G03003.1
Arabidopsis thalianaAT3G07670.1
Oryza sativaLOC_Os02g49326.1

Pfam domain
Pfam IDPfam nametypealignment_startalignment_endbit_scoreEvalue
PF00856.25SETFamily8925924.62.5e-05

Gene Ontology
AccessionOntologyName
GO:0005622Cintracellular
GO:0005575Ccellular_component
GO:0005623Ccell
GO:0005737Ccytoplasm
GO:0043231Cintracellular membrane-bounded organelle
GO:0009507Cchloroplast
GO:0009536Cplastid
GO:0043226Corganelle
GO:0043227Cmembrane-bounded organelle
GO:0043229Cintracellular organelle
GO:0044424Cintracellular part
GO:0044444Ccytoplasmic part
GO:0044464Ccell part

KEGG pathway
KONameEnzyme IDPathwayPathway ID
K19199SETD3; protein-histidine N-methyltransferaseEC:2.1.1.85 --

Expression pattern in different tissues

Expression pattern in BioProjects

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Co-expression network

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